Os01g0786900

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0786900| Description = WD40-like domain containing protein| Version = NM_001051010.1 GI:115440390 GeneID:4327051| Length = 5637 bp| Defini...")
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Gene Name

Os01g0786900

Description

WD40-like domain containing protein

Version

NM_001051010.1 GI:115440390 GeneID:4327051

Length

5637 bp

Definition

Oryza sativa Japonica Group Os01g0786900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35124831..35130467

Sequence Coding Region

35125398..35125713,35125897..35126063,35126171..35126998,35127071..35127307,35128043..35128459
,35128539..35129000,35129785..35129970

Expression

GEO Profiles:Os01g0786900

Genome Context

<gbrowseImage1> name=NC_008394:35124831..35130467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35124831..35130467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggagcggcgcgcaggctcctcgaggcggcggaggcggcggggccttctcgaagcggacgctgtccggctacatgaggatcatgtcgtcgggggcgtccacggccgcgtccagcctgctgtcggtgggcgcgtcgctggtgaactcgatcgccagccacgacgaggatgggagccgtgaccaggtacaatgggctggatttgataaacttgaatgtgggggtgacatgctgcgacaggttttacttctagcttacagatctggtttccaagtatgggatgttgaacatgctaatgatgtaagacagctagaatccagacatgatggtacagtttctttcatgcaactcctaaagaaaccaattgcctctacaaacagtgaagacaaatttgcagatgaacggccactgttagctcttgcttgtgacggaactagcacaggaagtctaatcagcaatgatggcaatggccctgttcccaatggagccaatggtactctccataatattggccatgagaatcatcctactgtacttcggttttattcattaagggtccatgattacgtgcatacaataaagttcagatcaactgtttattccatacggtgcagttctagagttgtagctgtatctcaggctaatcagatacattgttttgatgctgcaacactggagagagaatacacaatccttaccagtcatatagttccaccaatttcaagttatggaccacttgcactgggtcctagatggattgcatattctgggaatccagtcccagttccggatacaggccgtgttacccctcagcttcttaatctatctcccctagttccacaacctggttcaaatggcagtgttgtggcatactatgcaaaagaatcaagcaagcaactggcttctggcattataacacttggtgatgttggatataagaagttgtccaagtattgttcagacttaattccaagtagtaacaatgttataaaccaaaggaattctggcttcaaagcaaatggggcaacaataaacgggcatacagacagcgaatatgctggaatggttattgttcgagatattgtctctaaatcaatggtggttcagttcagggcacatactagccccatttcagcactctgttttgatcccagtggaactttgttggtgacagcttcaattcacggtcgaaatatcaatgttttccgcattctgccttcttcgcatgggagttcatcagaagctggtccaaatggaacctgtgttcatctgtacaaattgcaaagaggcatcaccaatgcggtcataaaagatatcagttttagtgacgacagtgaatggataatgattagctcttcaaggggaactagtcatttctttgcaatatctccatattgtggatcaacaagctttcactacaacgaaaacaatcttgcagaaaatagttatgcggtggattcatcagttaatcatactgcccattggtcccaaaactcagctccctctctgagtctcaatcagaagatactctctgttacgggcccccctgtaacattgtctgttgttagtagaataagaaatggaggcaacctgttgaagggcgctgttcatggtgctgcagcatttgcaacaggtgtttccagtccaatttctggtgctattgcttcaacatttcacaattgcaagggtgccgtcaaaaactcagatggaagttcgccttgcatgaagtatcatttactagtattttctccatctggaagcatcattcagtatgttctccatcgctctgcagagcaggatcctggaattgattttccctcgagtgccattccttatggatcacaaagagaaactgacactaggtttattattgaggctcttcaaaagtgggatgtttgtcataaaagaaatcgaagagacgctgctgagagttttgtatatagtgattttgacatcggagaaaacagtaaactttttcagaaagtggcaaagaaaggaactagtgtttatccatccaatggcactgctgttgaaaagcagaagctaggtgatgagaatcataatttttatatttctgagagtgaattgcagactcatgttgttccaacaccactctggtcaagatctgggatgcattttcaagtaatgggggatggagctctagaagcagacaatactggtataatttcaggtgaacttgaaatagaaaagctccagactcgcaatattgaatctaggtcaaagaatcttataccagtatttgaatctcttcatacatccaggtttcaacagtcaagggtgagcacacctgatagtaacaaatatggattgcttcagcgtcaaaagtccggattttcagaggacggtagactctcctgcagaagcagttctagctctttggactgcatgtctgaaggcccaattagcactgatgataatggttttggtcaatgtttagtagaagatagtggtggtgctgtaaataagaacccaaatgttaacccccgttccgagcttgtaaataatactcagagccttaacacagaggcccagctcggatttgtaaataacaaagaggattgtgaagacagagagcaactcccagatttgtga</cdnaseq>

