Os10g0511400

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0511400| Description = Peptidase S28 family protein| Version = NM_001071574.1 GI:115482891 GeneID:4349092| Length = 5248 bp| Definition = ...")
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Gene Name

Os10g0511400

Description

Peptidase S28 family protein

Version

NM_001071574.1 GI:115482891 GeneID:4349092

Length

5248 bp

Definition

Oryza sativa Japonica Group Os10g0511400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20132486..20137733

Sequence Coding Region

20132606..20132806,20133538..20133663,20133827..20133982,20134062..20134244,20134343..20134459
,20134967..20135020,20135100..20135171,20135386..20135497,20135627..20135723
,20135873..20135967,20136532..20136606,20136746..20136829,20137041..20137139
,20137340..20137392

Expression

GEO Profiles:Os10g0511400

Genome Context

<gbrowseImage1> name=NC_008403:20132486..20137733 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20132486..20137733 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccagcgccgtcggcgccgcagtcgccgccgtggcggtgctcctgctgctggctcccggggcggagccgatcgggctgtggctgccgcctcccaccggtggcggggggcgcctcggcggcgccgccgcaccaggcaggtacctgacgcaggaggagcggtggatggaccagaccctcgaccacttcaaccccaccgaccatcggcaattcaagcagcgttactatgaattccttgattactaccgagctccaaaagggccaattttcttatatatctgtggagaatcttcgtgcaacgggattcctaacagctacttagctgtgatggcaaagaagtttggtgcggcagtggtctcccctgagcatcggtactacggaaagagttccccttttgagagtttgacaacggaaaatctaaggttcttgtcatcaaaacaggccttgtttgatctggctgttttccgccaatattatcaggaaactttgaatgctaagtataatcgctcaggagcagacagttcttggtttgtttttggagggtcgtacgctggagcacttagtgcttggttcagattgaagttccctcacttgacatgtggaagtcttgcgagttcaggagttgttctttctgtttacaactatactgactttgacaaacagattggtgagtcagctggccctgaatgcaaagcagcactacaagaaacaacaaaacttgttgacggacaacttcagtctggtcgcaatgcagttaaacaactctttggagcatcaacgttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcgttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatggcacagatttggtggaaacatttgctcgctatgtgaaagattattacataggaacatttggagcatcagttgcatcatatgatcaagaatatttgaagaacacaactccacctcctgctgaatctgcatataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaaaaaatgatagtgtccgttctgcaaagattgacacaaggtaccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatgacaaatttatactatggaggcacaagaattgcaggttcgaaaattgtttttgcaaacggctctcaagatccatggcgccatgcttctaagcagaaatcatcaaaagaattgccgtcatacttaattgagtgcagcaattgcggacattgcagtgatctatctggatgccctcaagctccttcacatattgaaggtgactcgtctaattgttcatctccagaagctgtgaacaaagtaagaaagcagatcgtcgatcacattgatttatggttatcagaatgtcaagagcaaggacacgacaatgagccattgctgggcagtagatggagcatagctacttactga</cdnaseq>

Protein Sequence

<aaseq>MASSAVGAAVAAVAVLLLLAPGAEPIGLWLPPPTGGGGRLGGAA APGRYLTQEERWMDQTLDHFNPTDHRQFKQRYYEFLDYYRAPKGPIFLYICGESSCNG IPNSYLAVMAKKFGAAVVSPEHRYYGKSSPFESLTTENLRFLSSKQALFDLAVFRQYY QETLNAKYNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTCGSLASSGVVLSVYNYTD FDKQIGESAGPECKAALQETTKLVDGQLQSGRNAVKQLFGASTLANDGDFLFLLADAA AIAFQYGNPDALCSPIVEAKKNGTDLVETFARYVKDYYIGTFGASVASYDQEYLKNTT PPPAESAYRLWWYQVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCRNVFGEGVYPDVF MTNLYYGGTRIAGSKIVFANGSQDPWRHASKQKSSKELPSYLIECSNCGHCSDLSGCP QAPSHIEGDSSNCSSPEAVNKVRKQIVDHIDLWLSECQEQGHDNEPLLGSRWSIATY</aaseq>

