Os01g0783800

From RiceWiki
Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0783800| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001050992.1 GI:115440354 GeneID:432706...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0783800

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001050992.1 GI:115440354 GeneID:4327060

Length

6084 bp

Definition

Oryza sativa Japonica Group Os01g0783800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34966077..34972160

Sequence Coding Region

34967227..34968514,34968616..34968723,34968834..34969021,34970873..34971083,34971187..34971424
,34971525..34971675,34971743..34972042

Expression

GEO Profiles:Os01g0783800

Genome Context

<gbrowseImage1> name=NC_008394:34966077..34972160 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34966077..34972160 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgtggaaaaggagctcttgcagggaagttattactttgctgattatgtctttgtggttagaaagatgtttaggaacagacagcatctctgcaaatgaaacacttccagatgggcagaccatagtgtccatgaaaaatgtgtttgtacttggtttctttagccctggagcttcaagtcatcgatatgttggtatatggtacagcaacccagtaaatagaacaatcgtatgggttgctaacaggaacgaaccactattagatgcttcaggagtccttatgtttgatgttaatggaaacctggtcattgcgcatggaggcagatcactcatagtggcttatggacaaggaaccaaagacatgaaagccacaatcctggattctggtaatcttgccctgagcagcatggctaacccatcaaggtatatatggcagagttttgattctcctactgatacatggctccctgaaatgaagattggactcaggacaacaaaccaaacactcatttcatggtcgagcattgatgacccagcaatgggggattacaaacttggaatggatcctgctgggctgtcacatcctgctgggctgtcacaattcattgtctggtggagagggaataatttttggaccagtggacactggagtggtgacatgttttctctcatcccagaactaaaattttttaccaccatcccaattttcttcaaatgtaacaattctaccaatgacatcacttgcacatactctgctaacccatccgataggatgacaaagattgttttgaattcaactggatcattaagcatcatgcagtttgattctcttgagaaatcatggattttgttatggagacagccaagtacttgtgaagttcataacctatgtggagcttttggtatatgcaatgacaatgatgcagtgcctaagtgttattgtacaaaaggatttgttccacaggacataatagcatatactaatgggtataccagggagggctgcaacaggcagaccaagctgcaatgtagcagtgacgagttctttgagattcctaatgtacggcttcctgataatagaaagaagctgcctgttatgggtcttagtgagtgcaaactggcatgtttgatgaactgctcttgtacagcttatgcttatttgcagttggatggatgcagcttgtggtatggtgatcttatgaacttgcaggatggttatgatgttcatggtgcaggaactctatgccttcgtctggcagcgtcagaagtagaatctggaagaaactcaggctcgggtcacaaaatgctttggatggcgtgtgtgattccacctgttgtagttctttccttttgctccctttcctttgttctttggagaagacggagtcaaaacaaaggtaaagaaaatttacatgctcaccactccttgatgactctggatacggacagtgcagtcaaactttgggagagtgaagaagcaggttctcagtttgtgctgttttccttctcccaaatagcaaattccaccaacaacttttcagctcaaaacaagcttggtgagggggggtttggtcctgtgtacaagggaaacttacctgataggcaggatattgctgtcaagaggcttgcaacaaattcgggacaagggttagttgaatttaagaatgaggtcctgctgatagcaaaacttcaacacgtaaatttggttaggcttttaggctgctgcatccaaggggaagaaaagatacttatctacgagtacatgccaaataaaagcttggatttcttcctctttgaaaaatcaagaagtgtggtattggactggagaaagcgaatacatataattgaaggaattgctcatggtcttctttatcttcacaaacattctagactgagaattattcatagggacttgaaagcaagcaacattctgttagacattgatatgaaccctaagatctctgattttggcttggcgagaatatttggctctaaagaaactcaagctaatacaaacagggttgttgggacatatggttacatggctcctgagtatgccatgcaaggcattttctcggttaagtctgatgtgtttagctttggggtgttgcttttggagatcgtcagcggaatgagaaatgcaggatcccaccgacgtgggcgctctcttaacctccttggtcatgcctgggagttatggagggaaggcagatggtttgatctcgttgatccatcaacacgtgatgcatatcctgagcatagggtactgagatgtgttcatgttggcctgatgtgcgtccaagagaacgctgttgatcgtcccactatgagcgatgtcatctcaatgcttactagcgaaagcatcaccttacctgatcctaggcagcctgctttcctctccattgtgcttccagccgaaatggatgcccatgatggatccttttctcaaaatgcaatgacaattactgatctggagggtagataa</cdnaseq>

