Os01g0784200

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0784200| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001050995.1 GI:115440360 GeneID:432703...")
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Gene Name

Os01g0784200

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001050995.1 GI:115440360 GeneID:4327035

Length

4120 bp

Definition

Oryza sativa Japonica Group Os01g0784200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34983498..34987617

Sequence Coding Region

34983498..34984809,34985961..34986322,34986451..34986661,34986762..34986999,34987080..34987230
,34987321..34987617

Expression

GEO Profiles:Os01g0784200

Genome Context

<gbrowseImage1> name=NC_008394:34983498..34987617 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34983498..34987617 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacacgtgcgccgcgctctctcctcccgctgctcttcgtcgccgccgccgttgccttcttctcacgcgccgctaccgccgccgacgtcatcggccaggccgggttcatcaccggcaaccagacgctcgtctcgtccggtggcgtctttgagctcggtttcttcgtcccgaatggcgccaccgacggcaggacgtatctcggcatttggtacgccagcatccccggccagaccgtcgtgtgggtcgccaaccggcaggaccctgtcgtcaacgtccccgccgtcgccaggctgtccgccgacggccgccttgtcatcgccgacgcgaagaacaccaccgtgtggtcgtccccggctccggcgaggaacgtaaccgccgccggcgccaccgctcggctccaggacgacggcaacctcgtcgtgagctccgggtctcccggaagcgtggcgtggcagagcttcgactacccgacggacaccctgctcccggggatgaagctcggggtggacgtcaagaacggcatcaccaggaacatgacgtcgtggacgagctcgtccgacccctcgccggggtcgtacacgttcaagctcgttcccggcggcctgccggagttcttcctcttccgcggcccggcgatgatctacgggagcgggccgtggaacggcgcggagctcacgggcgtgccggacctcaagtcccaggacttcgccttcacggtggtctcgagccccgacgagacgtactacagctactccatcctcaacccgtcgctgctctcccggttcgtggccgacgcgacggcggggcaggtgcagcgcttcgtgtggatcaacggcgcgtggagcagcttctggtactacccgaccgacccgtgcgacggctacgccaagtgcggggcgttcggctactgcgacaccagcacgcccacgctgtgcagctgcctgccggggttccagccgcggtcgccgcagcagtggggcctccgggacgcgtcgggcgggtgcgtcttgacggccaacctcacctgcgacggcgccggcgacgggttctggacggtgaacaggatgaagctgccggcggcgacgaacgcgacggtgtacgccggcatgacgctggaccagtgcaggcaggtgtgcctgggcaactgcagctgcagggcgtacgccgcggcgaacgcaagcggcggggtcagccgcgggtgcgtcatctgggccgtcgatctgctggacatgaggcagtactccggggtcgtgcaggatgtctacatccggctcgcgcagtccgaggtagacgccttgaacgccgcagctaacagcgagcatccgagcaacagcgcggtgatcgccgtcgtcgtcgcgaccatttccggtgttctcctgcttggagcagttggcggctggtggttttggaggaacagggtgaggacgaggaggaacgagacggcggcggcggcggccggcggtggagatgacgtgctcccgttcagggtcaggaaccagcagcaccctgcctcgagcgtgaaacgggatcaacggctggatgtgaagagggagtgtgacgaaaaagatctcgaccttccgttgcttgatctgaaggcgatcgttgccgccacggacgacttcgccgcgagcaacaagatcggggaaggcggattcggaccggtttacatggggaagctggaggatgggcaagaagtagctgtgaagaggttatctagaagatcagtacaaggggttgtggagttcaagaatgaggtcaaactgatagccaagcttcagcacaggaaccttgtcaggctattgggctgctgcatcgatgacgatgagaggatgcttgtttacgagtacatgcacaaccagagcctagacactttcatatttgatgaaggaaaacgtaagctgctaagatggagcaaacggtttgagatcattgtcggggttgcacggggtctgctctacctccacgaagattcaaggtttagaatcatccacagggatttgaaggcaagcaacgtgttgctagacagaaacatggtgcccaagatctcagactttgggattgcaaggatgtttggaggtgatcagaccactgcatacactagaaaggtcatcggaacatatggctacatgtccccggagtatgcaatggacggcgtgttctccatgaaatccgatgtctatagctttggtgtcctagtgctagagatcgtcactggcagacggaaccgaggattctacgaagccgagctcgatctcaacctcctcagatactcatggttgctgtggaaagaaggcaggagcgttgatttactggaccagctgttgggcggcagcttcgactacagcgaggtgttgagatgcatccaggttgctctcctgtgtgttgaagtgcaacctagaaacagaccgttgatgtcttcggtcgttatgatgctagccagtgagaatgctacattgccggaaccaaatgagcctggagtaaacattgggaggcacgcgtcagacacggagtcatccgaaacccttaccgtcaatggtgtgactataactgcaatagagtgtagatag</cdnaseq>

