Os01g0798800

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0798800| Description = Protein of unknown function DUF594 family protein| Version = NM_001051060.1 GI:115440490 GeneID:4327628| Length = 22...")
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Gene Name

Os01g0798800

Description

Protein of unknown function DUF594 family protein

Version

NM_001051060.1 GI:115440490 GeneID:4327628

Length

2213 bp

Definition

Oryza sativa Japonica Group Os01g0798800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35568761..35570973

Sequence Coding Region

35568778..35570463,35570551..35570931

Expression

GEO Profiles:Os01g0798800

Genome Context

<gbrowseImage1> name=NC_008394:35568761..35570973 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35568761..35570973 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggaaccatggcaggcatggtggccttgtggaacgagtgggaaatccgcgtgcttgtgctctccagcctcgcgctgcaggtgttcctcctcttctccgccgtcatccgcaagcgcaacgtctccgccgtgctcggcctgctcctctggctcgcctacctgctcgcggactccatcgccatctacgcgctcggctacctctcccagacgcgcgtccccagaggcgtcgacgtgcggtccttccgcaacacccaccgcatccaagccttctgggcgccgttcctcctcctccacctcggcggccaggacaccatcacggccttctccatcgaggacaacgagctctggaagcgccacctgctcagcttgctctcccaggttgccctcgctatgtacgtcttcgcgaagtcgcgcccaggcgccgatatccttgcccccgccgtgttcatgttcttgagtggtattctcaagtacggcgagaggacatgggcgctgaagtgcgcgagcatggacaacctgcggagcggcatggtgacgacgcctgacccgggtcccaactacgccaagttcatggaggagtaccgcttcacgcgcgaggcgggactccaggcggagatcgtcattgagccggagcgacggggcggctgggtcaccgccgcggccatcgccgaggagagcgtgccgtacacgacgatcatcaccgacgcgcgccgcttcttcgtcaccttcaagcgcctcttcgtcaacctcatcctcagcttccaggaccgaacgcggagccaggccacgttcctgcggctcacgccggagcaagcgtacaagatcatcgagatcgagctgtcgctcatgtacgacaccctgcactccaaggcggcggtcatccacacttggtacggccgcctgttccgctgtgtcacgctcctctcgacgtcggcggcgtgcctcctcttcaatctgcttgacaaggatcggtacgagtcgcacgacacccgcgtcgacatcttcatcaccaacctgttgttcggtggagcactctgcttggaggtttacgccattggtatgatgctcatatcctactggacgtacgccgctctgcaaggttgcaactgccgcacgctgagccatcttctgttcaaaagcatcaagtatttccggccggaaagccggccgaagtggtccaatctgatggcccaacacaaccttatcagctattgcctccatgacagagcaacgttgctcaccaaggtcatcaccatggtcgggctcaaaggacattgggatagttggatgcacatccagcacatagacgtgttacccgagctgaaaaccttggtgttcagggagctcaaggacaaggcggtcagcatcgtcgacaatgccgagagctaccgcaagttcagcaaccacaggggccagtgggcgctgcagtgcaagggctactacaaggagcttggctggagcgtcgaggtagagttcgacgagagcattctcctctggcacatcgccacggacctctgcttctactacgacatcgacggcagtgacggcgacgccaagctcaccgagtacgttggcatcagcagagcggtgtcaaactacatgcttttcctgctcgtcgcgcggccgttcatgctgacggccggcatcgggcagatccggttcggcgacacctgcgcggaggccaagatcttcttcgagcgggaaatggcgctgccggacgagcgagcggcggcggcgatggtgctcgaggtgaacgcggagatcgcgccgagggacgtgaagggagacaggagcaagtcggtcctgttcgacgcgtgccggctagccaagtcgctgctggagctgcagcccggcaagaggtggcggctgatccgcgtggtgtgggtggagatcctctgctacgccgcgagcaagtgccggagcaacttccatgccaagcagctgagcaacggcggcgagctgctcactgtcgtctggttcttgatggcgcatctggggatgggggagcagtacaggatagaggctgggcatgcaagagctaaactaattgtagagaagaactga</cdnaseq>

