Os10g0512100

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0512100| Description = Protein of unknown function DUF726 family protein| Version = NM_001189308.1 GI:297727746 GeneID:9269754| Length = 42...")
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Gene Name

Os10g0512100

Description

Protein of unknown function DUF726 family protein

Version

NM_001189308.1 GI:297727746 GeneID:9269754

Length

4258 bp

Definition

Oryza sativa Japonica Group Os10g0512100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20171144..20175401

Sequence Coding Region

20171144..20171284,20171366..20171423,20171511..20171581,20171791..20171867,20171939..20172021
,20172098..20172157,20172446..20172581,20172686..20172756,20172999..20173090
,20173224..20173321,20173451..20173603,20173693..20173858,20174551..20174949
,20175031..20175112,20175178..20175401

Expression

GEO Profiles:Os10g0512100

Genome Context

<gbrowseImage1> name=NC_008403:20171144..20175401 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20171144..20175401 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgtcgtcgacgctgagccagacgcagcggtacgcggcgggggcgctcctggcgctcgcgctccgccaggcgcagatccaccagtccgtcctgctcggatcccacggcctcgacgacgccccggccgccgctgccgcagtcccctctctcgccgaccccgtcgacgcccgccacctctggacccacgactcccacggcctcctccgccccgtcctcaggtttctcgagatcgaccacaaggcatggccgggcgtggagacgacggccgccacctccgagcccaagcaccacatcggagcctttctccggaaggtgttcgaggacgaggacgacggcgaggcggcggcggcggagaggtcggagcaggagctcgcgctcgccaaggccgtcgaggcgatggcgatggggctggagaacgacgtagtcgcggccgacgagctgatcaaggccaccggctccgggggggacggcgacgaagggtggccgtggctggcgtcggcgtcgtcggccggcggcagccgcaccaaggattaccggaagatggcggtgctgtacatgctcctctcggcgtgcgtcgccgacgtgaacatggcggaggaaggcatgggctcgcctcgcatcaggaggggctacgacgcccgccaccgcgtcgcgctccggctgctcgcgacatggctcgacgtcaagtggatcaagatggaagctatcgagataatggttgcttgctctgctatggctgcagcgagagaggaagaacagtcagaaggaagcgagtcaccaagaagcagatgggagaactggaagcgtggaggaatcatcggcgcagccgccttgacgggaggaacgctgatggccatctccgggggtttagctgctccagcaattgctgcaggattcactgctctggttccaacattgcacacacttatccctttaataggagctagtgggtttgctgctatagctactgctgctggacatactgcaggctctgtagcggttgctgcatcattcggagctgctggagctgggttgactgggaccaaaatggccaaaagaattggttgtgtgagagaatttgagttcaacactatcggcgagaaccataaccagggtcggctagcagttgccatcttggtcactggatttgcctttaccgaggaagattatatgaagccatgggaaggatggaagacaaacttagagaggtacattctgcaatgggagtctaagcatataattggcgtcagtacagcaatacgcgattggctggcatcaagatttgcaattgagttgatgagggaaggtgcaatgcaaactgtgttaagtggtattgtttctgcgtttgcatggccggcttacttggtatctgctgcagattttatcgatagtaaatggtccattgctattgacagggcagataagactgggaaaatgcttgctgaagtgctgctcagaggattgcaaggaagcaggcctgtcactctcatcgggttttccctaggggcacgtgttgtcttcaagtgtttggaggaactagctttgttgggaaataatgagggactcgttgaaagagctgtgatgataggtgcaccagtttcagataaggaggagctgtgggagtctaccaggaagatggttgctggacgatttgtgaatgtttactccacaaatgattggattctcggtatcacttttcgagcaagcctgctttcacaaggcttggccggcatccaagcagttaatgtacctggagttgaaaatgttgatgccagtgagctcatcgttggacattcttcctacttgacacttgtcaatcaaatcctggaccagcttgagctgaacacctactatcctgtcttctatcccagcacaccaaagtgcggcacaccgaagtcaaagtaa</cdnaseq>

