Os01g0789000

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0789000| Description = Cyclin-like F-box domain containing protein| Version = NM_001051020.1 GI:115440410 GeneID:4325866| Length = 2004 bp|...")
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Gene Name

Os01g0789000

Description

Cyclin-like F-box domain containing protein

Version

NM_001051020.1 GI:115440410 GeneID:4325866

Length

2004 bp

Definition

Oryza sativa Japonica Group Os01g0789000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35240632..35242635

Sequence Coding Region

35240632..35240987,35241181..35241280,35241769..35242635

Expression

GEO Profiles:Os01g0789000

Genome Context

<gbrowseImage1> name=NC_008394:35240632..35242635 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35240632..35242635 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagtgacactgatttgatcagtgtgctgcctggagaggtcctacagcatatcctgtccttttcaaggattagagcaattgtgaggatgcgcaggctttctaggaggtggatgagagtgattgagtgtctgcagttcatatgccttgattacagagattttaaacattggaaggttgagaaatttgctcgctttgtggacaacctattactcatccgttctaaagtagacctgcatactttccagctttattggtttcattatcttccactgaactgcaatgatcttaggaagtggatcctctatgcggtgaagcacaatgttaaagtgcttgatgtggaactggatatgtatgataaaacggccttaccgtctcgcattttcacctgccgttcagttgaggagctaagtttgcagatgggagaagcccctgatgaagatcttgaacacgtaggccttgtgcttccggacataattcaacttccttctctcaaaaagttgactctctctgatgtagaagtggaccagctttctctgaaccaattcatcggtcggagccctaacctagaagatttgcatttgataaactcggcaacatatcttgatctgattgcctccaaagtgctaaaaaggctaactcttgatggcttcatgcatgggcccaaaagattcacaatttccgcccctcatctcgttcactttgagtgccagggttgtgcactgcaagatgtttcttggggagagaaaccatctctagagagtgcacacatagatacttgggggaagaaatatgatggtgaatctgagtttattggagtacttttatctgccaagacactcgcactatttggttctgacgtcaagttcttagttatgacttgctcactcactcaatacaaggttatgttggaaaaggagctgccggcatgtccagtgtttgagaggctcacaactcttgaaattgcaagaaaaggagcagaaacagatgctatgccaattgatggaatgaccttccaatgtccgttccttgagactgtcataatacaatgttccaagggcgatgatgggatcaacaagctggtgaatgttctggcagcaaatgggattaacccaaagaagatacaggttaatttctatgaagatatcgaagagatggagcgggctgagaacaggcgcatcatagaggagcgggagaaggagctgtgcaacttcgagaagatggcgaagaaaaacccagaatgggtcgacgaaagccgttatgctgacagtaaccctgaaactgatagcgatgagtatgatgatgactacgatgatttctag</cdnaseq>

Protein Sequence

<aaseq>MESDTDLISVLPGEVLQHILSFSRIRAIVRMRRLSRRWMRVIEC LQFICLDYRDFKHWKVEKFARFVDNLLLIRSKVDLHTFQLYWFHYLPLNCNDLRKWIL YAVKHNVKVLDVELDMYDKTALPSRIFTCRSVEELSLQMGEAPDEDLEHVGLVLPDII QLPSLKKLTLSDVEVDQLSLNQFIGRSPNLEDLHLINSATYLDLIASKVLKRLTLDGF MHGPKRFTISAPHLVHFECQGCALQDVSWGEKPSLESAHIDTWGKKYDGESEFIGVLL SAKTLALFGSDVKFLVMTCSLTQYKVMLEKELPACPVFERLTTLEIARKGAETDAMPI DGMTFQCPFLETVIIQCSKGDDGINKLVNVLAANGINPKKIQVNFYEDIEEMERAENR RIIEEREKELCNFEKMAKKNPEWVDESRYADSNPETDSDEYDDDYDDF</aaseq>

Gene Sequence

<dnaseqindica>1649..2004#1356..1455#1..867#atggagagtgacactgatttgatcagtgtgctgcctggagaggtcctacagcatatcctgtccttttcaaggattagagcaattgtgaggatgcgcaggctttctaggaggtggatgagagtgattgagtgtctgcagttcatatgccttgattacagagattttaaacattggaaggttgagaaatttgctcgctttgtggacaacctattactcatccgttctaaagtagacctgcatactttccagctttattggtttcattatcttccactgaactgcaatgatcttaggaagtggatcctctatgcggtgaagcacaatgttaaagtgcttgatgtggaactggatatgtatgataaaacggccttaccgtctcgcattttcacctgccgttcagttgaggagctaagtttgcagatgggagaagcccctgatgaagatcttgaacacgtaggccttgtgcttccggacataattcaacttccttctctcaaaaagttgactctctctgatgtagaagtggaccagctttctctgaaccaattcatcggtcggagccctaacctagaagatttgcatttgataaactcggcaacatatcttgatctgattgcctccaaagtgctaaaaaggctaactcttgatggcttcatgcatgggcccaaaagattcacaatttccgcccctcatctcgttcactttgagtgccagggttgtgcactgcaagatgtttcttggggagagaaaccatctctagagagtgcacacatagatacttgggggaagaaatatgatggtgaatctgagtttattggagtacttttatctgccaagacactcgcactatttggttctgacgtcaaggtatattcgcaaaagacaagcctgctgtcttttgttacttctctactcttttgttttgcaaaaatcttgactatatttattctagttaactactctgaatgaaaatgtgcatggcttgaaactataccaacttggtatctagggcttgtgtaaccgactagaatcttggggatttgatatggaaaaaagggttctattctggaaagatcagatcatagctgtgtctgtgtctacttgctgtatatcttttctaattttgcccttcgtatatgtgtcctgcaaaaagagtaagtttgctagttcagtaattagtagttcctttgatctgttagtttctcccatacaactttcaaagctgtcagctgtagtatgaaaaatttgtacgatatggtctcacggtaatctcatgggatgaatgtggaattttctttcacatgtcaatattacattgttattatgcttggagtttggaaatgtcctggttttagttcttagttatgacttgctcactcactcaatacaaggttatgttggaaaaggagctgccggcatgtccagtgtttgagaggctcacaactcttgaaattggtaagtggtgtttaactgaggatttctatactgtgcttcgtttccttcaactttcgccgagactaggagaactgacattgatgcaagaggaggtatgccgcacgtaaaaatcttgcatcatattggaaattcctcattaaatacacccctctttttatttatttcctgttatgtctctagcttcctcacgcagcaagaaaaggagcagaaacagatgctatgccaattgatggaatgaccttccaatgtccgttccttgagactgtcataatacaatgttccaagggcgatgatgggatcaacaagctggtgaatgttctggcagcaaatgggattaacccaaagaagatacaggttaatttctatgaagatatcgaagagatggagcgggctgagaacaggcgcatcatagaggagcgggagaaggagctgtgcaacttcgagaagatggcgaagaaaaacccagaatgggtcgacgaaagccgttatgctgacagtaaccctgaaactgatagcgatgagtatgatgatgactacgatgatttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0789000, RefSeq:Os01g0789000