Gene Sequence

<dnaseqindica>121..321#1053..1178#1342..1497#1577..1759#1858..1974#2482..2535#2615..2686#2901..3012#3142..3238#3388..3482#4047..4121#4261..4344#4556..4654#4855..4907#atcctcttccacttctgacttctcgccaagggaggttgcttcgctttgcttgctcgcgtcggaaacgcatcgtctcctctccgccgccgcagcggaagcggaagcgcgcgcgagagagagatggcgtccagcgccgtcggcgccgcagtcgccgccgtggcggtgctcctgctgctggctcccggggcggagccgatcgggctgtggctgccgcctcccaccggtggcggggggcgcctcggcggcgccgccgcaccaggcaggtacctgacgcaggaggagcggtggatggaccagaccctcgaccacttcaaccccaccgttgagtcccgatctcccaccaccgcctcctctttcggtttctcggttgaattggttgatccgcgctcttgttcagttcctcgtttttgctcttcgtgcgcaacgggacaatgggttgggggaattggggatatggggaagtggatttgtgctgtgccgtcactttgcatcagtttggtctttggctctgtcggaatctagtcaatctatatcctagtatagtctccagtgtgagaactaagcgaattggtactgaattagcacgcccacgtccgcactggcacaatcgattgattttgaagctgggagaatttatggagtttgaggatgctaaagaaatttctgttttgtttcatagatttcatgtgagcttcacttttgataacgccattccgatgttcatgtcccgtacacataatgttcatgagactttcggacctcataaaaaggcaatcggtacttcagcggtataatgttgatgttcccctttgtatatatgttgtgtatctgaaaatttacgagcctgctagacttgctacataacaaactagcgcttcactgttgtccataatcccctcttgactagtgattcaagttgtttcaaatgtgatgtgatatggagtaatgttgatgcattctaccatcgttgttagatgttctctttctttctttctttctttctttctttttttttttggcattcatggacctttattttattttcaatgcaggaccatcggcaattcaagcagcgttactatgaattccttgattactaccgagctccaaaagggccaattttcttatatatctgtggagaatcttcgtgcaacgggattcctaacagctacttagctgtgagtatgctcaagtatatagttgtacagtttccaactggagcaattagacattatttgttacacattctaggtgtgatctatactttaagcatatggttatattttacttcacctgttttgataacatacacatgggatggtttgtgtgtgatgtgtgtaggtgatggcaaagaagtttggtgcggcagtggtctcccctgagcatcggtactacggaaagagttccccttttgagagtttgacaacggaaaatctaaggttcttgtcatcaaaacaggccttgtttgatctggctgttttccgccaatattatcaggtgggcataggaccgtttgtactgtctatgtccaaacgagtgtacctactgatctgagtttggcttctcttatttgaaggaaactttgaatgctaagtataatcgctcaggagcagacagttcttggtttgtttttggagggtcgtacgctggagcacttagtgcttggttcagattgaagttccctcacttgacatgtggaagtcttgcgagttcaggagttgttctttctgtttacaactatactgactttgacaaacaggtaactacaggtgcagatccttaatcatgttataatgttatcgcattttggcatgcacctaaaagttctacctttctgcatgattcacatctctgaagattggtgagtcagctggccctgaatgcaaagcagcactacaagaaacaacaaaacttgttgacggacaacttcagtctggtcgcaatgcagttaaacaactctttggagcatcaacggtaatcctctatgtgatatgcaagtatatttcttttgctttgacagcttactgatttttatattacctgcctggtttcagtatgacaaaacatgaaaggagaaaactgtataaagaggtcaagctaactttaagggtaaagtagtggtgctaaaaaatagcttctcaaatatattaaatatttccctgactttgcattctgaaacttgtttggagatcatgtaataatctagtgggttccgttcagttttcagacaactggcattgttataccaaactaagaaactgcttatcaaaaatatattatggagtatccaagtctatggaccttctataatttcattagaactaagtttgaagtgaaccgccacgtccttaaactgccattgtgcacttgtgccatcaaccttatgaccacttatgttagttccttgcatggtataaaatatcatttgaatgctctaatagtgtatttaattatttaccaacttctttcggatgcttgcagttagcaaatgatggtgacttcctctttctactggcggatgcagcagctattgcggtatgctaaatgtacatttattttgactttataatctgtcagatgcaattgttgtattaaaatcttataccatgtgcagttccaatacggtaatcctgatgctttgtgctccccaatagttgaagcaaagaagaatggcacagatttggtggtaagtaatacctccctttggtgataggaattaagaatgatctgagataggttgaaaggataaagttgccagcaattccagatacacacatacaaaaaaaaaacatgtttgtaatcattagtaagcatgtgataagtccttgtcaaacttgactcttatttagttgttccaccatgccttttggtgaccttgcttgctctattctgctgtgcaggaaacatttgctcgctatgtgaaagattattacataggaacatttggagcatcagttgcatcatatgatcaagaatatttgaagaacacaactccacctcctgctgaatctggtaattacgaaccctgatattctatattaccaaatgtcatgctttgagaatttgaaatgcagcacttaatgaatagacagtggccaattgtttatgttgcctatgcatttaattattgattttatttagcatataggttatggtggtaccaagtttgcagtgaagttgcatatttccaagtggctccaaaaaatgatagtgtccgttctgcaaagattgacacaaggttactagatctactttcctcaaataaatattccactggaagctatcttaccttatcgatttagatctgctatctataatcttctctttttcaagatgtgactatgcttctagatattgtatttatataagttcctcttttctttctaggtaccatttggacttgtgcagaaatgtttttggggaaggagtttaccctgatgtattcatgacaaatttatactatggaggcacaagaattgcaggtatatcatttttttctttgaataattagcttcaatcatgttacctgttttgtttcttcaagtatggtcgtttggatctcaattaaggtatggtgctagtctgcagcaagctacaatattattttttacttaaccttgaaactcttccccttcccctctctaaatggaaaaactagacaagagatgaagagagaaataacaaccacaaggttctagatgttcatattactggatcatattgtgtgcctcaagtgattgagctgcactagtaatgcaagtgtgtaaaggtcatgctcagtgagtgatggtaaatagaagactagagagttaaatggccttatatgattatatctgcagtgctaatagccgctttttatcacaaacaagttccatatattataacgatatcatgaattttgaatggatattatggataaccaagaatgtgcataatggtctgtgggaagtactgtgtatgcagtatgacatccaaagcctataatcattattctgcaggcaatcaattcttgtattttttttaatcaatatactgcatgcctgcaggttcgaaaattgtttttgcaaacggctctcaagatccatggcgccatgcttctaagcagaaatcatcaaaagaatgtgagcatctgtacagtcctggccatttctttgtttcaatagcactgtttttgtatctcatatgagcatggttaaatagtgtgaatgcattttttatggcattatgatatgcttacaaattatttttcaatgggtacagtgccgtcatacttaattgagtgcagcaattgcggacattgcagtgatctatctggatgccctcaagctccttcacatattgaaggtacatccaacattccagcctttgctgaagcctctcttgaggacagtactgcagggaaaatgtgactttcctttttagctgtagattttaacttaaactagagacttgataactgtctttgcctcgtctagtattaagatatatcaagtctctagtttgagttgtgagttgtgaccaagcccataatatgtttgtattttgtgtttaccaggtgactcgtctaattgttcatctccagaagctgtgaacaaagtaagaaagcagatcgtcgatcacattgatttatggttatcagaatgtcaagagcaaggttggttttggctgtccagctattatactattgaactatagtgattgcaaaaaaaaaaaagaaagttataactaatacatccatattagttgttctgagcttctgcttttctcgatcactctgacttcgtgacaaacacatttgcagttcacttcaaattcaattttggtcaatgacatctttgctctacctaatctcaggacacgacaatgagccattgctgggcagtagatggagcatagctacttactgattacctgctcgagctaccaaccatatgttcaaaaggccatgagtacaagacaatgcagctgtcatttagactagtatgattcactcaaataatacggacagttggttgttccaagcattctcatggtaccaagcattatcctcaggactgcggtaacaattgctcaaacactactatggtgacgacctctgtcatttgtcaataaccttacaggttgctctcaggctcccccattctgcagaagattaccatgatatgtaaaatgttactgaattatgtacaagataaactttgtttattcatgagactaagatattagataaccgggtacatcctactcc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0511400, RefSeq:Os10g0511400