Os01g0795000

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0795000| Description = Subtilase| Version = NM_001051042.1 GI:115440454 GeneID:4325624| Length = 4510 bp| Definition = Oryza sativa Japoni...")
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Gene Name

Os01g0795000

Description

Subtilase

Version

NM_001051042.1 GI:115440454 GeneID:4325624

Length

4510 bp

Definition

Oryza sativa Japonica Group Os01g0795000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35423875..35428384

Sequence Coding Region

35423879..35423968,35424059..35424150,35424317..35424414,35424647..35424802,35425895..35426514
,35426608..35426678,35426764..35427015,35427082..35427199,35427303..35427474
,35427558..35428099

Expression

GEO Profiles:Os01g0795000

Genome Context

<gbrowseImage1> name=NC_008394:35423875..35428384 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35423875..35428384 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagtccattcttgtcagcaccgtttggtttcattgctgctactttgtttttggatgctgttcatcagagcgcatggatcacgcaagctgtacatagcgtatctcggtgacagaaagcatgcacgcccagacgacgttgttgcttctcaccatgatacgctctcgagtgttcttggaagtaaagacgaatccttatcttccatcatctataactacaagcatgggttctcaggctttgctgccatgctgacagctgagcaggcagaacagcttgcagagttaccagaagtcatcagcgttcagcgaagcaggaggtacaggacggcgaccacacggagctgggacttcctggggctggattaccaaaagcccagtgaattactcagaaggagcaaccacggacaagagataatcatcgggattattgacaccgggatatggccggagtcaagaagtttcagcgacgaaggatacgggccggtgccggcacggtggaagggcgtgtgccaggtcggagaaggatggggcagcaacaactgcagccgcaagatcatcggcgcgcggttctaccacgccggggtggacgaggacgacctcaagatcgactacctctcgccccgcgacgcgaacggccacggcacgcacacggcgtccaccgcggcgggctccgtcgtggaggcggtcagcttccacgggctggccgcgggcaccgcccgcggcggcgcgccccgggcgcgcatcgcggtgtacaagtccgtctggggcaggggcggcgccgggtcagggaactccgccaccgtgctcgccgccatcgacgacgccatgcacgacggcgtggacgtgctatccctgtccctcgaggttcaggagaactcgttcggcgcgctgcacgccgtccagaaggggatcaccgtcgtgtacgccgcagggaactctggacctgtgccgcaggtggttgggaacacggctccatgggtcatcacagtcgcagcaagcaagatcgatcggtctttcccgaccgtgatcactctgggggacaagactcagatagtgggacagtccatgtacagcgaagggaagaactcatcaggaagcaccttcaaacttctagtagatggaggcctatgcaccgataatgatctgaacggcacggacataaagggaagagttgtgctgtgcacctccctcgggataccaccgcttatgcttttcccggtagcattgaaaaacgtcttggatgctgggggttcaggtctaatcttcgctcaatacacaactgacatcctggacgtcacaaaaaactgcaacggcactgcctgtgttcttgtggaccttgacactgcacaactgatcagctcatacatcagcggcacaagctcaccagtggcaaagatcgaaccaccacgcactgtcacgggtgaagggatactggcaccaaaagtggcagcattctcctcgagaggtccatcagttgattaccctgatattattaagcctgatgtagctgcaccaggatccaacattttagcagccgtgaaagacggatacaaacttgagtcaggaacatcaatggcaacgccacatgttgcaggcattgttgcgctgctgaaagctctccatccagactggtctccagctgcaataaaatcggcagttgttactactgcgtctgtaactgatgaacgaggcatgccaatactggcagaaggagtgcctcggaagatcgctgatccgtttgactacggaagtggaaacattaacccaaacagggcagctgatcctggcctcatttatgacatcgacccaacagattacaacaagttctttgcgtgcaccatcaagacatctgccagctgcaatgcaacaatgctacctaggtatcacctgaacctaccatcaatcgctgttcctgatctcagggatccaacaactgtatctagaacagttagaaatgtaggtgaggttaatgcagtttaccacgctgaaatccagtgcccacctggagttaaaatggttgttgagccatctgttcttgtcttcgatgctgcaaacaaagttcacaccttcaaggttagtttttcacctctatggaaattgcaaggggactatacatttggcagccttacttggcacaatgacaacaagtcagtgagaattccaatagcagtccagatcaccatccaagatttctatgcagatgttgcataa</cdnaseq>

