Os01g0784600

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0784600| Description = Conserved hypothetical protein| Version = NM_001050997.1 GI:115440364 GeneID:4327037| Length = 3323 bp| Definition ...")
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Gene Name

Os01g0784600

Description

Conserved hypothetical protein

Version

NM_001050997.1 GI:115440364 GeneID:4327037

Length

3323 bp

Definition

Oryza sativa Japonica Group Os01g0784600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35000623..35003945

Sequence Coding Region

35000986..35001057,35001309..35001556,35001651..35001909,35003248..35003427,35003510..35003791

Expression

GEO Profiles:Os01g0784600

Genome Context

<gbrowseImage1> name=NC_008394:35000623..35003945 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35000623..35003945 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggcaggaagagagaaggataggtcggtggtggtggtggtagaggatttgggcacagccactaaggatacagtcaacccaagcgcgaagtctacaaggaggtaccctctcctgtcatggacaactatattggccttgatcgcgcttgtcggagtatacattttctcagtgtctttgaagcaaaatgggatgcttcttggtcttaagcagacagacatgatagaaaaagaaagggaaaaactttgccaggaccccagcattccggtgactgagatcccttatgtgcattatcccacacctgatacttacagtaggaaagaatgtgcatgcacaccagttagattcttcgctatcttgtcgatgcagaggtcaggaagtgggtggattgaaacattattgaatagccatgagaacattagctccaatggagagattttctctatcaaggaaaggcgtagtaatatcacttcgatcacaaaaacattggataaattgtacaatctggactggctcagcagtgctgctaaaaatgaatgtactgcagcagtggggttgaaatggatgctgaatcagggtctagtgcaacatcatgaagaggtagttgaatacttcaaccgaagaggcgtgtctgcaatcttccttttaagaagaaatactctccagcgttatgtctctgtattagcaaatgctcatgatagtaaggcaaagcagataaatggaactcataaatctcatgtgcactctgaacgcgaggctcaaattcttgctcaatttaagccagaaatagacacaaagaagttgatcgccgatcttaagaaatccgataagttggccgctgatgctttactgtacttcaaaaagacacgccatattattctgtattatgaggatgttgtcagcaatgatactgtgagtcctattgctttatatatccttgtccggaggctgaatgagcatctctctctctctctctctctctctaaacagctttttttttctttcttcagaagctcatggatgtcctggattttctga</cdnaseq>

Protein Sequence

<aaseq>MEEAGREKDRSVVVVVEDLGTATKDTVNPSAKSTRRYPLLSWTT ILALIALVGVYIFSVSLKQNGMLLGLKQTDMIEKEREKLCQDPSIPVTEIPYVHYPTP DTYSRKECACTPVRFFAILSMQRSGSGWIETLLNSHENISSNGEIFSIKERRSNITSI TKTLDKLYNLDWLSSAAKNECTAAVGLKWMLNQGLVQHHEEVVEYFNRRGVSAIFLLR RNTLQRYVSVLANAHDSKAKQINGTHKSHVHSEREAQILAQFKPEIDTKKLIADLKKS DKLAADALLYFKKTRHIILYYEDVVSNDTVSPIALYILVRRLNEHLSLSLSLSKQLFF SFFRSSWMSWIF</aaseq>