Protein Sequence

<aaseq>MRSGAQAPRGGGGGGAFSKRTLSGYMRIMSSGASTAASSLLSVG ASLVNSIASHDEDGSRDQVQWAGFDKLECGGDMLRQVLLLAYRSGFQVWDVEHANDVR QLESRHDGTVSFMQLLKKPIASTNSEDKFADERPLLALACDGTSTGSLISNDGNGPVP NGANGTLHNIGHENHPTVLRFYSLRVHDYVHTIKFRSTVYSIRCSSRVVAVSQANQIH CFDAATLEREYTILTSHIVPPISSYGPLALGPRWIAYSGNPVPVPDTGRVTPQLLNLS PLVPQPGSNGSVVAYYAKESSKQLASGIITLGDVGYKKLSKYCSDLIPSSNNVINQRN SGFKANGATINGHTDSEYAGMVIVRDIVSKSMVVQFRAHTSPISALCFDPSGTLLVTA SIHGRNINVFRILPSSHGSSSEAGPNGTCVHLYKLQRGITNAVIKDISFSDDSEWIMI SSSRGTSHFFAISPYCGSTSFHYNENNLAENSYAVDSSVNHTAHWSQNSAPSLSLNQK ILSVTGPPVTLSVVSRIRNGGNLLKGAVHGAAAFATGVSSPISGAIASTFHNCKGAVK NSDGSSPCMKYHLLVFSPSGSIIQYVLHRSAEQDPGIDFPSSAIPYGSQRETDTRFII EALQKWDVCHKRNRRDAAESFVYSDFDIGENSKLFQKVAKKGTSVYPSNGTAVEKQKL GDENHNFYISESELQTHVVPTPLWSRSGMHFQVMGDGALEADNTGIISGELEIEKLQT RNIESRSKNLIPVFESLHTSRFQQSRVSTPDSNKYGLLQRQKSGFSEDGRLSCRSSSS SLDCMSEGPISTDDNGFGQCLVEDSGGAVNKNPNVNPRSELVNNTQSLNTEAQLGFVN NKEDCEDREQLPDL</aaseq>