Protein Sequence

<aaseq>MSTRAPRSLLPLLFVAAAVAFFSRAATAADVIGQAGFITGNQTL VSSGGVFELGFFVPNGATDGRTYLGIWYASIPGQTVVWVANRQDPVVNVPAVARLSAD GRLVIADAKNTTVWSSPAPARNVTAAGATARLQDDGNLVVSSGSPGSVAWQSFDYPTD TLLPGMKLGVDVKNGITRNMTSWTSSSDPSPGSYTFKLVPGGLPEFFLFRGPAMIYGS GPWNGAELTGVPDLKSQDFAFTVVSSPDETYYSYSILNPSLLSRFVADATAGQVQRFV WINGAWSSFWYYPTDPCDGYAKCGAFGYCDTSTPTLCSCLPGFQPRSPQQWGLRDASG GCVLTANLTCDGAGDGFWTVNRMKLPAATNATVYAGMTLDQCRQVCLGNCSCRAYAAA NASGGVSRGCVIWAVDLLDMRQYSGVVQDVYIRLAQSEVDALNAAANSEHPSNSAVIA VVVATISGVLLLGAVGGWWFWRNRVRTRRNETAAAAAGGGDDVLPFRVRNQQHPASSV KRDQRLDVKRECDEKDLDLPLLDLKAIVAATDDFAASNKIGEGGFGPVYMGKLEDGQE VAVKRLSRRSVQGVVEFKNEVKLIAKLQHRNLVRLLGCCIDDDERMLVYEYMHNQSLD TFIFDEGKRKLLRWSKRFEIIVGVARGLLYLHEDSRFRIIHRDLKASNVLLDRNMVPK ISDFGIARMFGGDQTTAYTRKVIGTYGYMSPEYAMDGVFSMKSDVYSFGVLVLEIVTG RRNRGFYEAELDLNLLRYSWLLWKEGRSVDLLDQLLGGSFDYSEVLRCIQVALLCVEV QPRNRPLMSSVVMMLASENATLPEPNEPGVNIGRHASDTESSETLTVNGVTITAIECR </aaseq>