Protein Sequence

<aaseq>MATSSTLSQTQRYAAGALLALALRQAQIHQSVLLGSHGLDDAPA AAAAVPSLADPVDARHLWTHDSHGLLRPVLRFLEIDHKAWPGVETTAATSEPKHHIGA FLRKVFEDEDDGEAAAAERSEQELALAKAVEAMAMGLENDVVAADELIKATGSGGDGD EGWPWLASASSAGGSRTKDYRKMAVLYMLLSACVADVNMAEEGMGSPRIRRGYDARHR VALRLLATWLDVKWIKMEAIEIMVACSAMAAAREEEQSEGSESPRSRWENWKRGGIIG AAALTGGTLMAISGGLAAPAIAAGFTALVPTLHTLIPLIGASGFAAIATAAGHTAGSV AVAASFGAAGAGLTGTKMAKRIGCVREFEFNTIGENHNQGRLAVAILVTGFAFTEEDY MKPWEGWKTNLERYILQWESKHIIGVSTAIRDWLASRFAIELMREGAMQTVLSGIVSA FAWPAYLVSAADFIDSKWSIAIDRADKTGKMLAEVLLRGLQGSRPVTLIGFSLGARVV FKCLEELALLGNNEGLVERAVMIGAPVSDKEELWESTRKMVAGRFVNVYSTNDWILGI TFRASLLSQGLAGIQAVNVPGVENVDASELIVGHSSYLTLVNQILDQLELNTYYPVFY PSTPKCGTPKSK</aaseq>

