Os01g0784700

From RiceWiki
Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0784700| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001050998.1 GI:115440366 GeneID:432703...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0784700

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001050998.1 GI:115440366 GeneID:4327038

Length

7839 bp

Definition

Oryza sativa Japonica Group Os01g0784700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35004721..35012559

Sequence Coding Region

35004807..35005118,35005220..35005370,35005462..35005666,35005784..35005994,35006228..35006403
,35006531..35006662,35010994..35011555,35011672..35012430

Expression

GEO Profiles:Os01g0784700

Genome Context

<gbrowseImage1> name=NC_008394:35004721..35012559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35004721..35012559 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctcctccccgctctgctgctacctgctgctcttcgtcgtcgtcgtggtgctcacgggcagctgccgtgccagggacacagtcgtgcccggccgcccgctcgccgcgaacgagacgctggtctcgggcggcgacgccaacttcgtgctcggcttcttcaccccgccgggcgccaacagcacctacgtcggcgtctggtacaacaaggtctcggtccgcaccgtcgtctgggtcgccaaccgcgaggacccgctccccggcgacgtcgcggacaaccccgacgccacgctctccgtgtcgcccacgggcacgctcgccattgtagcggggaactcgaccgttgtgtggtcggtcacgccggcggccaagctggcgagccccacggcccggatcatggacagcggaaacctggtgatcgcggacggcgctggcggtggcgtggcgtggcaggggttcgactacccgaccgacacgctgctcccggagatgaggctgggcgtcgactacgtgaaggggaggaacaggacgctgacggcgtggaagagcccctccgacccctcgccgggccccgtcgtgatggccatggacacgtccggcgacccccaggtgttcatctggaacggcgccgagaaggtctggcgctccggcccctgggacggcgtccagttcaccggcgtcccggacaccgtcacctactccggcttcaccttcagcttcatcaacaacgccaaggaagtcacgtacagcttccaggtgcacaacgtgtcgatcatatcgaggctggggctgaacagcacggggagctacgggctgctgcagcggtcgacgtgggtggaggcggcggggacgtggaacctgtactggtacgcgcccaaggaccagtgcgacgaggtgtccccgtgcggggccaacggcgtgtgcgacacaaacaacctgcccgtctgctcctgcctccgcggcttcacgcccaagtcgcccgaggcgtgggcgctgcgtgacggccgcgcggggtgcgtgcggtcgacgccgctcgactgccagaacggcaccgacgggttcgtcgccgtggagcacgccaaggtgcccgacacggagcggagcgtcgtggacctgggcctcagcctggagcagtgccggaaggcgtgcctcatgaactgctcctgcacggcgtacgcgagcgccaacgtgagcggtggcggccgcggccacggcgccggcaccggctgcgtcatgtggacgaccgggctcaccgacctgcgcgtgtacccggagttcggccaggacctcttcgtccgcctcgccgccgcagatctcggtttaacaagcaaatctaacaaggcacgtgtaataatcgccatcgttgtcagcatctcatcggtgacgtttctgtcagttctcgctggttttctcgtctggacaagaaagaagaagagagcaagaaaaaccggatcaagcaaatggagcggtggttcccgcagtactggtcgccgctatgaaggaagcagtcatcacgatgatgatctggaacttccaatctttgatctggggacaattgcagctgctactgatggtttctcaatcaacaacaagctcggtgagggtggcttcggaccagtatacaagggtaagctcgaggatggacaagaaatagcagttaaaacgttgtccaaaacatccgtacagggtctcgacgaattcaagaatgaggtaatgttgatagctaaacttcagcataggaatcttgttcggcttctcggcttcagcattagtggacaagaaaggatacttgtgtacgaatacatggcaaacaagagcctagactactttctgttcgcgcgataccgtataatagaaggcattactagaggtttactatatcttcaccaggattcaagatacagaatcatccacagagacctgaaggcaagtaatgttcttcttgacaaggagatgactcccaaaatttctgactttggcatggcaagaatgtttggaagtgaagagacagaaatcaataccagaaaagtggtcggcacatatggctatatgtctccagaatatgcaatggacggagtcttttctgtcaaatcagatgtatttagttttggagttttactactggaaataattagtggcaggaggaacagaggggtttattcatattcaaaccacctaaatcttctgggacatgcatggagcttatggaatgaaggaaaaagcttggagttagcagatgaaacaatgaatggctcgttcgactcagatgaagtactcaaatgcatcagagtgggactcctatgtgtgcaagagaacccagatgaccgtccattgatgtctcaggtgcttctgatgttagctacgacagatgctaccacattgccaactcctaaacagcctggctttgcagctagaagaattctaatggaaacagacacatcatcaagcaagccagactgcagcatattcgacagtgcaacagttactatacttgaaggtcgatag</cdnaseq>