Protein Sequence

<aaseq>MEGTMAGMVALWNEWEIRVLVLSSLALQVFLLFSAVIRKRNVSA VLGLLLWLAYLLADSIAIYALGYLSQTRVPRGVDVRSFRNTHRIQAFWAPFLLLHLGG QDTITAFSIEDNELWKRHLLSLLSQVALAMYVFAKSRPGADILAPAVFMFLSGILKYG ERTWALKCASMDNLRSGMVTTPDPGPNYAKFMEEYRFTREAGLQAEIVIEPERRGGWV TAAAIAEESVPYTTIITDARRFFVTFKRLFVNLILSFQDRTRSQATFLRLTPEQAYKI IEIELSLMYDTLHSKAAVIHTWYGRLFRCVTLLSTSAACLLFNLLDKDRYESHDTRVD IFITNLLFGGALCLEVYAIGMMLISYWTYAALQGCNCRTLSHLLFKSIKYFRPESRPK WSNLMAQHNLISYCLHDRATLLTKVITMVGLKGHWDSWMHIQHIDVLPELKTLVFREL KDKAVSIVDNAESYRKFSNHRGQWALQCKGYYKELGWSVEVEFDESILLWHIATDLCF YYDIDGSDGDAKLTEYVGISRAVSNYMLFLLVARPFMLTAGIGQIRFGDTCAEAKIFF EREMALPDERAAAAMVLEVNAEIAPRDVKGDRSKSVLFDACRLAKSLLELQPGKRWRL IRVVWVEILCYAASKCRSNFHAKQLSNGGELLTVVWFLMAHLGMGEQYRIEAGHARAK LIVEKN</aaseq>

Gene Sequence

<dnaseqindica>511..2196#43..423#aacgctggaatcgtgctacaggcggcagagtggaaggcggagatggagggaaccatggcaggcatggtggccttgtggaacgagtgggaaatccgcgtgcttgtgctctccagcctcgcgctgcaggtgttcctcctcttctccgccgtcatccgcaagcgcaacgtctccgccgtgctcggcctgctcctctggctcgcctacctgctcgcggactccatcgccatctacgcgctcggctacctctcccagacgcgcgtccccagaggcgtcgacgtgcggtccttccgcaacacccaccgcatccaagccttctgggcgccgttcctcctcctccacctcggcggccaggacaccatcacggccttctccatcgaggacaacgagctctggaagcgccacctgctcagcttgctctcccaggtacgagcttgaaccacgtgcattctgctctgctgattaaccatgccgtctctcacgttttcaatgaacacctcgtgtgcaaaacaggttgccctcgctatgtacgtcttcgcgaagtcgcgcccaggcgccgatatccttgcccccgccgtgttcatgttcttgagtggtattctcaagtacggcgagaggacatgggcgctgaagtgcgcgagcatggacaacctgcggagcggcatggtgacgacgcctgacccgggtcccaactacgccaagttcatggaggagtaccgcttcacgcgcgaggcgggactccaggcggagatcgtcattgagccggagcgacggggcggctgggtcaccgccgcggccatcgccgaggagagcgtgccgtacacgacgatcatcaccgacgcgcgccgcttcttcgtcaccttcaagcgcctcttcgtcaacctcatcctcagcttccaggaccgaacgcggagccaggccacgttcctgcggctcacgccggagcaagcgtacaagatcatcgagatcgagctgtcgctcatgtacgacaccctgcactccaaggcggcggtcatccacacttggtacggccgcctgttccgctgtgtcacgctcctctcgacgtcggcggcgtgcctcctcttcaatctgcttgacaaggatcggtacgagtcgcacgacacccgcgtcgacatcttcatcaccaacctgttgttcggtggagcactctgcttggaggtttacgccattggtatgatgctcatatcctactggacgtacgccgctctgcaaggttgcaactgccgcacgctgagccatcttctgttcaaaagcatcaagtatttccggccggaaagccggccgaagtggtccaatctgatggcccaacacaaccttatcagctattgcctccatgacagagcaacgttgctcaccaaggtcatcaccatggtcgggctcaaaggacattgggatagttggatgcacatccagcacatagacgtgttacccgagctgaaaaccttggtgttcagggagctcaaggacaaggcggtcagcatcgtcgacaatgccgagagctaccgcaagttcagcaaccacaggggccagtgggcgctgcagtgcaagggctactacaaggagcttggctggagcgtcgaggtagagttcgacgagagcattctcctctggcacatcgccacggacctctgcttctactacgacatcgacggcagtgacggcgacgccaagctcaccgagtacgttggcatcagcagagcggtgtcaaactacatgcttttcctgctcgtcgcgcggccgttcatgctgacggccggcatcgggcagatccggttcggcgacacctgcgcggaggccaagatcttcttcgagcgggaaatggcgctgccggacgagcgagcggcggcggcgatggtgctcgaggtgaacgcggagatcgcgccgagggacgtgaagggagacaggagcaagtcggtcctgttcgacgcgtgccggctagccaagtcgctgctggagctgcagcccggcaagaggtggcggctgatccgcgtggtgtgggtggagatcctctgctacgccgcgagcaagtgccggagcaacttccatgccaagcagctgagcaacggcggcgagctgctcactgtcgtctggttcttgatggcgcatctggggatgggggagcagtacaggatagaggctgggcatgcaagagctaaactaattgtagagaagaactgagataatcacctttcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0798800, RefSeq:Os01g0798800