Gene Sequence

<dnaseqindica>364..435#687..934#1029..1287#2626..2805#2888..3169#aggtatggcggacgccatggcatgctatattggaaggtccgcccatggtggcaactgctataaatagctaccctaccccgcctccttccttctcaacctcctcctattctctctctctctctctctcttcccccagatgcgaaattcctgccccagctcaacccaaagctccgtgccgttacctcctctctattctccaaccgtttcctccctcttcccggaaggggggcgttctggcgcagctgattgatttgattgaacctcgaggccgattgattgggtccgagtaatctcggaaatgtggggttgttgcggttgattttttgtatttggtgttgctttgatgtttgcttgcgttctccgatggaggaggcaggaagagagaaggataggtcggtggtggtggtggtagaggatttgggcacagccactaaggtgatgcaaggctaattaattgactcatctatctaataattctccttccttttctgtgcgttttacatcaagggttaattggaatgtgatattgtgagagtgtcactattcaaccatctttaattcatatatatttatttattctgccacgatttcttttatttgcaatgagtcaaattcattagactgagatgcccttcggtccttccgtcttgcaattaacaatcattgactggactgttcaattacaggatacagtcaacccaagcgcgaagtctacaaggaggtaccctctcctgtcatggacaactatattggccttgatcgcgcttgtcggagtatacattttctcagtgtctttgaagcaaaatgggatgcttcttggtcttaagcagacagacatgatagaaaaagaaagggaaaaactttgccaggaccccagcattccggtgactgagatcccttatgtgcattatcccacacctgatacttacagtaggtaatgaggataaacttgcgagttggaattctatgtttatgttttccatgtcagcaagtaactgggtatttcctttcttaaatttcttcgctaggaaagaatgtgcatgcacaccagttagattcttcgctatcttgtcgatgcagaggtcaggaagtgggtggattgaaacattattgaatagccatgagaacattagctccaatggagagattttctctatcaaggaaaggcgtagtaatatcacttcgatcacaaaaacattggataaattgtacaatctggactggctcagcagtgctgctaaaaatgaatgtactgcagcagtggggttgaaatggatgctgaatcaggtaatattttcgccataatagttatttttactactcctatctcatggtaagttgcacagtttcatttttgttacttaattatatattttcttgtggaacatggacatggcagctttagctggcttttggaatcttcttgataatataggtctaaaagtaattatttattaaattctgacttagcagttagtagtacacatgcatagtagtgcggagaatggttagtattaatgtttataactttagctagattttgcggagaatggttagtcaatttgtatagcacttcagcagtatggtattctttttgaaaagtaaggaatgtagcaatatactaatatttcatgcactggccctgtgctcgtgaattttctgttcaaagcatattcggatgtggaagttttgcttccataaaggtttttatggaattagctgctaaaagcctaaaacccttggcctaggagattgaattactaggtttctgtagatgggtaagcaaagaagtaggtgaccttatattttctccatatttattcgaagtattaacttttacattggtggttcaccttcgtccagaaatgatgctgttgataaatacatagcactgcatatttcaaaagtatagaccatgaattagattcattttggagatgcggttgctgtctaagagaagatagattgacgagtgggctctgccttgatgagtttgttgagaacctgcccgtgtgtctaaaccattgtcacagtagctccacgtagtttgaagcccaggtggaattgctttagcggtgtagtttgtctggttttatagttgaggtgcgtaatttatctgtttccatagttgaaggctgaaagctagaacagcatgaatgttgagggggataaaatagactcatccctaatatggccccctttgattcaaaggaaattcataggaattttagaggattttattcctataggaatttttcctatatagccctttgaatcaaaggaatggatcctatgaaatcctataaaattcctatggaatgcctcttcccatgcaaattttggaggaaatttaacatgaggtagaacctcttggtaactttcctttgagtctctctctcatccaattcctgtgtttttcctgcggttcaatcaaacggtcattcctgtgtttttcctgtgttttgcaatcctatgttttacacttacattcctatcaaaatcctatattttttctattcctacgttttctcaatcctgcgattcaaaggggcctagtttactgcacctactctgacacctattttaatttattttctgttattgttatcttggtgtaaattgcagggtctagtgcaacatcatgaagaggtagttgaatacttcaaccgaagaggcgtgtctgcaatcttccttttaagaagaaatactctccagcgttatgtctctgtattagcaaatgctcatgatagtaaggcaaagcagataaatggaactcataaatctcatgtgcactctgaacgcgaggttcacttctttattttctattgaaagatctgcatgtgaaataaaaggttatcctactgatctttcttcttcttttttgcaggctcaaattcttgctcaatttaagccagaaatagacacaaagaagttgatcgccgatcttaagaaatccgataagttggccgctgatgctttactgtacttcaaaaagacacgccatattattctgtattatgaggatgttgtcagcaatgatactgtgagtcctattgctttatatatccttgtccggaggctgaatgagcatctctctctctctctctctctctctaaacagctttttttttctttcttcagaagctcatggatgtcctggattttctgagattgcctaagagaaagctgtccagtaggcatgtgaaaatccataccaaacttttgcgtgatcatatagataactgggctgaagttaatagtactttgatgggaacacagtacgagagtttcctgaatggctgaaggtgactgaactagcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0784600, RefSeq:Os01g0784600