Os01g0799500

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0799500| Description = DNA glycosylase family protein| Version = NM_001051063.1 GI:115440496 GeneID:4327631| Length = 3015 bp| Definition ...")
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Gene Name

Os01g0799500

Description

DNA glycosylase family protein

Version

NM_001051063.1 GI:115440496 GeneID:4327631

Length

3015 bp

Definition

Oryza sativa Japonica Group Os01g0799500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35593234..35596248

Sequence Coding Region

35593339..35593975,35594058..35594115,35594208..35594291,35594407..35594542,35595779..35596039

Expression

GEO Profiles:Os01g0799500

Genome Context

<gbrowseImage1> name=NC_008394:35593234..35596248 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35593234..35596248 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcaactccaacgtgaagtccgccggcgtcgctcagatcgacggccgcccggtgctgcagccggcggggaaccgcgtggcggcgcctgaagctgcccggccgctcaagaagtccctgcagaagtcgctctccatgccggcttcgctcgacaatgctgcggccgcgaccacctgcgcggcgtcccccgagaagtcccgcgccgccgacttcgcccgcgctgcggcggcgtctcttctcccaccacctactccagcttcggtcagtgctaaggcgacgagggtgtctggagccaaggtggctgccgccaggactgcggcggcggctgcggccatggggggcttggacaggagcaggaagcccgccaagaagggcggcgccgccgtgctgccggtggtgacgttcgcggggctcgaggcgtacgagcccgccgggagcatcgcggcggcgcagcgggagcacgtcgcgatggcgcaggcgcagcgcaagatgcggatcgcgcactacggccgcaccgcgtccttctcccgagtcgaagggaaagtcagcgctaccgcgacgggtgccgccgagctcgtcgccggtgccgtcaccgggcatgacgagaagcgatgcagcttcatcactccatattcagaccccctgtacgtcgcctaccacgacgaggagtggggtgtgcccgtgcgcgacgacgagttgctgttcgagatgctcacgttgtccggcgtgcaagtcggggcggactggacctcgatcctgaagaggagacacgtctacagggaggcattctccggtttcaacgtggacgctgtcgccaagtacacggagaagcagatggcatcgctaagcgccgagttcggcctggatttgggcaccatcagaggcgccgtcaacaacgcctgccggatttccgaggtgaggagggacttcgggtcgttcagcaaatacgtgtgggcgttcgtaaacaacaagccgctgtcgccgagctacaaatacagccggaagatcccggtgaagacgtccaagtcggagtcgatcagcaaggacatggtgcggcgcggcttccggttcgtcggccccaccgtcatccactcgttcatgcaggccgtcgggctcaccaacgaccacctcgtgtcatgcccgcgccaccgcgtctgctcctcctcctccgcttaa</cdnaseq>

Protein Sequence

<aaseq>MCNSNVKSAGVAQIDGRPVLQPAGNRVAAPEAARPLKKSLQKSL SMPASLDNAAAATTCAASPEKSRAADFARAAAASLLPPPTPASVSAKATRVSGAKVAA ARTAAAAAAMGGLDRSRKPAKKGGAAVLPVVTFAGLEAYEPAGSIAAAQREHVAMAQA QRKMRIAHYGRTASFSRVEGKVSATATGAAELVAGAVTGHDEKRCSFITPYSDPLYVA YHDEEWGVPVRDDELLFEMLTLSGVQVGADWTSILKRRHVYREAFSGFNVDAVAKYTE KQMASLSAEFGLDLGTIRGAVNNACRISEVRRDFGSFSKYVWAFVNNKPLSPSYKYSR KIPVKTSKSESISKDMVRRGFRFVGPTVIHSFMQAVGLTNDHLVSCPRHRVCSSSSA</aaseq>