Protein Sequence

<aaseq>MMWKRSSCREVITLLIMSLWLERCLGTDSISANETLPDGQTIVS MKNVFVLGFFSPGASSHRYVGIWYSNPVNRTIVWVANRNEPLLDASGVLMFDVNGNLV IAHGGRSLIVAYGQGTKDMKATILDSGNLALSSMANPSRYIWQSFDSPTDTWLPEMKI GLRTTNQTLISWSSIDDPAMGDYKLGMDPAGLSHPAGLSQFIVWWRGNNFWTSGHWSG DMFSLIPELKFFTTIPIFFKCNNSTNDITCTYSANPSDRMTKIVLNSTGSLSIMQFDS LEKSWILLWRQPSTCEVHNLCGAFGICNDNDAVPKCYCTKGFVPQDIIAYTNGYTREG CNRQTKLQCSSDEFFEIPNVRLPDNRKKLPVMGLSECKLACLMNCSCTAYAYLQLDGC SLWYGDLMNLQDGYDVHGAGTLCLRLAASEVESGRNSGSGHKMLWMACVIPPVVVLSF CSLSFVLWRRRSQNKGKENLHAHHSLMTLDTDSAVKLWESEEAGSQFVLFSFSQIANS TNNFSAQNKLGEGGFGPVYKGNLPDRQDIAVKRLATNSGQGLVEFKNEVLLIAKLQHV NLVRLLGCCIQGEEKILIYEYMPNKSLDFFLFEKSRSVVLDWRKRIHIIEGIAHGLLY LHKHSRLRIIHRDLKASNILLDIDMNPKISDFGLARIFGSKETQANTNRVVGTYGYMA PEYAMQGIFSVKSDVFSFGVLLLEIVSGMRNAGSHRRGRSLNLLGHAWELWREGRWFD LVDPSTRDAYPEHRVLRCVHVGLMCVQENAVDRPTMSDVISMLTSESITLPDPRQPAF LSIVLPAEMDAHDGSFSQNAMTITDLEGR</aaseq>

