Os01g0795200

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0795200| Description = Similar to Subtilase| Version = NM_001051044.1 GI:115440458 GeneID:4325626| Length = 3448 bp| Definition = Oryza sa...")
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Gene Name

Os01g0795200

Description

Similar to Subtilase

Version

NM_001051044.1 GI:115440458 GeneID:4325626

Length

3448 bp

Definition

Oryza sativa Japonica Group Os01g0795200, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35440624..35444071

Sequence Coding Region

35440632..35440721,35440811..35440902,35441031..35441128,35441412..35441567,35441694..35442079
,35442131..35442319,35442414..35442484,35442575..35442829,35442925..35443042
,35443183..35443354,35443442..35443983

Expression

GEO Profiles:Os01g0795200

Genome Context

<gbrowseImage1> name=NC_008394:35440624..35444071 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35440624..35444071 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttttcacttctcttctcgactgttttcatcttgcctcctatttagcttttgcctgatgttaataagagcacatggatctcgcagattgtacatcgcctaccttggtgagaagaaacatgatgatcctactcttgtgactggttcacaccatgacatgctcagcagtattattggaagtaaggaggaggccaaggcttccatcacctacagctacaagcatggcttttcaggctttgcagcaatgttaacagaagaccaagctgaggatctggcagaattacctgaagttatcagtattactccaaatcagaagcatgagctaatgaccaccagaagctgggatttcctcgggcttaaaaatgaaccacccagtgagtttctgcaaaggagcaactatggagaagacataattattgggataattgacactggtatttggcctgaatcaaaaagcttccatgaccacggatatgatgcaataccatcacgatggaagggcgtctgtcaactaggagaggcctgggggccctccaattgcagcaggaaaatcattggtgcacggtactacgcggctggccttgacaaagccaacttcaagaagaattacatgtctgcccgggacaacaatggccatggaacacacacagcatccacagcagcaggtgtggcagtagagggggttaacctccatggcctaggagctggggtagcacgtggtggtgcaccccgagcacggcttgcagtttataaggttgggtgggaggagggtggtgctggtggagtatacctcgctactgccgcagtactagcagctctagatgagaattcatttggggcactccatgcagtccagaatgggattactgttgtttatgccgggggaaatagaggccctcgacctcaagtcctttataacacagctccttgggtcattacagtcgcagcgagcaagattgatcgatctttcccaactgccatcaccctgggaaacaagcaaacattagtgggacaatcactctattacaagttaaagaacgatacagagagcagatttgaatcacttgtaaatggtggcaattgttcaagggaggcgttaaatggcacaagcatcaatggaaaagttgttctatgcattgaattaacttttggcccgataggaagaattttcaaagatgtctttgcaggcgttattcagggtggggcgtctggtcttatcttcgctttttataccacggatgttcttttgagcacagaagattgcaaggggatagcctgtgtttttgttgacaatgagattggatatcaagttgcaacatacataggcagtgaaagattacccactgttaagattgagccagcaagtagtattacaggaaatcaggtccccgctccaaaggtggcaatattctcctcaagaggcccatccatcaaataccctacagttcttaagcctgacatagcagctccaggagtcaacatcttagctgccaaagaagatgcatatgtatttaactcagggacatcaatggcagccccacatgtagcaggcgttgtggcattgcttaaggctctacatcctcattggtctcatgctgctctcaaatcagcaattgtcaccacagcatcaacaaaggacgaatatgacacgccgatattagcagaagcgcttcctcggaaagttgctgaccctttcgattatggaggagggaacataaatcctattggagctgctgatcctggcctaatttatgacatcgatccaaaggattacaacaaattcttcgcttgtcagatcaagaaatatgagatctgtaacattacgacattgccagcctatcacctgaatctgccttctatatctataccagacctaaggcatccaataaacgtacgacgagcagtcactaatgtcggggaggtggatgcggtttaccaatcctctatagaatccccccttggagtgaagatgactatcgaaccgcctgtcctagtcttcaatgctagcaagaaagtgcatgccttcaagatttgcattacacctctgtggaaagtgcagggaggctacacattcggcagcctaacttggtacaatgagcaccacactgcaagaatcccaattgctgtccggatcacaattcaagacttctacgctgatgttgcttag</cdnaseq>