Gene Sequence

<dnaseqindica>106..742#825..882#975..1058#1174..1309#2546..2806#ccaactcacatctcatctcttcgctgctgctactcgaagcgcacatattcccggagttaaatcatcggtacaccgtctcagagcatttttctcctcacggacaagatgtgcaactccaacgtgaagtccgccggcgtcgctcagatcgacggccgcccggtgctgcagccggcggggaaccgcgtggcggcgcctgaagctgcccggccgctcaagaagtccctgcagaagtcgctctccatgccggcttcgctcgacaatgctgcggccgcgaccacctgcgcggcgtcccccgagaagtcccgcgccgccgacttcgcccgcgctgcggcggcgtctcttctcccaccacctactccagcttcggtcagtgctaaggcgacgagggtgtctggagccaaggtggctgccgccaggactgcggcggcggctgcggccatggggggcttggacaggagcaggaagcccgccaagaagggcggcgccgccgtgctgccggtggtgacgttcgcggggctcgaggcgtacgagcccgccgggagcatcgcggcggcgcagcgggagcacgtcgcgatggcgcaggcgcagcgcaagatgcggatcgcgcactacggccgcaccgcgtccttctcccgagtcgaagggaaagtcagcgctaccgcgacgggtgccgccgagctcgtcgccggtgccgtcaccgggcatgacgagaagcgatgcagcttcatcactccatattcaggtgcgcacacacgacaccacacaaaacaatttacactactgcgaaattaactcttaactaatacgcaatcgttcatgcgcagaccccctgtacgtcgcctaccacgacgaggagtggggtgtgcccgtgcgcgacgacgagtgagtttgcccttcttttttttgcgaataatacaagcatccgattgctttgcaacagttctcctcacatttcgtgccaactgaaacgacaggttgctgttcgagatgctcacgttgtccggcgtgcaagtcggggcggactggacctcgatcctgaagaggagacacgtctacaggttcgaaaacagagcaacccaatccatactctgctgctaaagatgaagccatccgtgtgataccagtagtatattggtgctgattttgcgttgctgcttgcttgatcacaaatagggaggcattctccggtttcaacgtggacgctgtcgccaagtacacggagaagcagatggcatcgctaagcgccgagttcggcctggatttgggcaccatcagaggcgccgtcaacaacgcctgccggatttccgaggtactgtcacctgcatctgcatgccaagctactagtactatcaattaagcccatgatctttctgaacttgtcctcaagcaagaacgtttccattcctagtaatcaggacatttgacaattctaacaagctcgtcgtcctattcactgacgtgcgatgtcccaaaactgtatttttctttagatagttcacatagagcccatactcctcagcttatttttttgcatttccatactagtgtttaatttccggttgatgaatagaccggatgagacagtaccacaacttgacaaccgaaactttaccaaaaagaaaaagggaggtcaatgaatgaatgcttgggaaagaaaggtcagttaagtgaaagcgaagcctaacagaatccctgacagcttacgccccctcatggtagacagctcaatcagcagctgcagggccctttaaatgccactagtaatttgcagaatcaaagcaaagtgcgtggtaaagtacaacaaaaaagagcgaacacttcctagctaattggcatttgacacccaagagctagcctgaaaggcagaaagaagctactccctccggttggtttcatattaattaacgttttagacaatgttgatgtcaaacttttacttttataactttcaccatcaataactttaaaaatatttagtttaaaggaactataataacatatatagatttgtcttttaaagcactataataaaagtaaatatgcatttatttattatatatattatagtaaaaaaataagatcaaagatatattttatagaccgtgttattgtacaaaacgtcaattaaaataaaaccggaaagagtactagtacttgctgtcaatcttttggctgaagccttgcttcgcgccatcacgaaggagacacggctaattaactgtgcgcaactgttctctttcgtgtttagttggcaaagggtttctgcacacgatgcatcgctcttgcacagctagcgatccaatattcggagtgcaatcaactatacctagtttaagtacgcttagtacgtagctgacgccaactaatctatcagtaagtacactgaccagggattatcttattttcgtgaggttaattaggtacgtatatacctagtacctactcaaattctacgtacaagcagtagttgttatatataagtgtatatgcagtggaagaatggagggagaatctaatggtgtacttgatatattcgatgaaacaggtgaggagggacttcgggtcgttcagcaaatacgtgtgggcgttcgtaaacaacaagccgctgtcgccgagctacaaatacagccggaagatcccggtgaagacgtccaagtcggagtcgatcagcaaggacatggtgcggcgcggcttccggttcgtcggccccaccgtcatccactcgttcatgcaggccgtcgggctcaccaacgaccacctcgtgtcatgcccgcgccaccgcgtctgctcctcctcctccgcttaaccgatctgaccatcgccaaaacagttaccggccagctccccgaaggaagcaaggagaaaaaacaagaaggaaagagaaaaagtgagagatgagatagcctcaagtagtagtatacagaacgggtattgatttgcgagtgtgtgtatgtgtgtgcttgtgtagattattgtccctaactaggcaagaagcttgattgtcaattacgtacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0799500, RefSeq:Os01g0799500