Gene Sequence

<dnaseqindica>1151..2438#2540..2647#2758..2945#4797..5007#5111..5348#5449..5599#5667..5966#aaggtccatcaaacgctgccccctgctgggaccggctcggccatggctcgtcggtggcggcggcggaggaggagaggaggaggaggaggaggtggaggaggaattgcaggtgaggtgatattctcacgcttaggacctagtgatgtcctactagcatcgttttatccaagcgccccttctcggtttcgtatcgtcttgtccgcgaggccagtgcctgcaagcctttcaagtgtcgtgaatgcttttggtttggtgaatcgctctaattgtttcccgtattcctgcagatcgaaaccggtgcactgtgcttgcaacaaaaattgtggctacagaactctgtcaatggaaggagtagggagatgctacaatagaaatgattttttttccttttttttttcagggatacaacagaaaggagttggtggaagagtgaaattggaatttattattctccaattattttctgtgaatctgttctcaaatgtagacaacatatcgtggggcagataaaccggtggaaattctctgtgccaccaatgatacaagtacttgagttgatggatagtcacttcccagtcaacacaggagaattggtttgatgctttgatgttgatggtaccaccatggagaatgcaagtaagaagaaaggtatttatgggttaatggtgccaccactgcgatcagaagagttcaaacagttagtcacatggtcaaaattcagctattgggccaaaagaactacatccattcttgacctagtcaataagcagcacttattcaatcaattattgtcttattgttgttcaatgtcatgtcatagattagtttccttggcatgtgttgaccgcaagtctgcaacgtagacttcacggtaaaacaccatatgaagttcaagctgacaactctcaatgtattgtccagagaagttttgttatttggaactgcggcgaaaggaatttccacgctttatttccaacctgtccttcggatgaatctagaggtgtgctaatatgcttgtattctttgcttattccttcatttcaatccctattcatcactttagttgtgtttttcttttctgttacttaaccgtctttcaaatacaatttgttttggttcaaaactagctgattggtcttttctgggagccatgatgtggaaaaggagctcttgcagggaagttattactttgctgattatgtctttgtggttagaaagatgtttaggaacagacagcatctctgcaaatgaaacacttccagatgggcagaccatagtgtccatgaaaaatgtgtttgtacttggtttctttagccctggagcttcaagtcatcgatatgttggtatatggtacagcaacccagtaaatagaacaatcgtatgggttgctaacaggaacgaaccactattagatgcttcaggagtccttatgtttgatgttaatggaaacctggtcattgcgcatggaggcagatcactcatagtggcttatggacaaggaaccaaagacatgaaagccacaatcctggattctggtaatcttgccctgagcagcatggctaacccatcaaggtatatatggcagagttttgattctcctactgatacatggctccctgaaatgaagattggactcaggacaacaaaccaaacactcatttcatggtcgagcattgatgacccagcaatgggggattacaaacttggaatggatcctgctgggctgtcacatcctgctgggctgtcacaattcattgtctggtggagagggaataatttttggaccagtggacactggagtggtgacatgttttctctcatcccagaactaaaattttttaccaccatcccaattttcttcaaatgtaacaattctaccaatgacatcacttgcacatactctgctaacccatccgataggatgacaaagattgttttgaattcaactggatcattaagcatcatgcagtttgattctcttgagaaatcatggattttgttatggagacagccaagtacttgtgaagttcataacctatgtggagcttttggtatatgcaatgacaatgatgcagtgcctaagtgttattgtacaaaaggatttgttccacaggacataatagcatatactaatgggtataccagggagggctgcaacaggcagaccaagctgcaatgtagcagtgacgagttctttgagattcctaatgtacggcttcctgataatagaaagaagctgcctgttatgggtcttagtgagtgcaaactggcatgtttgatgaactgctcttgtacagcttatgcttatttgcagttggatggatgcagcttgtggtatggtgatcttatgaacttgcaggatggttatgatgttcatggtgcaggaactctatgccttcgtctggcagcgtcagaagtagaatctggaagaaactcaggtaagtattgtatctgtagaaagactgcaagaattcagcatatatcatgaaaagtctcagttatctgcaagtagagttgtttatgatatcaaattctgtaggctcgggtcacaaaatgctttggatggcgtgtgtgattccacctgttgtagttctttccttttgctccctttcctttgttctttggagaagacggagtcaaaacaaaggtaccaatattaactcatcataactgcaaactgatgataaaaactgcatgcaataactatgcacagcaggtataacacatgaggaggattattttgttattgtgcatcaggtaaagaaaatttacatgctcaccactccttgatgactctggatacggacagtgcagtcaaactttgggagagtgaagaagcaggttctcagtttgtgctgttttccttctcccaaatagcaaattccaccaacaacttttcagctcaaaacaagcttggtgagggggggtttggtcctgtgtacaaggtaaccttttcttcaatttcgtactatctgacttattagctggcatgctgaagttagatttgtgtctggggcctctgggtttgcaatctacatctgcagattcagttttaagcaagcaacagtagtgaaggcccggtgaattgatgcctgggcttgcaatctacacctgcagatttagttttagccaagtaacagtagtgatgacccctaccaatataccacacaattcaataaatttggattttggagagctagaggaatggaatatataattattccaaccatgaagcctgagttcttttctattttaggggagacagatctgagtggaataatctttcgggaatatatttctttgttatgtacacaaaatgtacaagtggataaccaacccctgcttgacaagtcacatcaaataaaacctgtcgtagcacctctacttattacacaatggtattcgcaatagaactagcgctaacttgaggtgtagtggcttaggagtgttcccctcaaactcaagcatgcaaggcaacttttcaccataaacatctaatataactcgagttagattaaacatctaatataactcgagttaggaatgatcagtttgtttaaacatcacgagtttgcaagcacaacagagtttgttcaagccagtggtcaaagatggtagcctgtaagcttttcataattgatgttgtgaccaaagttcattgccccttttgttgggagggctataggggaatttaggtaggtgggtactactgaagcggtatggggcaaaagagcaattgagttggtgtcggaaaaaaaacaggtgagaatgagaaactagagggaaaggagttgttttttgtttggtgggggatgagtagtagggtggtgtgagaaacgcctaggggtcttccggctagctccacaaagtggtgggctagacgacctgggttcgaagcctcaccccttctaattatttgatattaagtccttccctaatattcgtgtctttttgagtagtagggtggtgtaatcacagtaaactttgcgaagttgactatgggcagtgacttaccaagttcagagcctcatgtctcttatgtcattaattaactagcaaaataaaaaaaatctacctaatccctgtgaagtatgcttattcgtccacttagccttcttagacctcgtctggatgggtctcaatccctggcgatccatggctgggattttgaactaaaaacctggcccttataacaaggtctcaagtgcataatcaggtattttatcccttgactgtgtaaggaggtaattttgcctctgtgtcaaataacatggctgacacattaccatcacgttatgttaaaaaataataaggtccacttgttaagttgtcagaggcaagcttaattccccttcaaaaattcctcggcaggacctactcatcactttgatatagagactgattgttaattaaaatatttttagttgccgagttggtcttaattgctccaaatcatgtcctgtgtgactgtcaaaaccgctcaacgtcactggccacgtgtcaaaaccatctccaaaacccagcccagaggattaaatagactttttcccataaacaaaacttgatacattagtttacaagattatttgcaataaattgtgtacagttgaacatatcaccctctttatttaatatcgatactcatttgtgcttcatgtcaagcaacagttatgctgtttttacaaatacatcttagatttaagagcatcaggccaccaaagtgcaagttctgtggcattcagttattttgccttgaaacagtctctacgatttaaccttttcgaaccattatccagggaaacttacctgataggcaggatattgctgtcaagaggcttgcaacaaattcgggacaagggttagttgaatttaagaatgaggtcctgctgatagcaaaacttcaacacgtaaatttggttaggcttttaggctgctgcatccaaggggaagaaaagatacttatctacgagtacatgccaaataaaagcttggatttcttcctctttggtgtgttctcttttcctttcttaatgtatgtcctttatcccccaccccttaccccttcccaatagctttctttaaataactagtttgttgtgtcttcttaaagaaaaatcaagaagtgtggtattggactggagaaagcgaatacatataattgaaggaattgctcatggtcttctttatcttcacaaacattctagactgagaattattcatagggacttgaaagcaagcaacattctgttagacattgatatgaaccctaagatctctgattttggcttggcgagaatatttggctctaaagaaactcaagctaatacaaacagggttgttgggacatagtaagtattgcctgcttcaaatttgcattcggcacatacactgaataggtgcattgacaaatggatgttgaattcactggactattgttttttttttcagtggttacatggctcctgagtatgccatgcaaggcattttctcggttaagtctgatgtgtttagctttggggtgttgcttttggagatcgtcagcggaatgagaaatgcaggatcccaccgacgtgggcgctctcttaacctccttggtcatgtcagtagtctctacatttctgaaacaatgtcacaaataaatagctagctgatactgaacttttcaggcctgggagttatggagggaaggcagatggtttgatctcgttgatccatcaacacgtgatgcatatcctgagcatagggtactgagatgtgttcatgttggcctgatgtgcgtccaagagaacgctgttgatcgtcccactatgagcgatgtcatctcaatgcttactagcgaaagcatcaccttacctgatcctaggcagcctgctttcctctccattgtgcttccagccgaaatggatgcccatgatggatccttttctcaaaatgcaatgacaattactgatctggagggtagataataatatcatgtccacctgtccagcatatgctgttcttaaagcttgatcaaatccatttggcataatgtattgtatgttcttacagctggacatgcttattgattgacagagaaaaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0783800, RefSeq:Os01g0783800