Os01g0795100

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0795100| Description = Similar to Subtilase| Version = NM_001051043.1 GI:115440456 GeneID:4325625| Length = 5313 bp| Definition = Oryza sa...")
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Gene Name

Os01g0795100

Description

Similar to Subtilase

Version

NM_001051043.1 GI:115440456 GeneID:4325625

Length

5313 bp

Definition

Oryza sativa Japonica Group Os01g0795100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35430251..35435563

Sequence Coding Region

35430251..35430488,35430607..35430679,35431373..35431429,35431558..35431655,35432070..35432225
,35432332..35432954,35433072..35433148,35434139..35434393,35434538..35434655
,35434762..35434933,35435022..35435563

Expression

GEO Profiles:Os01g0795100

Genome Context

<gbrowseImage1> name=NC_008394:35430251..35435563 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35430251..35435563 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccgaggcgacgactgctggccagagttggctcgccgcacggcggcgccgccgtgccggtgttggattcgacgatcctgtacatggagagagagtcggatatgggatgccttctttctggcctcgaagcacaaaatgggccttgtgctccgaagtggacctaatagggcccttgaataactggaccctgtccagattaactgggccgagccacgaaaggcctgagccattcagcctaagttctgattcaacactctcacatctaaaacaaaagattaaacccttttaccacttcaaaggaaagagcacccaccccgacgatgtcatcgcttcacaccatgatatgctcaccactgttcttggaagcaaggaagattctttggcctctatcatccacaactacaagcatggtttctcaggcttcgccgtgatgcttactgaagatcaagcaaagcaacttgcagaatttccggaagtccttagtgtggaaccaagcaaaacgtatacgacggcgaccactcggagctgggacatgcttggactgaactacagaatgcccactgaactgctccagcgaaccaactacggcgaggagataatcattggcattgttgacactggtatatggccggagtcgagaagcttcagcgacgaaggttacgggccggtgccggcacggtggaaaggcgtgtgccaggtcggcgaaggatggggcagcaacaactgcagccgcaagatcatcggcgcgcggttctaccacgccggggtggacgaggacgacctcaagatcgactacctctcgccccgcgacgcgaacggccatggcacgcacacggcgtccaccgcggcgggctccgtcgtggaggcggtcagcttccacggcctgggcgagggcgccgcccgcggcggcgcgcccagggctcgcatcgccgtgtacaagtccatgtggggcagcggcagcggcgcggggtccgggagcaccgccaccgtgctggccgccatcgacgacgcgatccacgacggcgtggacgtgctgtcgctctccctggggaccctggagaactccttcggcgcgcagcacgccgtccagaaggggatcaccgtggtttacgccgccatgaaccttgggcctgcgcctcaggtggttcagaacactgccccttgggtcatcaccgtcgcggcgagcaagatcgatcggtccttcccgacggtgatcacgttgggtgacaagcgacagatagtgggacaatctctctactctcaagggaagaactcatcgctcagcggtttcagacgccttgtcgttggagttggaggcaggtgcacagaggatgctctgaatggcacggatgtcaaaggaagcattgtgctgtgcgcatcttttactctcaacaaaccatctatccttttccaagaagctctaggaaacgtcgtgaaaggcggaggggtgggcatgattttcgttcagtatacgtgggatattgtaagttcgacagccagatgcaacggtattgcgtgtgttattgtggactattacacagtgaaacagatcggaaaatacatactcagtgcaagttcacccattgtgaagatcgatccagcacgcaccgtaacggggaatgagataatggcaccaaaagtggcagatttctcttcaagaggcccttcaactgattaccctgaaattatcaagccagacatagctgcaccaggattcaacatcttagcagcagtgaaaggcacatacgcatttgcctcagggacgtcaatggctactccgcatgtagcaggcgttgtcgcgctgctgaaagctctgcatccaagctggtcacctgctgcactaaaatcagccatagtcaccacagcatctgtaactgatgagcgtggcatgcccatactggccgaagggttgcctcggaagattgctgacccatttgactatggaggcgggcacatcaaccctaacagagcagctgatcctggcctgatttacgacattgatccaagcgattacaacaaattctttggatgcactgtaaagccatatgtaaggtgcaatgcgacatcgttgcctgggtattatctgaacctaccgtccatctcagttcccgatcttaggtatccggtcgtcgtatcaagaacggtcacaaatgtagctgaggttgatgctgtttaccacgctgcaatcgagagcccacctggcgtaaagatggatgttgagccacctgttctggtgttcaatgctgcaaacaaagttcatacgttccaggtaaagctttcacctctatggaagctgcagggggactacacgtttgggagccttacttggcacaacggccagaagacagtgagaatcccgatagcagtcaggattacaattcaggatttctacgcagacattgcataa</cdnaseq>