Gene Sequence

<dnaseqindica>1..1312#2464..2825#2954..3164#3265..3502#3583..3733#3824..4120#atgtcgacacgtgcgccgcgctctctcctcccgctgctcttcgtcgccgccgccgttgccttcttctcacgcgccgctaccgccgccgacgtcatcggccaggccgggttcatcaccggcaaccagacgctcgtctcgtccggtggcgtctttgagctcggtttcttcgtcccgaatggcgccaccgacggcaggacgtatctcggcatttggtacgccagcatccccggccagaccgtcgtgtgggtcgccaaccggcaggaccctgtcgtcaacgtccccgccgtcgccaggctgtccgccgacggccgccttgtcatcgccgacgcgaagaacaccaccgtgtggtcgtccccggctccggcgaggaacgtaaccgccgccggcgccaccgctcggctccaggacgacggcaacctcgtcgtgagctccgggtctcccggaagcgtggcgtggcagagcttcgactacccgacggacaccctgctcccggggatgaagctcggggtggacgtcaagaacggcatcaccaggaacatgacgtcgtggacgagctcgtccgacccctcgccggggtcgtacacgttcaagctcgttcccggcggcctgccggagttcttcctcttccgcggcccggcgatgatctacgggagcgggccgtggaacggcgcggagctcacgggcgtgccggacctcaagtcccaggacttcgccttcacggtggtctcgagccccgacgagacgtactacagctactccatcctcaacccgtcgctgctctcccggttcgtggccgacgcgacggcggggcaggtgcagcgcttcgtgtggatcaacggcgcgtggagcagcttctggtactacccgaccgacccgtgcgacggctacgccaagtgcggggcgttcggctactgcgacaccagcacgcccacgctgtgcagctgcctgccggggttccagccgcggtcgccgcagcagtggggcctccgggacgcgtcgggcgggtgcgtcttgacggccaacctcacctgcgacggcgccggcgacgggttctggacggtgaacaggatgaagctgccggcggcgacgaacgcgacggtgtacgccggcatgacgctggaccagtgcaggcaggtgtgcctgggcaactgcagctgcagggcgtacgccgcggcgaacgcaagcggcggggtcagccgcgggtgcgtcatctgggccgtcgatctgctggacatgaggcagtactccggggtcgtgcaggatgtctacatccggctcgcgcagtccgaggtagacgccttgaacgccgcaggtgagaaaattattacacatgatttacatcactgtgaaattcttatttctactttcttctcgaagggaacatcttatctagcgaccaatttagcattcattttcgcctcgtggaattagagcttagaaaaaatgttcatgttagcctgaagtgtcgacccaattctggtttctggcctagctagctgaataatagcttgtcctcactctcagtttttcctctgttttccctcccaaatataatcattttacgtgcactggcccattcacttgtctaagaaaaaccattattagttgacattttcctggtcaagaaatggttgcgcatgtaggccaaatttcaccactagccagcgctcttcaacccactgacacggactagttgctgtggccctttcctgatcccgtgatccactcctcaaacaagcaaattagcacaggtcaattagccgtacgtcaaccgtcattagttttgtgatactgcaccaaccattagtatctcccataccatgtaacgcattctctggattaggtgcggtgcagtcaaaacaacaaatgtccaacaccacccaacttgatagtgactctcaacagcgaaaagttgttctctggatatgctaatttataagagacacggattttctataactagatgtcatggcacccatcgtttgcatgcgacttaaatagttataagaaaaaaaattaaaaaaatagtagcatcaattgtgatgatgtaagtctatacacaaacatgcatgactaaatttgatatacaactagagaaacaaaaataataaaatcagacagtgaatagtacccgtatagtgcagataaaatttgttattttttctttatatgtcaatcgaatttagacttgcatgtttgtatattgtcttatattattatagtctatcttatcaaattttatgaaacttttatataactgtttaaattacatgcatacacctatgtgtcatggcacctagatgtaaaaaaatactttctcaatttatgagcaagcacttgacactccacagcagtacagatacaaagttttgaaaatcacacctggcatgtaaacacgacatacacaaagcccgtcagaaacacgggttttgccggttctcacttctcactgcttggtttcagctaacagcgagcatccgagcaacagcgcggtgatcgccgtcgtcgtcgcgaccatttccggtgttctcctgcttggagcagttggcggctggtggttttggaggaacagggtgaggacgaggaggaacgagacggcggcggcggcggccggcggtggagatgacgtgctcccgttcagggtcaggaaccagcagcaccctgcctcgagcgtgaaacgggatcaacggctggatgtgaagagggagtgtgacgaaaaagatctcgaccttccgttgcttgatctgaaggcgatcgttgccgccacggacgacttcgccgcgagcaacaagatcggggaaggcggattcggaccggtttacatggtaagataaagaatcagacagcacgcaaatatcacccttttttcagacaaacgaaaaacagtcaaattgccaaataacctttgccgacgaatgtgattggtgattcactgcttctgtgcctacaacaggggaagctggaggatgggcaagaagtagctgtgaagaggttatctagaagatcagtacaaggggttgtggagttcaagaatgaggtcaaactgatagccaagcttcagcacaggaaccttgtcaggctattgggctgctgcatcgatgacgatgagaggatgcttgtttacgagtacatgcacaaccagagcctagacactttcatatttggtcagttcatatatacttgcagaaacacctgtttgcataactaatttgctaaaatgcatatggtatttaccttctcaaactccttacatacattgaacagatgaaggaaaacgtaagctgctaagatggagcaaacggtttgagatcattgtcggggttgcacggggtctgctctacctccacgaagattcaaggtttagaatcatccacagggatttgaaggcaagcaacgtgttgctagacagaaacatggtgcccaagatctcagactttgggattgcaaggatgtttggaggtgatcagaccactgcatacactagaaaggtcatcggaacatagtgagttttctctcctaatccctgtctgtataagtatgttgttctgaaaattagacttaacacatgagttggttttccagtggctacatgtccccggagtatgcaatggacggcgtgttctccatgaaatccgatgtctatagctttggtgtcctagtgctagagatcgtcactggcagacggaaccgaggattctacgaagccgagctcgatctcaacctcctcagatacgtaagtaacgttagctattaattcctgcaaatagtttttttttcccaatcttgtcacaatatgtttatagccatttcgatcatttttcagtcatggttgctgtggaaagaaggcaggagcgttgatttactggaccagctgttgggcggcagcttcgactacagcgaggtgttgagatgcatccaggttgctctcctgtgtgttgaagtgcaacctagaaacagaccgttgatgtcttcggtcgttatgatgctagccagtgagaatgctacattgccggaaccaaatgagcctggagtaaacattgggaggcacgcgtcagacacggagtcatccgaaacccttaccgtcaatggtgtgactataactgcaatagagtgtagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0784200, RefSeq:Os01g0784200