Protein Sequence

<aaseq>MASSSPLCCYLLLFVVVVVLTGSCRARDTVVPGRPLAANETLVS GGDANFVLGFFTPPGANSTYVGVWYNKVSVRTVVWVANREDPLPGDVADNPDATLSVS PTGTLAIVAGNSTVVWSVTPAAKLASPTARIMDSGNLVIADGAGGGVAWQGFDYPTDT LLPEMRLGVDYVKGRNRTLTAWKSPSDPSPGPVVMAMDTSGDPQVFIWNGAEKVWRSG PWDGVQFTGVPDTVTYSGFTFSFINNAKEVTYSFQVHNVSIISRLGLNSTGSYGLLQR STWVEAAGTWNLYWYAPKDQCDEVSPCGANGVCDTNNLPVCSCLRGFTPKSPEAWALR DGRAGCVRSTPLDCQNGTDGFVAVEHAKVPDTERSVVDLGLSLEQCRKACLMNCSCTA YASANVSGGGRGHGAGTGCVMWTTGLTDLRVYPEFGQDLFVRLAAADLGLTSKSNKAR VIIAIVVSISSVTFLSVLAGFLVWTRKKKRARKTGSSKWSGGSRSTGRRYEGSSHHDD DLELPIFDLGTIAAATDGFSINNKLGEGGFGPVYKGKLEDGQEIAVKTLSKTSVQGLD EFKNEVMLIAKLQHRNLVRLLGFSISGQERILVYEYMANKSLDYFLFARYRIIEGITR GLLYLHQDSRYRIIHRDLKASNVLLDKEMTPKISDFGMARMFGSEETEINTRKVVGTY GYMSPEYAMDGVFSVKSDVFSFGVLLLEIISGRRNRGVYSYSNHLNLLGHAWSLWNEG KSLELADETMNGSFDSDEVLKCIRVGLLCVQENPDDRPLMSQVLLMLATTDATTLPTP KQPGFAARRILMETDTSSSKPDCSIFDSATVTILEGR</aaseq>