Protein Sequence

<aaseq>MAFHFSSRLFSSCLLFSFCLMLIRAHGSRRLYIAYLGEKKHDDP TLVTGSHHDMLSSIIGSKEEAKASITYSYKHGFSGFAAMLTEDQAEDLAELPEVISIT PNQKHELMTTRSWDFLGLKNEPPSEFLQRSNYGEDIIIGIIDTGIWPESKSFHDHGYD AIPSRWKGVCQLGEAWGPSNCSRKIIGARYYAAGLDKANFKKNYMSARDNNGHGTHTA STAAGVAVEGVNLHGLGAGVARGGAPRARLAVYKVGWEEGGAGGVYLATAAVLAALDE NSFGALHAVQNGITVVYAGGNRGPRPQVLYNTAPWVITVAASKIDRSFPTAITLGNKQ TLVGQSLYYKLKNDTESRFESLVNGGNCSREALNGTSINGKVVLCIELTFGPIGRIFK DVFAGVIQGGASGLIFAFYTTDVLLSTEDCKGIACVFVDNEIGYQVATYIGSERLPTV KIEPASSITGNQVPAPKVAIFSSRGPSIKYPTVLKPDIAAPGVNILAAKEDAYVFNSG TSMAAPHVAGVVALLKALHPHWSHAALKSAIVTTASTKDEYDTPILAEALPRKVADPF DYGGGNINPIGAADPGLIYDIDPKDYNKFFACQIKKYEICNITTLPAYHLNLPSISIP DLRHPINVRRAVTNVGEVDAVYQSSIESPLGVKMTIEPPVLVFNASKKVHAFKICITP LWKVQGGYTFGSLTWYNEHHTARIPIAVRITIQDFYADVA</aaseq>

