Os01g0786800

From RiceWiki
Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0786800| Description = Conserved hypothetical protein| Version = NM_001051009.1 GI:115440388 GeneID:4327050| Length = 2863 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0786800

Description

Conserved hypothetical protein

Version

NM_001051009.1 GI:115440388 GeneID:4327050

Length

2863 bp

Definition

Oryza sativa Japonica Group Os01g0786800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35120237..35123099

Sequence Coding Region

35120277..35120585,35120723..35120872,35120959..35121099,35122395..35123099

Expression

GEO Profiles:Os01g0786800

Genome Context

<gbrowseImage1> name=NC_008394:35120237..35123099 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35120237..35123099 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acctcgtcgcaccccagctccagttctagcctcctcaccaaaccgccgcaatggcgggaacacctcctccttgccgactcgtcctcacacgtcggcctcggcctgaacaccgtcgccgcatggctactctccttcctggccgcgtccgtgtcgagcgccggcggcgtggggggcggatcgctgttcctccccatcctgaacctcgtggcggggctcagcctcaagcgggccaccgcctactcgtccttcatggtcaccggcggggccgcctccaacgtgctctacaacctcctctgcacgggctgcgggcggcgcgccgcggcggtgatcgactacgacatcgccctgctcttccagccgtgcctgctcctgggcgtcagcatcggggtggtgtgcaacgtcatgttcccggagtggctcatcaccgcgctcttcgcgctgttcctcgccttctgcaccaccaagacgttgcgtgccgggctcaggatatggagctcggagagccgcggcgccaccctcgcagtcgcagccgccaccgcgcacggccgcgaggagcccctgctgctgccgcacggcaccgatgccggcaatggcggtggtgcccgcggcgacgcggggttcccgtggaaggacgtgtcagtgcttgtcatggtctggctctgcttcttcgtgctccatgtcttcattggcgataagcatggaaagggtatgatcaggataaaaccctgtggagttgcatactggttgatcaccctgtcccaggttcctttcgccgtggctttcacagcttatattatatacgcgaagaggaagaaacaagttctgcataatcaagaagatggcaaggcaaatccggagagcactaaaatggataccttgcccacgcttctattcccactggctgcttttgtcaccggtgctctgagcggcctctttggcattgggggaggcctacttctgaaccctgttcttcttcagattggaataccaccgcagactgcagcagcgacgtcttcgtttatggtccttttctgcgcatccatgtcgatggttcagttcatcctgctaggcatgcaaggcatcggagaagcttctgtttacgcagggatctgctttgttgcttcggttgttggagcggtggtgattgagcgagctatcaggaagtccgggagggtgtcgctgatcgtgttcttggtaactggcatcatggcggtcagcaccgtgatcatcaccttcttcggagcattggatgtatgggcgcagtatactagtggagcttacatgggtttcaagttaccttgctga</cdnaseq>

Protein Sequence

<aaseq>TSSHPSSSSSLLTKPPQWREHLLLADSSSHVGLGLNTVAAWLLS FLAASVSSAGGVGGGSLFLPILNLVAGLSLKRATAYSSFMVTGGAASNVLYNLLCTGC GRRAAAVIDYDIALLFQPCLLLGVSIGVVCNVMFPEWLITALFALFLAFCTTKTLRAG LRIWSSESRGATLAVAAATAHGREEPLLLPHGTDAGNGGGARGDAGFPWKDVSVLVMV WLCFFVLHVFIGDKHGKGMIRIKPCGVAYWLITLSQVPFAVAFTAYIIYAKRKKQVLH NQEDGKANPESTKMDTLPTLLFPLAAFVTGALSGLFGIGGGLLLNPVLLQIGIPPQTA AATSSFMVLFCASMSMVQFILLGMQGIGEASVYAGICFVASVVGAVVIERAIRKSGRV SLIVFLVTGIMAVSTVIITFFGALDVWAQYTSGAYMGFKLPC</aaseq>

