Os01g0801700

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0801700| Description = Conserved hypothetical protein| Version = NM_001051077.1 GI:115440524 GeneID:4327965| Length = 3349 bp| Definition ...")
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Gene Name

Os01g0801700

Description

Conserved hypothetical protein

Version

NM_001051077.1 GI:115440524 GeneID:4327965

Length

3349 bp

Definition

Oryza sativa Japonica Group Os01g0801700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35712600..35715948

Sequence Coding Region

35713065..35713292,35713710..35713899,35715302..35715921

Expression

GEO Profiles:Os01g0801700

Genome Context

<gbrowseImage1> name=NC_008394:35712600..35715948 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35712600..35715948 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgccctccgcaaaaccctcctccacggccgcctccccgccgcgccgccggccgccgccgccgccgccatcgcgtctaggatccccgccctcctccgtcgcctctcctcttctcccggagacgggcagggcggggacgaatggggctcgtcctggtccaccggcatcaccaaggaacacttcgacggctccgacgccgcggtcggccgcccggtcacctccccgtccaagccggtctcccctgagcttgcggccgtccgggccatggacgaggaggacgagatcttccgcgccatggagcgcgacaacagggaggccaaggcgtacgtggactcgtggggcgaccggatgcgggagacgtgcgagctgctgaagcaggtgcgcgagccgggctcccggggatcctacctcaaggactcggagaagcaggagatgtaccggctgcacaaggaggaccccgagacgtacaccgtggagcgcctcgccaaggacttccgcgtcatgcggcagcgggtgcacgccatcctgtggctcaaggagatggaggaagaggaggagaggaagctgggcaagccgctcgacgactccgtcgaggtcctcctcgacagttgcccagagtttttcaattcccatgatagggaatttcatgttgcatcacttccttataaacctgacttcaaagttatgcctgagggctgggatggcacaaccagagatcctgatgaggttctgtatgagatttcaatgaaggaagatcagatgctgtatgaggaatttgttcaacggttacagttcaacaagaagaaggtggcaggcgaggtgaagtgtcataagtacagccgacgacggcccgacgatggatggacctacatggttgagaaacttggagcgcagtcaaagcggggctctggaggtggctggaagttcgccagtttacctgatggatcaagccgcccactaaacgatatggagaagatgtatgtgaagagggagactccaaaacggcggaggaggataatggcacccttcaagtaa</cdnaseq>

Protein Sequence

<aaseq>MLALRKTLLHGRLPAAPPAAAAAAIASRIPALLRRLSSSPGDGQ GGDEWGSSWSTGITKEHFDGSDAAVGRPVTSPSKPVSPELAAVRAMDEEDEIFRAMER DNREAKAYVDSWGDRMRETCELLKQVREPGSRGSYLKDSEKQEMYRLHKEDPETYTVE RLAKDFRVMRQRVHAILWLKEMEEEEERKLGKPLDDSVEVLLDSCPEFFNSHDREFHV ASLPYKPDFKVMPEGWDGTTRDPDEVLYEISMKEDQMLYEEFVQRLQFNKKKVAGEVK CHKYSRRRPDDGWTYMVEKLGAQSKRGSGGGWKFASLPDGSSRPLNDMEKMYVKRETP KRRRRIMAPFK</aaseq>