Gene Sequence

<dnaseqindica>9..98#188..279#408..505#789..944#1071..1456#1508..1696#1791..1861#1952..2206#2302..2419#2560..2731#2819..3360#atcacaacatggcttttcacttctcttctcgactgttttcatcttgcctcctatttagcttttgcctgatgttaataagagcacatggatctcgcagagtatggatgacacactgaactgcatttcatttcataaaactgatcctgttggaatgctaaaaatgttttatgtgactctctaaatgtagttgtacatcgcctaccttggtgagaagaaacatgatgatcctactcttgtgactggttcacaccatgacatgctcagcagtattattggaaggtaacctcagaatttcttcttttggctttcgagtttgtttctagagatttcttttctttgaaccacttgatttaacaatatcaaatatctctataattggttatgataatttactaattgaatttcagtaaggaggaggccaaggcttccatcacctacagctacaagcatggcttttcaggctttgcagcaatgttaacagaagaccaagctgaggatctggcaggtaggcggatttttaactgacctttatttgtaaatagttcatgttaaaagccttttgctatcagttaagatagatgactagaggattcagttccgatgtattcctagcattgaatggtaaaaagaaatggcatgttcactaatgtgcttatcaatttaccattgcaaactgctttcactatcagaaactgcctctgtaaagcaaatgcgttctcccccaaaaagaaatggcatgtttattaatgtgctttattttttgagatgcttttttttttcatgttcagaattacctgaagttatcagtattactccaaatcagaagcatgagctaatgaccaccagaagctgggatttcctcgggcttaaaaatgaaccacccagtgagtttctgcaaaggagcaactatggagaagacataattattgggataattgacactggtaagtccatcattttaatggaatcaattgtaaaaatcttgacctacagaattcttccaaaattcctcatgcatgaacatgtacatggatgtacattaagtaggacaacacatactattgatgcaggtatttggcctgaatcaaaaagcttccatgaccacggatatgatgcaataccatcacgatggaagggcgtctgtcaactaggagaggcctgggggccctccaattgcagcaggaaaatcattggtgcacggtactacgcggctggccttgacaaagccaacttcaagaagaattacatgtctgcccgggacaacaatggccatggaacacacacagcatccacagcagcaggtgtggcagtagagggggttaacctccatggcctaggagctggggtagcacgtggtggtgcaccccgagcacggcttgcagtttataaggttgggtgggaggagggtggtgctggtggagtatacctcgctactgccgcagtactagcagctctagatgatgctatccatgatggagtcgatatcctgtccctctcacttggtgttgatgagaattcatttggggcactccatgcagtccagaatgggattactgttgtttatgccgggggaaatagaggccctcgacctcaagtcctttataacacagctccttgggtcattacagtcgcagcgagcaagattgatcgatctttcccaactgccatcaccctgggaaacaagcaaacattagtggtacatgagactcgtgatctctgttagaacctttgctccatgcaatcttcctcaagaatttaccactcaaaagtacatgcttttatatttgcagggacaatcactctattacaagttaaagaacgatacagagagcagatttgaatcacttgtaaatggtggcaagtatgtataaagttaatgccagtttctgattaacatcatttacataccaacttatgtttaggtgttgaagctttttgcctgtgtctacagttgttcaagggaggcgttaaatggcacaagcatcaatggaaaagttgttctatgcattgaattaacttttggcccgataggaagaattttcaaagatgtctttgcaggcgttattcagggtggggcgtctggtcttatcttcgctttttataccacggatgttcttttgagcacagaagattgcaaggggatagcctgtgtttttgttgacaatgagattggatatcaagttgcaacatacataggcagtgaaaggtatggataaatatttaacgacccaccaagctctagctgtattttctctgtaactatttaaactcccaaataattttgctttattttttatccagattacccactgttaagattgagccagcaagtagtattacaggaaatcaggtccccgctccaaaggtggcaatattctcctcaagaggcccatccatcaaataccctacagttcttaaggtacaatctgaaaggaagtacatactgttggtctttattttagttaggaaaatctttatacagacatcagataccgtgcaccttaagatgattttattccacaggagcatttcctaaccatattatatctgctttaacagcctgacatagcagctccaggagtcaacatcttagctgccaaagaagatgcatatgtatttaactcagggacatcaatggcagccccacatgtagcaggcgttgtggcattgcttaaggctctacatcctcattggtctcatgctgctctcaaatcagcaattgtcaccacaggtaaattacttgagtgtgctatccacatgaaacaactatataggtaaatccactcaaccatgaattactcttttttgcatgcaaaagcatcaacaaaggacgaatatgacacgccgatattagcagaagcgcttcctcggaaagttgctgaccctttcgattatggaggagggaacataaatcctattggagctgctgatcctggcctaatttatgacatcgatccaaaggattacaacaaattcttcgcttgtcagatcaagaaatatgagatctgtaacattacgacattgccagcctatcacctgaatctgccttctatatctataccagacctaaggcatccaataaacgtacgacgagcagtcactaatgtcggggaggtggatgcggtttaccaatcctctatagaatccccccttggagtgaagatgactatcgaaccgcctgtcctagtcttcaatgctagcaagaaagtgcatgccttcaagatttgcattacacctctgtggaaagtgcagggaggctacacattcggcagcctaacttggtacaatgagcaccacactgcaagaatcccaattgctgtccggatcacaattcaagacttctacgctgatgttgcttagtaatgaacatatttctagacaatgtatactcagtaataaacatgtaaaccaatagcgcttgcaataagaacaatttgcttcattgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0795200, RefSeq:Os01g0795200

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