Gene Sequence

<dnaseqindica>4118..4258#3979..4036#3821..3891#3535..3611#3381..3463#3245..3304#2821..2956#2646..2716#2312..2403#2081..2178#1799..1951#1544..1709#453..851#290..371#1..224#atggcgacgtcgtcgacgctgagccagacgcagcggtacgcggcgggggcgctcctggcgctcgcgctccgccaggcgcagatccaccagtccgtcctgctcggatcccacggcctcgacgacgccccggccgccgctgccgcagtcccctctctcgccgaccccgtcgacgcccgccacctctggacccacgactcccacggcctcctccgccccgtcctcaggtatccatctccaaaccccatcaaatcgatcgatggatcgccattgattgatgaatttctctcaggtttctcgagatcgaccacaaggcatggccgggcgtggagacgacggccgccacctccgagcccaagcaccacatcggagccgtacgcgccccaatgcaatctccaatgtaaaaccatttccatggcgattcaatcgtgacatactttttttttccttctcagtttctccggaaggtgttcgaggacgaggacgacggcgaggcggcggcggcggagaggtcggagcaggagctcgcgctcgccaaggccgtcgaggcgatggcgatggggctggagaacgacgtagtcgcggccgacgagctgatcaaggccaccggctccgggggggacggcgacgaagggtggccgtggctggcgtcggcgtcgtcggccggcggcagccgcaccaaggattaccggaagatggcggtgctgtacatgctcctctcggcgtgcgtcgccgacgtgaacatggcggaggaaggcatgggctcgcctcgcatcaggaggggctacgacgcccgccaccgcgtcgcgctccggctgctcgcgacatggctcgacgtcaagtggatcaagatggtaagatttgtccagagattccattgcttttcttacaagataagatcactaacactccctctgatcataggtagtccatccgtcccaaaatataaggtattggagtaggataggacacatctatgtccagattcgtactactagaatgtgtcacaaccagccaaaattatttatattttaggacggatggagtatttgatttgatgtttaggacaagattctaaacttgtaaaactatgaccatataatttttttgttagaatgagtttataaaatacaataagtttcaatgttacgatattactattcaagggaaatttgcttacaccattttttaactaggaatttcgaggaattattcatggtcaaagtttcaaaagaagtttgactaacttgtcctaagcatcaaatgttttatgaccatagtgtccagtagtctcattatctgtgatcactagattagttttttcatgaaaatgctagaagtctagaacacatgacagggtacatttagcacagcattctcttttttttttggataacagcacagcattctcgtccatgtgaaattaggatagaaagaaagcctagttgtacatgtaaatgcacacgctaagaacagtgatctctctaccagttttgtcatggacacaaactatatgtttttgtaatcgaacgttttggcattgtaggaagctatcgagataatggttgcttgctctgctatggctgcagcgagagaggaagaacagtcagaaggaagcgagtcaccaagaagcagatgggagaactggaagcgtggaggaatcatcggcgcagccgccttgacgggaggaacgctgatggccatctccgggggtatatgacctgaaagaaatttggatgaacttatgaaatgtcagatcaagataagttctgtaactgaataatttcgtctgaactttcaggtttagctgctccagcaattgctgcaggattcactgctctggttccaacattgcacacacttatccctttaataggagctagtgggtttgctgctatagctactgctgctggacatactgcaggctctgtagcggttgctgcatcattcggaggtgagcgtagatggtttttgaatattaatttggtgatactattccttatttggaggtgtttatttctgaacccagcaggaatcttttatcaggatctgtaactaaccagcatcttaacttgaaaatcagctgctggagctgggttgactgggaccaaaatggccaaaagaattggttgtgtgagagaatttgagttcaacactatcggcgagaaccataaccagggtgtgagtttttgttctcttgtgttattttgattcgatgttggaaaggttcagagagcataaagcaaagatgttatccctagtcttcgataaaactttttcgagtggatgacacttaataggattgacatttcagcggctagcagttgccatcttggtcactggatttgcctttaccgaggaagattatatgaagccatgggaaggatggaagacaaacttagagaggtacaaccccccaaaagacattcacacgaaatactttttcaaaaaaaaagttctctttgtagtttgcaagtactttggtattaacatagccatgatagtcctattgcattctgtttagaaaccaaaatattcacatgagatgaatacaggtaagattcatgcagctgttgtccctatcaatatcgttgcattttctagaacatgtttgccttgcttaagtacaagaaacttgtaattggcaggtacattctgcaatgggagtctaagcatataattggcgtcagtacagcaatacgcgattggctggcatcaagtaattttggcgttcgacgtgtacagtgtttgcgtttatttctttctttcatactttactgattactcaacataaaattgtccggttgttggttaatgatgtaggatttgcaattgagttgatgagggaaggtgcaatgcaaactgtgttaagtggtattgtttctgcgtttgcatggccggcttacttggtatctgctgcagattttatcgatagtaaatggtccattgctattgacaggtgacataatgaactctcattacataaactaatgctgatgcatttttcccttttctgtacaaaactggtctcttttttttcattagttgtacaaaagctgaaaacagaacagagaatacaattatcttgaaactaatgagcaatgcgttcgcgaaaaagaaactaatgagcaatgataaaaacgaaaaaatgcaacaaacttaaagctgtaatgtatgcattaatctttttttatcctttccaaaattacatgagcgcacaagaaattaattgagtagatgtttccagggcagataagactgggaaaatgcttgctgaagtgctgctcagaggattgcaaggaagcaggtaattctctgcctagaatgtacaatccagtagacttcatttctcaatggaactaattttttactgggatttctaggcctgtcactctcatcgggttttccctaggggcacgtgttgtcttcaagtgtttggaggaactagctttgttgggaaataatggtacctcttaactatgtgcatatatgaaactttatttatagcttgtttggctgacctttcattgtgaatagagggactcgttgaaagagctgtgatgataggtgcaccagtttcagataaggaggagctgtgggagtctaccaggaaggtatggtagttctatagattccaactgcttgaaactatagccttgagcacattactaactcttatgtgaattttacactactgtactgaaagtaaagtcacaaatgaaatgagtgctaattgctcgaagaaaccacctataattttagcaaatcttaccttgctccatgtcatcttctcactagtatggatggccatgcatttccgcagatggttgctggacgatttgtgaatgtttactccacaaatgattggattctcggtatcacttttcgagcaaggtaaatctgactcatatttcagaatcactatcacagattgtggatgtggagtcatcattttttccatgaaaatgatctctcatgtagcctgctttcacaaggcttggccggcatccaagcagttaatgtacctggagttgaaaatgtaagtgtgttgcggcattcaactgggccaaaaaatttcctctatacagctaaaaactcgataatatttctgaactcacaggttgatgccagtgagctcatcgttggacattcttcctacttgacacttgtcaatcaaatcctggaccagcttgagctgaacacctactatcctgtcttctatcccagcacaccaaagtgcggcacaccgaagtcaaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0512100, RefSeq:Os10g0512100