Gene Sequence

<dnaseqindica>2515..2823#2228..2377#2001..2141#1..705#acctcgtcgcaccccagctccagttctagcctcctcaccaaaccgccgcaatggcgggaacacctcctccttgccgactcgtcctcacacgtcggcctcggcctgaacaccgtcgccgcatggctactctccttcctggccgcgtccgtgtcgagcgccggcggcgtggggggcggatcgctgttcctccccatcctgaacctcgtggcggggctcagcctcaagcgggccaccgcctactcgtccttcatggtcaccggcggggccgcctccaacgtgctctacaacctcctctgcacgggctgcgggcggcgcgccgcggcggtgatcgactacgacatcgccctgctcttccagccgtgcctgctcctgggcgtcagcatcggggtggtgtgcaacgtcatgttcccggagtggctcatcaccgcgctcttcgcgctgttcctcgccttctgcaccaccaagacgttgcgtgccgggctcaggatatggagctcggagagccgcggcgccaccctcgcagtcgcagccgccaccgcgcacggccgcgaggagcccctgctgctgccgcacggcaccgatgccggcaatggcggtggtgcccgcggcgacgcggggttcccgtggaaggacgtgtcagtgcttgtcatggtctggctctgcttcttcgtgctccatgtcttcattggcgataagcatggaaaggtatgccccccttgcttgctagcctcgtgacgtgttctgtcgtgccgtaagcttctcgagcctccgttacacagttaaagcaacaagaccagcgcaccatgcaacttcactgtacaagtgtacatggtggttgctgatgcacgaaagtgacgcataggccagtgcaaacccgcaacgttgggtaggaaggaaacggatccatggaggcatggaccatgggtaggaagtatatctgttcgtgatccaaagcaacgatactccagaatgcgcccttcgttatcacgggtgcctttctgcttgtcagtttttgcttgcactatgcagttatgctctccatttgttgttagctttagtggaaagtagcggctaggtttgtttgcttcctttgctttagtgaaaaatgtcaattttactcgataggaatgcctcacttcatctcaacacgcgcctttttcatgaactctagataggtatcgagtcggcctggaaatgataaagcagctcacataaagtcgacatgttctgaaaagaaaatttaggggatgtttagatctaggagtgtaaaattttagcgtgtcacataaggtattatatagtgtgtcgcatggggtgttcgagcactaataaaaaaactaattacagaatccatcagtaaaccgcgagacgaatttattaagactaattaatccgtcattagcaaatatttaatgtagcaccatatagtcaaatcatggagcaattagacttaaaagattcgtctcgtaaattagtcacagtctatgtaattagttattttgttaagcctatatttaatacttcatacaggtgttcaaacgttcgatgtgacatggtgaaaaattttaggataggatctaaatagggccttagcagttttctagctgatattagtttgttccagaagttgattgacctggaataacctgttgaactcgtgtgtcttttcggtagcatgatgaattgttttctaaaaatatatataagctgatggaaggacaacaccaaatcatatagctggagcctggaggctggccaattctccctgaaaacaaaaataaatcgaacgtcgtgtcagttaattactgaattgggaccttttcttccttgttagaatcataacattgttcttctccacattcattatatatgaactggaaagattgaagacgtcagtggcaattttggcaacttaaccataccgaggttgcagtttagaaattctggccatcaatcatactcatatgcatgattccaacattttgttcttatctgctcagggtatgatcaggataaaaccctgtggagttgcatactggttgatcaccctgtcccaggttcctttcgccgtggctttcacagcttatattatatacgcgaagaggaagaaacaagttctgcataatcaagaagatggcaaggtggcatattttgtcttttattaactgttcttgtgacaattacttacaagcaattggggctcatgaaccattacatggtcatgtaggcaaatccggagagcactaaaatggataccttgcccacgcttctattcccactggctgcttttgtcaccggtgctctgagcggcctctttggcattgggggaggcctacttctgaaccctgttcttcttcagattggaataccaccgcaggtacagtggtacacacactacagattcttaagctactgaaactatggtcctatggacctatggttaccaaggtatgatcagtagttttctgtcgagtccatgattcatgcagtagcattaccatccttgatttgcagactgcagcagcgacgtcttcgtttatggtccttttctgcgcatccatgtcgatggttcagttcatcctgctaggcatgcaaggcatcggagaagcttctgtttacgcagggatctgctttgttgcttcggttgttggagcggtggtgattgagcgagctatcaggaagtccgggagggtgtcgctgatcgtgttcttggtaactggcatcatggcggtcagcaccgtgatcatcaccttcttcggagcattggatgtatgggcgcagtatactagtggagcttacatgggtttcaagttaccttgctgacattgtcagtaagctaaatatgtgcacacagttacacaac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0786800, RefSeq:Os01g0786800