Protein Sequence

<aaseq>MTEATTAGQSWLAARRRRRAGVGFDDPVHGERVGYGMPSFWPRS TKWALCSEVDLIGPLNNWTLSRLTGPSHERPEPFSLSSDSTLSHLKQKIKPFYHFKGK STHPDDVIASHHDMLTTVLGSKEDSLASIIHNYKHGFSGFAVMLTEDQAKQLAEFPEV LSVEPSKTYTTATTRSWDMLGLNYRMPTELLQRTNYGEEIIIGIVDTGIWPESRSFSD EGYGPVPARWKGVCQVGEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDANGHG THTASTAAGSVVEAVSFHGLGEGAARGGAPRARIAVYKSMWGSGSGAGSGSTATVLAA IDDAIHDGVDVLSLSLGTLENSFGAQHAVQKGITVVYAAMNLGPAPQVVQNTAPWVIT VAASKIDRSFPTVITLGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTEDALNGT DVKGSIVLCASFTLNKPSILFQEALGNVVKGGGVGMIFVQYTWDIVSSTARCNGIACV IVDYYTVKQIGKYILSASSPIVKIDPARTVTGNEIMAPKVADFSSRGPSTDYPEIIKP DIAAPGFNILAAVKGTYAFASGTSMATPHVAGVVALLKALHPSWSPAALKSAIVTTAS VTDERGMPILAEGLPRKIADPFDYGGGHINPNRAADPGLIYDIDPSDYNKFFGCTVKP YVRCNATSLPGYYLNLPSISVPDLRYPVVVSRTVTNVAEVDAVYHAAIESPPGVKMDV EPPVLVFNAANKVHTFQVKLSPLWKLQGDYTFGSLTWHNGQKTVRIPIAVRITIQDFY ADIA</aaseq>

Gene Sequence

<dnaseqindica>1..238#357..429#1123..1179#1308..1405#1820..1975#2082..2704#2822..2898#3889..4143#4288..4405#4512..4683#4772..5313#atgaccgaggcgacgactgctggccagagttggctcgccgcacggcggcgccgccgtgccggtgttggattcgacgatcctgtacatggagagagagtcggatatgggatgccttctttctggcctcgaagcacaaaatgggccttgtgctccgaagtggacctaatagggcccttgaataactggaccctgtccagattaactgggccgagccacgaaaggcctgagccattcagccgtattcagcgatgccgcttaagatgatcccagtagattcctagttagacactacgatgtaaacctgagaatgaaatcactaattactgattcaaccctttaaatcttcatgcaatcagtaagttctgattcaacactctcacatctaaaacaaaagattaaacccttttaccacttcaaaggaaagagcacgtaagttgacagctactttccgttgcaggacatggtcgcgataaggagatggatgatgcatatgcttgtttctttaattaaggatcttacatatggttgagaaattgattgatcataagtaacatagccaactgagcttcagcatgggtgctccaaccatatgtaatcagggaaaaaaaaaagaatactccagcaataagtcagcgtagttacagttacatgaaccggtctaaggaaaacggatgcgctcgtcacatgaacgacaaacaaacccaaatgtaaactttgaaattaccgtatctatgaagctaatcaaatggaaagaacaagagaacgggaaaataacaggtgcactcggggaagaactcaacctccagacacctacaaatactagtcgacgagattgcacgaaatggtgaagagcctgtgagagtagagtagagtcactctagtatatgcgaaatgggattatattcttcttctcgtgcaattctactactttacttttgcacattgttgttcagagcacacggatctcgtaaggtagttataactaagcgtgcatgctcattgtatgcttgaattacacagtactgtttaaattaaggagtacataactagttcagacatgtcgctaattaaccgcctgcacctctagctttacatagcatatctcggtgatgtaaaacacagccaccccgacgatgtcatcgcttcacaccatgatatgctcaccactgttcttggaaggtatgcgtacccattgtcagtttaaccatgcttaatttgtatgatcactttgatttatctacggttattttataatgtgcttcgccgtcgacgaattagttaagtatgtgtattcgtaaactttttagcaaggaagattctttggcctctatcatccacaactacaagcatggtttctcaggcttcgccgtgatgcttactgaagatcaagcaaagcaacttgcaggtcagggttttgtcatctaaccctgtgtgtttttcaattgctaacaatgcctttgttaataactgatttggtcaattcatgtactccctctgtttcacaatgtaagtcattctaacattttctacatttatattgatgttaatgaatctatacatatatatctatctagattcattaacatcaatatgaatgtggaaatgaatctatacatatatatctatctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggatggagtatattttaacttttggagttctttttctcattagggctttctcctagggattaatagaacaagacctaatgggatatagcccctggttatatatattgtcatattaattcgcattcttttacagaatttccggaagtccttagtgtggaaccaagcaaaacgtatacgacggcgaccactcggagctgggacatgcttggactgaactacagaatgcccactgaactgctccagcgaaccaactacggcgaggagataatcattggcattgttgacactggttagaatttgataaaagtcgattactgcatgatcttactcaatgaacaaattaaatgatctgtgcagatgcattaatttcgcgtcaaagctttcgcgtactacaggtatatggccggagtcgagaagcttcagcgacgaaggttacgggccggtgccggcacggtggaaaggcgtgtgccaggtcggcgaaggatggggcagcaacaactgcagccgcaagatcatcggcgcgcggttctaccacgccggggtggacgaggacgacctcaagatcgactacctctcgccccgcgacgcgaacggccatggcacgcacacggcgtccaccgcggcgggctccgtcgtggaggcggtcagcttccacggcctgggcgagggcgccgcccgcggcggcgcgcccagggctcgcatcgccgtgtacaagtccatgtggggcagcggcagcggcgcggggtccgggagcaccgccaccgtgctggccgccatcgacgacgcgatccacgacggcgtggacgtgctgtcgctctccctggggaccctggagaactccttcggcgcgcagcacgccgtccagaaggggatcaccgtggtttacgccgccatgaaccttgggcctgcgcctcaggtggttcagaacactgccccttgggtcatcaccgtcgcggcgagcaagatcgatcggtccttcccgacggtgatcacgttgggtgacaagcgacagatagtggtacgctacgttcaaacttcgaagttcaaaacgccgtgccacgaagaacaagagtgtgccgtgcatgcgttgattatatgtactctgctgatgcatatcaaatcttcccattttcagggacaatctctctactctcaagggaagaactcatcgctcagcggtttcagacgccttgtcgttggagttggaggcaggtaaataattaaagtctttccttttctcccaaaaaaaatgtggagtacggttttgctatatgtttatcaacattttttccctcagaatcacttgaatttttaacggttagattttgcattgagattcacgttttcttttgcgtcgtcgttctcacgtgaagcgcagtcgcatctggcctcgctcgctccttgttgttcgctctggttgtggtagagtttttctttacttcttgtacgttgacctgctcctcgagtagcaaaaacagtaatgtattatgtactaccacacttctggttgtagagtattccgtccgttccatttcaggttataaatcgtgttggtcaaagtcaaactatttaaagaccaaattttatagataaatatagtaatatttacaacaccaaattagttaaattaaatttataattgaatatatttttatgatatatttgtcttgagttgaaattattattattattttctataaacttagtcaaacttagagcagtttaattctgaccaaaatcaaaacgtcttataacttgaaacggagggagtagtaagttactatgcaaaggtcacatatgacatcttgtgctttttttaatcaagaattatgtctatagctactgttgttttaccaatttaccacttagtcaaacttagagcagtttaattctgaccaaagtcaaaatgtcttataacctgaaacggagggagtagtaagttactagttttatctattagtgtcaacatcggggaaaaaaaagatagtatgcagtaagtacggacatgattgatatgaagtaacaagtgtggcagcacaagttcatgtctagtaatttagaatttaaacacagattatgtgtttaaagtcaccctagatatctaagcagtcacttgttaaattaaactgcttaattctttgtgaaaatgtcacgagctcggaagctgatacaatttcacttggcttttctatggttaattaggtgcacagaggatgctctgaatggcacggatgtcaaaggaagcattgtgctgtgcgcatcttttactctcaacaaaccatctatccttttccaagaagctctaggaaacgtcgtgaaaggcggaggggtgggcatgattttcgttcagtatacgtgggatattgtaagttcgacagccagatgcaacggtattgcgtgtgttattgtggactattacacagtgaaacagatcggaaaatacatactcagtgcaaggtaacacacttcctgatcaattcatacgtgctctcaaataaagatataaagttaagatcttaagtttaagaaagatacagatacaatatttggatcaattgaatagtttgcaatggcatgacacaattctggttgtccgagcagttcacccattgtgaagatcgatccagcacgcaccgtaacggggaatgagataatggcaccaaaagtggcagatttctcttcaagaggcccttcaactgattaccctgaaattatcaaggtacctagaccaccacacacacacacacacaaatccacgtctccactggtgtctcacaagccatataatcatttgaaatctaacttcagtcttgcttctttaacagccagacatagctgcaccaggattcaacatcttagcagcagtgaaaggcacatacgcatttgcctcagggacgtcaatggctactccgcatgtagcaggcgttgtcgcgctgctgaaagctctgcatccaagctggtcacctgctgcactaaaatcagccatagtcaccacaggtgaggccagcttctctggaaaaatgtttcacttcatctatgggcatttctgcatctgtctaacctatgctccatttgcatggtgaagcatctgtaactgatgagcgtggcatgcccatactggccgaagggttgcctcggaagattgctgacccatttgactatggaggcgggcacatcaaccctaacagagcagctgatcctggcctgatttacgacattgatccaagcgattacaacaaattctttggatgcactgtaaagccatatgtaaggtgcaatgcgacatcgttgcctgggtattatctgaacctaccgtccatctcagttcccgatcttaggtatccggtcgtcgtatcaagaacggtcacaaatgtagctgaggttgatgctgtttaccacgctgcaatcgagagcccacctggcgtaaagatggatgttgagccacctgttctggtgttcaatgctgcaaacaaagttcatacgttccaggtaaagctttcacctctatggaagctgcagggggactacacgtttgggagccttacttggcacaacggccagaagacagtgagaatcccgatagcagtcaggattacaattcaggatttctacgcagacattgcataa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0795100, RefSeq:Os01g0795100