Os01g0798500

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0798500| Description = Malate synthase-like family protein| Version = NM_001051059.1 GI:115440488 GeneID:4327627| Length = 2225 bp| Defini...")
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Gene Name

Os01g0798500

Description

Malate synthase-like family protein

Version

NM_001051059.1 GI:115440488 GeneID:4327627

Length

2225 bp

Definition

Oryza sativa Japonica Group Os01g0798500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35559008..35561232

Sequence Coding Region

35559038..35559412,35559514..35559558,35559657..35559770,35560267..35560347,35560626..35560799
,35560941..35561030

Expression

GEO Profiles:Os01g0798500

Genome Context

<gbrowseImage1> name=NC_008394:35559008..35561232 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35559008..35561232 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgctctcaccaccctccccgcctcctccgctcccgccacttcgccgccgccccgcctctcccacactcctcgccgtcgcgacgagacctagctctctcctctccctgccccactgccactgcggcctccccctcccttctacagccaacgcacgggcgtattcccgtagcagccgccgccgccgccgcgtagctgcctcgctcggccaggacgaacctggagtgtcagacacagctgtcgctcctgagggagaaggggattccgaaccgccggcttcctccgatggagccgcaggcgacatcgcggcttccgccgagcagccggaggcgagccccgaggacttggaggatatccgccaggtcaaaagggtgcttgagcttcttcagaagaacagggatatgacctttggcgaggttaagctaactatcatgattgaggatcctagagatatagaaaggaagagattactcggcatagaggatcctgatgaaatcaccagggatgatttggctgatgctttggttgaggttaatgaaggccggattccagaaaaccgtgttgcccttcagttgcttgcgaaggagatgactgaatggccagatcttgagatggaagctccaaaaaagaagagtaaacctgggaaatctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagacttaacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaactgaagtgccctccgcagtgggatattctgctctatatctgttaactgcctttcctgtcattattggaatatcagtcgtgttgattcttttctacaattctctacagtag</cdnaseq>

Protein Sequence

<aaseq>MALLSPPSPPPPLPPLRRRPASPTLLAVATRPSSLLSLPHCHCG LPLPSTANARAYSRSSRRRRRVAASLGQDEPGVSDTAVAPEGEGDSEPPASSDGAAGD IAASAEQPEASPEDLEDIRQVKRVLELLQKNRDMTFGEVKLTIMIEDPRDIERKRLLG IEDPDEITRDDLADALVEVNEGRIPENRVALQLLAKEMTEWPDLEMEAPKKKSKPGKS VYAKATDTGIDPETAAKRLNIDWDSAADLDDEEEEDDETEVPSAVGYSALYLLTAFPV IIGISVVLILFYNSLQ</aaseq>

Gene Sequence

<dnaseqindica>31..405#507..551#650..763#1260..1340#1619..1792#1934..2023#ccggacccaacaagataggggggagccaaaatggcgctgctctcaccaccctccccgcctcctccgctcccgccacttcgccgccgccccgcctctcccacactcctcgccgtcgcgacgagacctagctctctcctctccctgccccactgccactgcggcctccccctcccttctacagccaacgcacgggcgtattcccgtagcagccgccgccgccgccgcgtagctgcctcgctcggccaggacgaacctggagtgtcagacacagctgtcgctcctgagggagaaggggattccgaaccgccggcttcctccgatggagccgcaggcgacatcgcggcttccgccgagcagccggaggcgagccccgaggacttggaggatatccgccaggtcaaaagggtacgcgccttctagttacggcccctttcgcttggtttatgtttttgggatgagttcgtgcttacttggtgtttggttcggcacttcggctgcggttgcaggtgcttgagcttcttcagaagaacagggatatgacctttggcgaggtaagcagtctttggacagtcaagataatcctggtcgagttattgccgatgcccgatgataacttactatggtgttctgcttcgttgctgcatcacaggttaagctaactatcatgattgaggatcctagagatatagaaaggaagagattactcggcatagaggatcctgatgaaatcaccagggatgatttggctgatgctttggttgaggtacactatcaatgaacgtgaatcttctgtcactttcattttgtgaatatcgttcttggtaactactagcatcttcattcacttgaggagccgacatacattttagtgtatactaaccagtcacatgctatgctctagtatttgaaataaccagtaaaaaacactgcctctgtactgtagcactattgttgacatttgaatgataaaggaaatctgaaagatttgttgtgcctttgctggtgtcacgcaagaactgctgcctccctgttgtgaattacttgtttttagaacctataattatcaaacagtcgtttaaaatttattcattctaacttttttttttccaaatgaatttgcctggattccattactcatgtaacaaaataaagtgaagtgagtacctttttacatgatcttcataccatccttcttcattccatacttagtttggccccaacatattgcttcagcggtcagttaataatatgccttgcaggttaatgaaggccggattccagaaaaccgtgttgcccttcagttgcttgcgaaggagatgactgaatggccagatcttgaggtaatactgacaattcagtttatcgacttcttagaaatgcatataagttttctccagctaccataccaccataacaatagttttgcctaccagcgtcttcaaactgcttgactcatactgattatttgtatggttttgtcagccttcatcactttcaaaagtacaagtgtaccactgagcattgctcgtcactttcctatgcatatgttttcattgtctttttgtaacaacctgtttagtcaaactgtgtttaaattcatttttaattttttgtacagatggaagctccaaaaaagaagagtaaacctgggaaatctgtctatgcaaaggctacagatacaggcattgatcctgagacagctgctaaaagacttaacattgattgggattctgctgctgatttggatgatgaagaggaggaagatgatgaaactgaagtgccctccgcagtggtaagatgttgattttgacatatgccaacaatattggttttaggtgcaaacatttgatcaaaattgaacagatctcttgtacctttttttttttgccatatccttttaacaacacacctttttttaattatttttttgcagggatattctgctctatatctgttaactgcctttcctgtcattattggaatatcagtcgtgttgattcttttctacaattctctacagtagttcagccctgctcatctttgcttcccgaggcagatatcctcctccttttattttcttttgtaaatctgagtcagcttaatcttcattattgtgaagaaatgaagatgtgaaatagtttctgtggtgatatgacaactgacaagatagtaaatccgtgaaatgcatattaccaaaatagaaggcttgaaaatagttttttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0798500, RefSeq:Os01g0798500