Protein Sequence

<aaseq>MEVHSCQHRLVSLLLLCFWMLFIRAHGSRKLYIAYLGDRKHARP DDVVASHHDTLSSVLGSKDESLSSIIYNYKHGFSGFAAMLTAEQAEQLAELPEVISVQ RSRRYRTATTRSWDFLGLDYQKPSELLRRSNHGQEIIIGIIDTGIWPESRSFSDEGYG PVPARWKGVCQVGEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDANGHGTHTA STAAGSVVEAVSFHGLAAGTARGGAPRARIAVYKSVWGRGGAGSGNSATVLAAIDDAM HDGVDVLSLSLEVQENSFGALHAVQKGITVVYAAGNSGPVPQVVGNTAPWVITVAASK IDRSFPTVITLGDKTQIVGQSMYSEGKNSSGSTFKLLVDGGLCTDNDLNGTDIKGRVV LCTSLGIPPLMLFPVALKNVLDAGGSGLIFAQYTTDILDVTKNCNGTACVLVDLDTAQ LISSYISGTSSPVAKIEPPRTVTGEGILAPKVAAFSSRGPSVDYPDIIKPDVAAPGSN ILAAVKDGYKLESGTSMATPHVAGIVALLKALHPDWSPAAIKSAVVTTASVTDERGMP ILAEGVPRKIADPFDYGSGNINPNRAADPGLIYDIDPTDYNKFFACTIKTSASCNATM LPRYHLNLPSIAVPDLRDPTTVSRTVRNVGEVNAVYHAEIQCPPGVKMVVEPSVLVFD AANKVHTFKVSFSPLWKLQGDYTFGSLTWHNDNKSVRIPIAVQITIQDFYADVA</aaseq>

