Os01g0793100

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0793100| Description = Similar to Polyphenol oxidase (EC 1.10.3.1) (Fragment)| Version = NM_001051031.2 GI:297597768 GeneID:4324128| Length...")
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Gene Name

Os01g0793100

Description

Similar to Polyphenol oxidase (EC 1.10.3.1) (Fragment)

Version

NM_001051031.2 GI:297597768 GeneID:4324128

Length

1136 bp

Definition

Oryza sativa Japonica Group Os01g0793100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35346372..35347507

Sequence Coding Region

35346372..35346582,35346648..35347507

Expression

GEO Profiles:Os01g0793100

Genome Context

<gbrowseImage1> name=NC_008394:35346372..35347507 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35346372..35347507 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcactctcccagctaatcacctgctctctatcatcaccgagcccctcctctccaggagcgagcttttgccttaagcctcgccgcggcgccgtcggacgggtctcgtgcacatcgtctcccgcggagcccgacgcctctaggctcgaccgccgggacgtcctcctcggtctcggcgcggccggtgcaagcgccacggcggcgggcatcctcctgtcgttcccgcgccgcgccggcgccgaccctgtcgcgacgcccgacatctcctcctgcggcccgcccgaccagctccctccgtccgccaacgtgctgacgtgctgcccgccgccctccagcgcctcgccggtggacttcgccccgcccgccgacgcgtcgtcctcgccgctccgcacgcgccccgccgcgcactccgccggcgcggactacgtcgccaagttcaaccgcgcgatcgcggccatgaaggcgctgccggcggacgacccccggagcttcgcggcgcaggcgagcgtccactgcgcctactgcgacgggtcgtacagccccgacgggttcccggggctggatctccaggtgcacaactcctggctgttcatgccgttccataggtgctatctctacttcttcgagcggatcctggggagcttgatcggtgatcccaccttcgccataccgttctggaactgggatgcaccggacgggatgagaatgccggcgatgtacaccgaccagtcctcaccgttgttcgatccccggcggaacgggcggcacgtgccgccgaagctgatcgatctggactacaatgggagggagccacggttcaccgacaaccaacaggttgatcacaacctacgtgtcatgtgcctacctgacatggctgttccagctgaagaggaggagaaggaaggagaacctgaagctgatgaagaacctactgatgatcaagactctgagggcataaggcgccaagatgaggaggaggacattcagaccaatactcaagtgccagttaggccatcaagaacgatgaagcccaacccccgttaccatgggcctgaatgggctgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MASLSQLITCSLSSPSPSSPGASFCLKPRRGAVGRVSCTSSPAE PDASRLDRRDVLLGLGAAGASATAAGILLSFPRRAGADPVATPDISSCGPPDQLPPSA NVLTCCPPPSSASPVDFAPPADASSSPLRTRPAAHSAGADYVAKFNRAIAAMKALPAD DPRSFAAQASVHCAYCDGSYSPDGFPGLDLQVHNSWLFMPFHRCYLYFFERILGSLIG DPTFAIPFWNWDAPDGMRMPAMYTDQSSPLFDPRRNGRHVPPKLIDLDYNGREPRFTD NQQVDHNLRVMCLPDMAVPAEEEEKEGEPEADEEPTDDQDSEGIRRQDEEEDIQTNTQ VPVRPSRTMKPNPRYHGPEWAV</aaseq>

Gene Sequence

<dnaseqindica>926..1136#1..860#atggcatcactctcccagctaatcacctgctctctatcatcaccgagcccctcctctccaggagcgagcttttgccttaagcctcgccgcggcgccgtcggacgggtctcgtgcacatcgtctcccgcggagcccgacgcctctaggctcgaccgccgggacgtcctcctcggtctcggcgcggccggtgcaagcgccacggcggcgggcatcctcctgtcgttcccgcgccgcgccggcgccgaccctgtcgcgacgcccgacatctcctcctgcggcccgcccgaccagctccctccgtccgccaacgtgctgacgtgctgcccgccgccctccagcgcctcgccggtggacttcgccccgcccgccgacgcgtcgtcctcgccgctccgcacgcgccccgccgcgcactccgccggcgcggactacgtcgccaagttcaaccgcgcgatcgcggccatgaaggcgctgccggcggacgacccccggagcttcgcggcgcaggcgagcgtccactgcgcctactgcgacgggtcgtacagccccgacgggttcccggggctggatctccaggtgcacaactcctggctgttcatgccgttccataggtgctatctctacttcttcgagcggatcctggggagcttgatcggtgatcccaccttcgccataccgttctggaactgggatgcaccggacgggatgagaatgccggcgatgtacaccgaccagtcctcaccgttgttcgatccccggcggaacgggcggcacgtgccgccgaagctgatcgatctggactacaatgggagggagccacggttcaccgacaaccaacaggttgatcacaacctacgtgtcatgtaccgccaggtatatgtgtgtgcaatgcgtgcatcgatgcagcgcgtctctacgaaattgtcaggtgcctacctgacatggctgttccagctgaagaggaggagaaggaaggagaacctgaagctgatgaagaacctactgatgatcaagactctgagggcataaggcgccaagatgaggaggaggacattcagaccaatactcaagtgccagttaggccatcaagaacgatgaagcccaacccccgttaccatgggcctgaatgggctgtgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0793100, RefSeq:Os01g0793100