Gene Sequence

<dnaseqindica>4755..5070#4405..4571#3470..4297#3161..3397#2009..2425#1468..1929#498..683#aatcccaatctcctccccccttccttcctcggccagagaaaaaaaaaagagaaaaaagaggagaggcctcgcaactgcaaaccctcgctttctccgatcgaattgctcgcccgagcaccaccagttcgccgcccttcccaccaccagtcgcctccctcccccgcgcagggtatctcctccggccgccccagtggcgattccccccgagctcccccgcgcggcgccgtggccatgtcgctcacctgaggatacggtcggtgggctgtttcttgcaagagtctctcccccgagccccccaagagaaacagcccgggggacgccgagttgttgattcgatcgccggagttgcgccgaggtgaacctgttttttgtttttggtggtggttccgtctcggttaatctgctttaacttggaggcaaaggctcggtcttcgtctgaggaacgcgggggagcggtggtagcgtcgcgtgcacgggtcctcctcgaggtcggcttgatgcggagcggcgcgcaggctcctcgaggcggcggaggcggcggggccttctcgaagcggacgctgtccggctacatgaggatcatgtcgtcgggggcgtccacggccgcgtccagcctgctgtcggtgggcgcgtcgctggtgaactcgatcgccagccacgacgaggatgggagccgtgaccaggttatttcgcttgattttaaacaattcactgtgctcgttggtttttttgggctgtgttttactagcatagcaactgctagcttggcaataattgtagtacaacggaaaagcctttagatgtctcaccgtctcacgtgtgcattagtggtaactggtgcaaaatgagcaaagattaattatggctggagggcgcaatcagtttctgctcctgccaccaaggtgctcaccatatgtggcagtattagtatttattgttagtgttgatgcatttattttgagcaccatataacaatctgcctatgtttgaaatagatagtgcttttggtagttactagcaattgtccagcggaaagaaaaagtggtgagatgattagtgtgttaacattaacaatgctagctgcagatgttaatccattgagttatcatgaatatgaaaagcttcttttgagcttcggctataattctcctggccaaataattcctatttggacagcacattatgatacgacgctgcatattatatgccattcctagttcatccaaatggacaaatgttgtggcaggagtagggtcagtcaaatcgtccggatgtacataaaccggttggatctaagtaaaagatcccctttttagtagaagtaataattccttgcaaaggatccatgtctacaaaaactagcaaatacatgcagaagggtaacttttccttttgtttgcatcctcgggaaatattttcatataaaaatgtatttacacctgtcttacatgtaaaatgtggttgcaggtacaatgggctggatttgataaacttgaatgtgggggtgacatgctgcgacaggttttacttctagcttacagatctggtttccaagtatgggatgttgaacatgctaatgatgtaagacagctagaatccagacatgatggtacagtttctttcatgcaactcctaaagaaaccaattgcctctacaaacagtgaagacaaatttgcagatgaacggccactgttagctcttgcttgtgacggaactagcacaggaagtctaatcagcaatgatggcaatggccctgttcccaatggagccaatggtactctccataatattggccatgagaatcatcctactgtacttcggttttattcattaagggtccatgattacgtgcatacaataaagttcagatcaactgtttattccatacggtgcagttctagagttgtagctgtatctcaggctaatcaggtatgccatactccacgcttttaacttggtgtttggatcatgaataatcctttatggaaaacaaaaatgcttcttgcagatacattgttttgatgctgcaacactggagagagaatacacaatccttaccagtcatatagttccaccaatttcaagttatggaccacttgcactgggtcctagatggattgcatattctgggaatccagtcccagttccggatacaggccgtgttacccctcagcttcttaatctatctcccctagttccacaacctggttcaaatggcagtgttgtggcatactatgcaaaagaatcaagcaagcaactggcttctggcattataacacttggtgatgttggatataagaagttgtccaagtattgttcagacttaattccaagtagtaacaatgttataaaccaaaggaattctggcttcaaagcaaatggggcaacaataaacgggcatacagacagcgaatatgctggaatggtacagatttcatctcagtatatgttggttaccagctttggatactctattgtgatgtttctatatgctaaccatattaacaaccaaccaattgaaggccattgagaaacccatctgactagttgagtaatcatctgatggtgcagttggtgttgttcctgtctgattgcaccattcagccctaactcgctgtctcgctgtgcataaaaatgaaattgtttgtcattttattttgcaaacaacgaactttgagttagtcttgatgattccaccaaaaagattctgttttgttaaaggcataatgagaattactgttaacaacttatccctcaatgcaacatgaatttaagttttccccttctgcttaaacctagcaaaagcaggtgttgtcgtaggataaatgaaaagttaattcatcctgtggtcgtacttttgtcttggtggaattcagatatagagtaaactgacgatggtggatgtcaaaacttatcctgattaagttggttagtgatagcgcttatttgtgaccaaaggagttgttttatatattaaaaagttgccaggagtattatttcaagatagttttgtgcatatgccactgatatgccatatctcactgacaattggtacttataggatggagtgaactttcagtgaggattttatccgtactcatatttgtcttgccagcttcatggaaccgtgacatttacaatgttccctttccaatgacaggttattgttcgagatattgtctctaaatcaatggtggttcagttcagggcacatactagccccatttcagcactctgttttgatcccagtggaactttgttggtgacagcttcaattcacggtcgaaatatcaatgttttccgcattctgccttcttcgcatgggagttcatcagaagctggtccaaatggaacctgtgttcatctgtacaaattgcaaagaggcatcaccaatgcggtaaggtagcgtacatatttctggactatgtctaatttttagttttggtaacaatatctctttttaccataggtcataaaagatatcagttttagtgacgacagtgaatggataatgattagctcttcaaggggaactagtcatttctttgcaatatctccatattgtggatcaacaagctttcactacaacgaaaacaatcttgcagaaaatagttatgcggtggattcatcagttaatcatactgcccattggtcccaaaactcagctccctctctgagtctcaatcagaagatactctctgttacgggcccccctgtaacattgtctgttgttagtagaataagaaatggaggcaacctgttgaagggcgctgttcatggtgctgcagcatttgcaacaggtgtttccagtccaatttctggtgctattgcttcaacatttcacaattgcaagggtgccgtcaaaaactcagatggaagttcgccttgcatgaagtatcatttactagtattttctccatctggaagcatcattcagtatgttctccatcgctctgcagagcaggatcctggaattgattttccctcgagtgccattccttatggatcacaaagagaaactgacactaggtttattattgaggctcttcaaaagtgggatgtttgtcataaaagaaatcgaagagacgctgctgagagttttgtatatagtgattttgacatcggagaaaacagtaaactttttcagaaagtggcaaagaaaggaactagtgtttatccatccaatggcactgctgttgaaaagcagaagctaggtgatgagaatcataatttttatatttctgagagtgaattgcagactcatgttgttccaacaccactctggtcaagatctggggtattttgcttcaccaattcccttacaatacagttcttttgttctgtttgacttctacatgtttgcacaattgcacgcataacacctgtgtgttgattgatgtccagatgcattttcaagtaatgggggatggagctctagaagcagacaatactggtataatttcaggtgaacttgaaatagaaaagctccagactcgcaatattgaatctaggtcaaagaatcttataccagtatttgaatctcttcatacatccaggtttcaacagtcaaggtatgctatgcacttttatttggcgattgatacattaggcattaactcaataatgtaaggcatctttcctgctggtaaaggccaaatgatgtcgtggattttttaatgtacaagaatggtctgttgatacttttggttttgttagctccctctcgtgctaacctttttcttctttccctatagggtgagcacacctgatagtaacaaatatggattgcttcagcgtcaaaagtccggattttcagaggacggtagactctcctgcagaagcagttctagctctttggactgcatgtctgaaggcccaattagcactgatgataatggttttggtcaatgtttagtagaagatagtggtggtgctgtaaataagaacccaaatgttaacccccgttccgagcttgtaaataatactcagagccttaacacagaggcccagctcggatttgtaaataacaaagaggattgtgaagacagagagcaactcccagatttgtgatagcaactgtgatcaaaggtaagtactgtatcaccttttgcctgtgcatcagcatacgtgcatttttctgaggaactgtattgcatctgaactatcctacgttgactagtgagccattccttcctgccaatggattatgatgtagatcttaattcttgtcacatggttttgcagcctttcaatatgtacagctgacattctaaatgtgtgatattactattttttgggggtattgaaattccttaatctaatacattgccatgggctcttggcatgccttgcagacgatcactggtgatggaggagcttcttgaatcgcaagtcttcattgtgcgtgtgtagctgctattctttcatttctcctcctggagttcttgacctctcttctatagctctatttataagcattcatgataaatttactgataaaaaaatgaaggggaggtcgaattaaggcccaatgggtatgggagcggtggtgctgtgaagttgggtttccatcttacaaaagaacgtgcacataacaagattgttcattgcattttcaataatagctcttaatttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0786900, RefSeq:Os01g0786900