Gene Sequence

<dnaseqindica>5..94#185..276#443..540#773..928#2021..2640#2734..2804#2890..3141#3208..3325#3429..3600#3684..4225#aaaaatggaagtccattcttgtcagcaccgtttggtttcattgctgctactttgtttttggatgctgttcatcagagcgcatggatcacgcaaggttagcaacttagcatgccttcttcaagaattgtttctcactcgagataatttaactcactcagaaatgtctcaatgccctctgttatagctgtacatagcgtatctcggtgacagaaagcatgcacgcccagacgacgttgttgcttctcaccatgatacgctctcgagtgttcttggaaggtgacctagctccgtcagttactcaatttaattacttcatattttgcaccctttcacctttctggttttgcacaaacggttccttggcgaaccatatgtactttcaaattcaagtgcataacaaaccgtttcttgaattcttgccaaccaaatgttgaactttcagtaaagacgaatccttatcttccatcatctataactacaagcatgggttctcaggctttgctgccatgctgacagctgagcaggcagaacagcttgcaggtcagttaatcctacctagaattaggttcacatcctctaccataatgatactaccattatagacactgatgtgtggaataataggagggtagaacccacatgttagtgattgtaatggtagtgccattatggtagaggatcaggataatcttggtctgcacaccaatcatagatacttcacacaaattctgattctgatgtgcggtttgcttgatgtacattgtatctccagagttaccagaagtcatcagcgttcagcgaagcaggaggtacaggacggcgaccacacggagctgggacttcctggggctggattaccaaaagcccagtgaattactcagaaggagcaaccacggacaagagataatcatcgggattattgacaccggttagtctagggggcatgttttaatttttttttgcgaggtttaaacgtttatggtggcgccatttctggtgcaatctagtaaataaactaggtgaaaccccgcgcattgttgcgggaatttagtatgataacaataaaaaataatgtgtaagatagttagataatatcagattaagtaaattaatatggtttatgataatttaaatttaaatagtatgtagaatgatgattcaaacgtaaaaagtaagctggtatgactttatggaaaaagaaaagtagggagatagtttggaccgtagattaatcatttaaaggttgtgatatgacttaattcgaggaaaaaaggagaaagataatttgaaccatagattaatcattgagtaaatttcacaaaactacagatactatggctaaattatcacaaaactacagttttaactcagtatatcacaaaactacacatttaagatgaagtgtcacaaaactacatgtttggtaactaaattatcataaaactataggtttaaaaccaatttaatcacaaagtaataatgcttatagctccaccataacaatagtgctagggatttaaactacaaaagttgtagttttgtgataagttcaatattaaatatgcatttttgtgatacttaacctaaaatctgtagttttgtgataaatttggtgctaaatgtgtagttttgtgatacaactccttaaatctgtagttttgtgataatttagtcaaaatacctgtagttttgtgaaatttactcttaatcatttaaacaattactaagtgaggataaactatataagtatataggatgtcataaaagataataaagatatacattgaaacattatgtgaattatattggatgataatttaacatgtttgtatttgaaaaactcttaaattataaaaactataaagatatagtatatttgcatgatgtttaaatgtaatgattgttgttggatgatgatgtgacatcttgttagtagatgatgatatggcatctttgcatgtcaagtttaagaagttagtgggggataactttatagtaagataggatgcacttgccacagggatatggccggagtcaagaagtttcagcgacgaaggatacgggccggtgccggcacggtggaagggcgtgtgccaggtcggagaaggatggggcagcaacaactgcagccgcaagatcatcggcgcgcggttctaccacgccggggtggacgaggacgacctcaagatcgactacctctcgccccgcgacgcgaacggccacggcacgcacacggcgtccaccgcggcgggctccgtcgtggaggcggtcagcttccacgggctggccgcgggcaccgcccgcggcggcgcgccccgggcgcgcatcgcggtgtacaagtccgtctggggcaggggcggcgccgggtcagggaactccgccaccgtgctcgccgccatcgacgacgccatgcacgacggcgtggacgtgctatccctgtccctcgaggttcaggagaactcgttcggcgcgctgcacgccgtccagaaggggatcaccgtcgtgtacgccgcagggaactctggacctgtgccgcaggtggttgggaacacggctccatgggtcatcacagtcgcagcaagcaagatcgatcggtctttcccgaccgtgatcactctgggggacaagactcagatagtggtaggaggcgcaaatgcgaaccatttatcacctcatggtgtgtgctcaactgctcaacggctgatcttgtgcgaaactctggctattttgcagggacagtccatgtacagcgaagggaagaactcatcaggaagcaccttcaaacttctagtagatggaggcctgtatgaaaaaaaatgcctttgccaatatttttttctgcttaatttataagaagctaatgagctgttcgttttcttgtgtggatagatgcaccgataatgatctgaacggcacggacataaagggaagagttgtgctgtgcacctccctcgggataccaccgcttatgcttttcccggtagcattgaaaaacgtcttggatgctgggggttcaggtctaatcttcgctcaatacacaactgacatcctggacgtcacaaaaaactgcaacggcactgcctgtgttcttgtggaccttgacactgcacaactgatcagctcatacatcagcggcacaaggtaaaacaaattgcaaacttctctaatgagttcaacacttcctaaactattatcgtatttaagcagctcaccagtggcaaagatcgaaccaccacgcactgtcacgggtgaagggatactggcaccaaaagtggcagcattctcctcgagaggtccatcagttgattaccctgatattattaaggtagctaactccaacttagcactcagctaggcgctagaggttcatccgatgaaagccggggaatttcttcatcttaccagcggtctggttgcttctgtaacagcctgatgtagctgcaccaggatccaacattttagcagccgtgaaagacggatacaaacttgagtcaggaacatcaatggcaacgccacatgttgcaggcattgttgcgctgctgaaagctctccatccagactggtctccagctgcaataaaatcggcagttgttactactggtacagaaattcaataccccaacctctaaatcgttcctgtgattttctgcaatcttacccatgtttcattttgcatactgaagcgtctgtaactgatgaacgaggcatgccaatactggcagaaggagtgcctcggaagatcgctgatccgtttgactacggaagtggaaacattaacccaaacagggcagctgatcctggcctcatttatgacatcgacccaacagattacaacaagttctttgcgtgcaccatcaagacatctgccagctgcaatgcaacaatgctacctaggtatcacctgaacctaccatcaatcgctgttcctgatctcagggatccaacaactgtatctagaacagttagaaatgtaggtgaggttaatgcagtttaccacgctgaaatccagtgcccacctggagttaaaatggttgttgagccatctgttcttgtcttcgatgctgcaaacaaagttcacaccttcaaggttagtttttcacctctatggaaattgcaaggggactatacatttggcagccttacttggcacaatgacaacaagtcagtgagaattccaatagcagtccagatcaccatccaagatttctatgcagatgttgcataacctgggcaaaacatgcaggcaataacacagtgctcttagaggcaatagagcaaaatacaggatataccaatttccacagagatatggttgcttgtaaatacttatcaccagaataatgagttaatgaccggccaatgttgactggtcaatgtatttcatttctatcacgtatctgattatcacttcgatggatggtcaatttcataccatgttggttacagaaatacaaaaatgttcaggtctatgtcatgccatgtcttaaaatatcatgtagtttttcctccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0795000, RefSeq:Os01g0795000