Gene Sequence

<dnaseqindica>2657..2884#2050..2239#28..647#agtcagaagcacacggagccaagcaaaatgctcgccctccgcaaaaccctcctccacggccgcctccccgccgcgccgccggccgccgccgccgccgccatcgcgtctaggatccccgccctcctccgtcgcctctcctcttctcccggagacgggcagggcggggacgaatggggctcgtcctggtccaccggcatcaccaaggaacacttcgacggctccgacgccgcggtcggccgcccggtcacctccccgtccaagccggtctcccctgagcttgcggccgtccgggccatggacgaggaggacgagatcttccgcgccatggagcgcgacaacagggaggccaaggcgtacgtggactcgtggggcgaccggatgcgggagacgtgcgagctgctgaagcaggtgcgcgagccgggctcccggggatcctacctcaaggactcggagaagcaggagatgtaccggctgcacaaggaggaccccgagacgtacaccgtggagcgcctcgccaaggacttccgcgtcatgcggcagcgggtgcacgccatcctgtggctcaaggagatggaggaagaggaggagaggaagctgggcaagccgctcgacgactccgtcgaggtcctcctcgacagttgcccagagtacgtgaggagtttgtttacttcctaactttgtgttggtaatactaattagatcaggttctgattggatggattcttttgaaggtgagggacaactggaatagttaaaatcataggtttaacctgcaaaagaacattttgatagtaaaccgatggcaattagaaacagaaagaggaccatttcatctataataacttgaaaagtctgctgaattattaaattattcctgaatagtattgcacatttcactggatcatatcttctgttgttaatactttagctaagattaagttagagcggtgtgatctaggatgaagcgactggtttctaatgcaagtgacagttggaagctctacgacatgtgttttgtgcttacatatgtacacaaaggaatgtgatgatgtctgaaatcttagaggggatgaggatgccaagaggtccagaacccagtatgaagtgatgattttgtttgtcttaatgttatttgttagaaatagaattactattggcatcaaatccttctgttaatcttagttgccttcaggggtgaatccagaacaaaaatgacccgctgtcccatgcatagcactaaatctctacaatactcaaaataaaagagcaccttgtatttaacggcaatcaatattacaaccctatggtttcgcttatgcttatgcatatccggacagctttttattaatcaaaaaaatattttttgggtaaaacttttatatacgattcaaaagcaaatgttgtaaaataaattaggataaaaaaccacaaaattaactccaaaattaagttctaaaatttaaaatttagtttataagcataagcataagcaaaatgatgagtctgaacgcttaccaaaatcaaaacgtatgatggtattaagcaaaatatgagtatccaactacaatagcacgcaaaaggacatacaaagctgttattttgttgcttgcaggctaacaggtgtccaatcaggctagggattgtcgcaatgcatgtgcataggctgttacagtgaaaacaagaaattcaacctgtgtcctgtgcatcatgttgtactaacatgaattcgccccaggttgccttattcttgaataatcggtatataagaagtgataagctgtgtgtgtcagtttgcatgtgattaaaaaaaatctcttatgacgttaatactccgatatagtgagcttactggtttacaaactatttatggttcttgaatctgcagcctggaaattcatattggtttctctgctttaatcatgtagaattatcttcttgtgttgatcttgtcgcatgcagtttatgtgcgtgtttattcttatttctgccccttcaataatattcttgctgagatatgcggcatcttacttattttcctctcctatgcaggtttttcaattcccatgatagggaatttcatgttgcatcacttccttataaacctgacttcaaagttatgcctgagggctgggatggcacaaccagagatcctgatgaggttctgtatgagatttcaatgaaggaagatcagatgctgtatgaggaatttgttcaacggttacagttcaacaagaagaaggtgaggatcttacatttctatttctccctttcatcatctttaattaaataatttggtagtgttgtctttgtttttgttaagtctcagttaaagctcctgctgtttatatgtagtgattagtgaatttgatgttctcttttgatatggaaaggcaaacatgggagacccatgataataatttgttggaatttgtttccttttgtattggaagataaaacactcgaagctatggagtatcttctgtgtaagataacttcatgccaagctatatgcatatgagccagaaaatacatgatgtttaaagacttaaggtccattggttactgaccatcttaatggatcttctgtgttttcccttaagtgatgagtgataggattctgaccttccttccttctttttttttttttgaattgcaggtggcaggcgaggtgaagtgtcataagtacagccgacgacggcccgacgatggatggacctacatggttgagaaacttggagcgcagtcaaagcggggctctggaggtggctggaagttcgccagtttacctgatggatcaagccgcccactaaacgatatggagaagatgtatgtgaagagggagactccaaaacggcggaggaggataatggcacccttcaagtaacaagaatacactctacttaccgttttgcaggttttcttaacactcttttggcattattcaggaaagcagaaatactgaaaccgtctcaagttttaaccaccagtgttggtcctgtccttttgcagcatagggaggtggttattgtattcatgtcatttgtagcaagttccgttgcccccttctatatttgaactgttggcgtatcaccatcacctcattgccaggcagcacactcgataaccttgggttgccaggcaacttgtagtcaacatttcataaaatcaccttttgcaatgtgatgcacagttatgtttaatgcaagtaaggaagtagtccataattaaggttgcttgtagctgtggatggaaggcctaaaatacattggtgatcttcctaagatacatttgtgatccggggagatatgcttttctgattgtcttaataaaatcgtagtgcgttttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0801700, RefSeq:Os01g0801700