Os01g0801500

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0801500| Description = Beta-1,3-glucanase precursor| Version = NM_001051075.1 GI:115440520 GeneID:4327963| Length = 2245 bp| Definition = ...")
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Gene Name

Os01g0801500

Description

Beta-1,3-glucanase precursor

Version

NM_001051075.1 GI:115440520 GeneID:4327963

Length

2245 bp

Definition

Oryza sativa Japonica Group Os01g0801500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35705233..35707477

Sequence Coding Region

35705429..35706378,35707336..35707399

Expression

GEO Profiles:Os01g0801500

Genome Context

<gbrowseImage1> name=NC_008394:35705233..35707477 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35705233..35707477 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgctgtgttggttaccgccgccatcttcgggttgctgctctgcggctgctcggtttcaggagtggaaggtatcggtgtgaactatggcatgatcggcaacaacctcccgtcgccggacaaggtcatcgccctgtacagagccagcaacatcaccgacatccgcctcttccacccggacaccaccgtgctcgccgcgctccgcggctcgggcctcggcgtcgtgctcggcacgctcaacgaggacctggcacgcctcgccaccgacgcctcgttcgcggcgtcgtgggtccagtcgtacgtgcagcccttcgccggcgccgtccgcttccgctacatcaacgccggcaacgaggtcatccctggggacgaggcggcgagcgtcctcccggccatgaggaacctccagtcggcgctgcgcgccgcggggctcggcgtgccggtcacgacggtcgtcgcgacgtcggtgctgggctcctcgtacccgccgtcgcagggcgcgttctccgaggccgcgctgccgacggtggcgccgatcgtctccttcctggcgtcgagcgggacgcccctgctggtgaacgtgtacccgtacttcgcctactccgccgacccgtcgtcggtgcggctcgactacgcgctgctgtcgccgtcgacgtcggcggccgtgacggacggcggtgtcacgtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcgggcgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggccggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcgcggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacgagaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgcggtctaccacgtcgacttctcggcgtga</cdnaseq>

Protein Sequence

<aaseq>MDAVLVTAAIFGLLLCGCSVSGVEGIGVNYGMIGNNLPSPDKVI ALYRASNITDIRLFHPDTTVLAALRGSGLGVVLGTLNEDLARLATDASFAASWVQSYV QPFAGAVRFRYINAGNEVIPGDEAASVLPAMRNLQSALRAAGLGVPVTTVVATSVLGS SYPPSQGAFSEAALPTVAPIVSFLASSGTPLLVNVYPYFAYSADPSSVRLDYALLSPS TSAAVTDGGVTYTNMFDAILDAVYAALEKAGGQGLEVVVSETGWPSGGGGAGASVENA AAYSNNLVRHVGRGTPRRPGKAVETYIFAMFNENQKPEGVEQNFGLFHPDMSAVYHVD FSA</aaseq>

Gene Sequence

<dnaseqindica>1100..2049#79..142#agaggagtcggaaaggagatacagttctcagatagtttctgctacctttgctgccgcgcgctgcagaagatcggcgagatggatgctgtgttggttaccgccgccatcttcgggttgctgctctgcggctgctcggtttcaggtgagtgaacgcatcggttgatctacttctctggtgatcagttagtagtagctagattggttgttagtagtagctactagattggtgttctctcttgtgtttatcagtactccccttgctgcgccgttaatcagtttcgagtatatttgcgatgcgtgaaaacttctctgaaacgcggttgatttcgatcgatcttagtgggaatgcttcttggaaattgttcttgtcattatccggttcctctctgttttgttcattgtgttattggttaggatctgccataatcttctctaaaagcggtatccttggaatatctttgcatgcattcacgggtgcaccgttggatcaagcagagatatttagatgtggtgtttctttaccggatgttttgttatacctattatgagtaaattggttcccggctcggaataaatcccagtctctcattactctatcataaatttgttactatactcctcattcccggtccggattgaatccgcgcgtaaccgaacaaggccttactggggatacaatggaaatatcttggcatctttgtttctctgtcaattcaaaccaccgtcttcaattcgtttcaaatcttttgaagtgtggtcgatctctcatggtcaagtagaaccgacgggacctaatgtttggttgtagtacaatgcactccttaattatggatggtaacttttgatccacaagaactgtttctagcttgccctttccaatttcaaaatgagtgttcctttcatgaaaagggtaatgtaatcatatgcgcatatatgcacctttgcagcgatagttagtaagaaatctttcatcaaaatgccgttaattaactagtgaatctgtggaaagatgaaatggtaatgtagtagtacaagctaggttgagtagtttctttgcttgtttaccagtacgtgtatggcgtgtgtattgatcgtgcaggagtggaaggtatcggtgtgaactatggcatgatcggcaacaacctcccgtcgccggacaaggtcatcgccctgtacagagccagcaacatcaccgacatccgcctcttccacccggacaccaccgtgctcgccgcgctccgcggctcgggcctcggcgtcgtgctcggcacgctcaacgaggacctggcacgcctcgccaccgacgcctcgttcgcggcgtcgtgggtccagtcgtacgtgcagcccttcgccggcgccgtccgcttccgctacatcaacgccggcaacgaggtcatccctggggacgaggcggcgagcgtcctcccggccatgaggaacctccagtcggcgctgcgcgccgcggggctcggcgtgccggtcacgacggtcgtcgcgacgtcggtgctgggctcctcgtacccgccgtcgcagggcgcgttctccgaggccgcgctgccgacggtggcgccgatcgtctccttcctggcgtcgagcgggacgcccctgctggtgaacgtgtacccgtacttcgcctactccgccgacccgtcgtcggtgcggctcgactacgcgctgctgtcgccgtcgacgtcggcggccgtgacggacggcggtgtcacgtacaccaacatgttcgacgccatcctggacgcggtgtacgcggcgctggagaaggcgggcgggcagggcctggaggtggtggtgtcggagaccgggtggccgtcgggcggcggcggggccggcgccagcgtggagaacgcggcggcgtacagcaacaacctggtgcgccacgtcgggcgcggcacgccgcggcggcccgggaaggccgtggagacgtacatcttcgccatgttcaacgagaaccagaagcccgagggcgtggagcagaacttcggcctgttccacccggacatgagcgcggtctaccacgtcgacttctcggcgtgatcatcttaatcaggcagcgacggcgggggcgacgctccatggatttggactcatcgtgtgcatgagttacttaagtaccaattttaggaagttagtagtatgattacaatattggacaaagatatttgacatcgatatgtatatgattccgctgcatttctgattaattaccagcattcacctgtttctctgattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0801500, RefSeq:Os01g0801500