Gene Sequence

<dnaseqindica>7442..7753#7190..7340#6894..7098#6566..6776#6157..6332#5898..6029#1005..1566#130..888#cggcccaccccgtcttgcaactagctccggtccaaaaccgcacttgtgcacgacggctactcactctcgcagtggcgtgttagcatagcaccgctcgctcgttgctcgcgcgcgccgggaatcctagcaatggcctcctcctccccgctctgctgctacctgctgctcttcgtcgtcgtcgtggtgctcacgggcagctgccgtgccagggacacagtcgtgcccggccgcccgctcgccgcgaacgagacgctggtctcgggcggcgacgccaacttcgtgctcggcttcttcaccccgccgggcgccaacagcacctacgtcggcgtctggtacaacaaggtctcggtccgcaccgtcgtctgggtcgccaaccgcgaggacccgctccccggcgacgtcgcggacaaccccgacgccacgctctccgtgtcgcccacgggcacgctcgccattgtagcggggaactcgaccgttgtgtggtcggtcacgccggcggccaagctggcgagccccacggcccggatcatggacagcggaaacctggtgatcgcggacggcgctggcggtggcgtggcgtggcaggggttcgactacccgaccgacacgctgctcccggagatgaggctgggcgtcgactacgtgaaggggaggaacaggacgctgacggcgtggaagagcccctccgacccctcgccgggccccgtcgtgatggccatggacacgtccggcgacccccaggtgttcatctggaacggcgccgagaaggtctggcgctccggcccctgggacggcgtccagttcaccggcgtcccggacaccgtcacctactccggcttcaccttcagcttcatcaacaacgccaaggaagtcacgtacagcttccaggtataaactgacgagtacccgtgcaatttatgtgtacaactttttaaattttattggagttgtaccgtaccgctggtgccatgtcatatatgacacgcgtgcgcgtgttcgtgtaggtgcacaacgtgtcgatcatatcgaggctggggctgaacagcacggggagctacgggctgctgcagcggtcgacgtgggtggaggcggcggggacgtggaacctgtactggtacgcgcccaaggaccagtgcgacgaggtgtccccgtgcggggccaacggcgtgtgcgacacaaacaacctgcccgtctgctcctgcctccgcggcttcacgcccaagtcgcccgaggcgtgggcgctgcgtgacggccgcgcggggtgcgtgcggtcgacgccgctcgactgccagaacggcaccgacgggttcgtcgccgtggagcacgccaaggtgcccgacacggagcggagcgtcgtggacctgggcctcagcctggagcagtgccggaaggcgtgcctcatgaactgctcctgcacggcgtacgcgagcgccaacgtgagcggtggcggccgcggccacggcgccggcaccggctgcgtcatgtggacgaccgggctcaccgacctgcgcgtgtacccggagttcggccaggacctcttcgtccgcctcgccgccgcagatctcggtacgccatcacattccacgcgaactatgtactatgcattgctacatacgtacgtatatatctacgtattacgtgcatgttttacgtattccatgcatgctgcgctgcatatagaatcttttccatgtgtttggtgttcgttccgtccaaatcagacagcacaaaagtaccgtcgaaggccagatatttgggcctcctagtccattcctttttggctatctccctctaatcctccatagctccaatccctccttttttggggagaatctcaatagaagattagaaagagatgatgagtgccacgcagcgtgccctgcttcaaccgagagaacttgctgccctgatccatttcactggaagacgatcacgacattgattttgattccggccatctttattccttgccctttaatctccttttctctccatcatgaaaccgatcgatgttagcaagggagaaaggaagcgaaaggagctttgattaattagccagacagcgatcgataccatttggtcccgggctctttcgaaggcggggcgcttatcgtcgcaaaagaagcacgctttgattttaggagctatcgcgcgcaacaaaagctcaattatacacggtagaggaatgagacggcttccacgtcgatctctccaacgtgcatcatatcactgcacctgctagctcccgtgcagcattctcgagtcgatccattgctgcccggccatttgtgaggcccctactgatcgcctcgacgtgtatcatcgaccaaaggagccttttacatggtgtggggcttgcccgatttggcagctagtacaaagattagagggccctgtacaccacaagagcgaagtgtggccgtcgtcttgattggtaggtgaaatttcgccgggaagaagataaagtagcagatcttggatagctctagtcaacagcgacaagacaaatagacaatgatcctcattatttgaggagataggcagaggcagggattgcagtagatctgtagatgtacgtacaaatctttagcttataaattggaaacgaatttgatggtctgaagtttgaactcacggtgcaacttggaacttaatttggatcttacgcttgttgtgttcaataatagtattttaagacgatggtaagttcacatgacaaaaaaaaaactaagaagtactctcttcgtcgtataatataataacctagtatcagatgcgatatattctaatgtcccatttagttttgaacacatcctatattcagttctatattattatagtgtaggaaagagggagtagaagtactccctccgtcccattatatctgcagttgagaattcctgcgtctgacgtttgaccgtccatcttatttaaaaaattttatgattaatatttttatttttattagatgataaaaataaataatactttatgcatgacttattttttaaaattttttcatattttttttcaaataagacagatggtcaaatgttgtatatgaaaaatccatgattgcatttaaaagagacggagggattagtatactagtggaaaggagggagtagaagttcctagtacaacaaatttaaactgtttgtctagatttgttatactaggatgtctcatatcccacaccaaaatcccttatatacagggacagagggagtagaaagttgtagccttgttgggaattggatttggaaccgggtagatcgatgtgaagaatctgcccttgccgagagctagaaaacatcccatctgccacaaagctctacgtggtaatcaaacaacctaatgtctccttcggttttagattgttgtagtccctccgtcccataatataagagattttagatagatgtgatatatcctagtataatgaatctgggcagattcattgtattaggatatgtcacacctacctaaaatcctttatattatgggaccaacctagtagtggatgtgacacattttaatactatgaatttggatatacacatattcatattcgtggtaataggatgtcatatactccctccatcccaaaataagtgcaaccatgagtttccgtgttcaactttgatcgtccgtcttatttgaaatttttttatgatttgatttttattgttgttatattataaaaattagcatggtgtcccttgcagattgtgcggctaggatcattatattttctctcatatattcttatttttttttaattcagaatttccattaattctaaattgtatatcgatatggactctagtctcatattccaatattcattattttttaattctgaatttcagctatttctaaattgtatttctatatggattctatttttctttttcttcaattaatatgagaatttctagaccacgagaacgaacgtggaggctttctttttctattactttaataagttaatagattataaaacatgaatagactctacgcttgacttatgttttttagttttttggaaaaaatttcaaataagacggacgattaaagttgggcatggaaactcatggctacgcttattttgggacggatggagtactatcatagatttgtttttttatgagacggtgggagtaggaaagatggagcagaagtaatagcactggctttgtttagttcccattttttttttctaaaaacgtctcatcgaatctttgatacatgcatggagcattaaatattggataaagaaaaaaacaaattgcacagtttgcatagaaatcggaagacaaaccttttgagcctaattagtccatgattagccataagtgctatagtaacccacatgtgctaatgacggattaattaggcttaataaattcgtctcgcggtttccaggcgatttttgaaattaattttttcatttgtgtctgaaaacccattccgacatccgatgaaatgtctgatgtgacacccaaatttattttttcgcgatctaaacaaggccttagattgtactccctccgtcacataaaaaacgaatctagaaccaaatgtgacatattgtagcactacgaatctagacacagtactatgatgttttaaattctatactaagttggttttttatgggacggagggagtagcttcgttgggaattggatttggaaccggacagatcgatgccaagaatcttccctcgccgagtcaagccagaaaacatcccagctgccacaagcttcacgtcgcaatcaaacaaccatcggtcacttcgctttatcgcccagccgggagagatattttccgtgcaaaaaccacgctccaaagcgaccggccgccaccgcgccacccgcgacatggcagcggccagcgggggtggccggccaatcggccatacgcctcgctttccagcacacactgcacgcgcggccgcgggcggcgtaccggccgaaccatcgagacagtgcatggacaaatatgtgaacgtgtgatgcgtcgccggacgccgggctctgcggcgttgctgggctaaccgaaaacacaaagcgtgaaggcctctgtgcctctagagaattcaaaaccacaaatgttcaaacgctagacaccgataaatccttacgaagaggttgggtacttgggtaaacatgttgaactggttcatggttgatcacatattcacgtgcatttgccactgtagatcgcctgtgatgctgtagcgcaaggtttccaggtgtacctgaaacagagcatctgactctggtttggcattgtttcgagggcatcatatgtggcactacatgttgttcagcgcgctactctgctctacgaataggcccctattcttctcggctttttcatcagattatttgcttcacaaaaaatatattttattaaaaaaacctttccaatagcattacttaggtggtgtttgaatctccttaagaaaaagattaagtgtttcacgtaaaacgagatgataataacatatgattaattaagttttaattattacaaacttaaaaaatagattaatctgatatattataacagctttcatatagaaaatttttacacgaaacgcacattttagcagtttgaaaagcgtatcactagtatccaaaagtttattcaacttttgttggagaaaagaacatggccacttcttttaagatatttattttttttaaaaaaatattcctacagtaaatagatattctgtagcaataatcgttccatattccaaaccaaacaggtaatactgattaaatgctcatatatggggcaactcattatattcctctagataaattagtcgatatgtcgttgcataccatcatcgatttaacagctacgtttttcttgcacaggtttaacaagcaaatctaacaaggcacgtgtaataatcgccatcgttgtcagcatctcatcggtgacgtttctgtcagttctcgctggttttctcgtctggacaagaaagaagaagagagcaagaaaaaccggtaatggccatgtgtcttccgagtgttaacaagcagatactccatataaatacttgaacaaaaagaggggaaaataataagcatatttcagggtatcatactcataccgacttctatgtgattataggatcaagcaaatggagcggtggttcccgcagtactggtcgccgctatgaaggaagcagtcatcacgatgatgatctggaacttccaatctttgatctggggacaattgcagctgctactgatggtttctcaatcaacaacaagctcggtgagggtggcttcggaccagtatacaaggtacaacactacatgaaccaccccaatgaatcacgcataaacatgcaaacattttgaacgcaagttcaatggcaactcatgattttcgttcaaaaaaatggcaactcatgatttcaagcatcaaaaggcaattatttaaggtcttcagcatataaatgaacgaacaatgatagcataaaaaaaatgatcttctgaaatttgaactacagccgctatgtctggttgatcaacagggtaagctcgaggatggacaagaaatagcagttaaaacgttgtccaaaacatccgtacagggtctcgacgaattcaagaatgaggtaatgttgatagctaaacttcagcataggaatcttgttcggcttctcggcttcagcattagtggacaagaaaggatacttgtgtacgaatacatggcaaacaagagcctagactactttctgttcggtatgactatctcagtctttttatgaccatgaaaaaaatggctgataatactgtgaagaacataacagtttgcaaatgtaacagaaaaatccaacagtgtcctgcttgactggcaagcgcgataccgtataatagaaggcattactagaggtttactatatcttcaccaggattcaagatacagaatcatccacagagacctgaaggcaagtaatgttcttcttgacaaggagatgactcccaaaatttctgactttggcatggcaagaatgtttggaagtgaagagacagaaatcaataccagaaaagtggtcggcacatagtaagtatgctaagtatttacaacaggaaatactgatcgtataaatgaatttactcatatatttgctttattcattttggctcttttgtagtggctatatgtctccagaatatgcaatggacggagtcttttctgtcaaatcagatgtatttagttttggagttttactactggaaataattagtggcaggaggaacagaggggtttattcatattcaaaccacctaaatcttctgggacatgtgagagcttaaatcatctactacatgtttgaatggaagttgttttctcaattcaatttcagagtaacttcaaaaactttttttctttttttgccccttaggcatggagcttatggaatgaaggaaaaagcttggagttagcagatgaaacaatgaatggctcgttcgactcagatgaagtactcaaatgcatcagagtgggactcctatgtgtgcaagagaacccagatgaccgtccattgatgtctcaggtgcttctgatgttagctacgacagatgctaccacattgccaactcctaaacagcctggctttgcagctagaagaattctaatggaaacagacacatcatcaagcaagccagactgcagcatattcgacagtgcaacagttactatacttgaaggtcgataggatgttaatgtgctaattgaacttactaggggaatgtgcattacataatgtgctttcttcatcaccgtgtgtttgagcaacagaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0784700, RefSeq:Os01g0784700