Os01g0802700

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Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0802700| Description = Auxin Efflux Carrier family protein| Version = NM_001051083.1 GI:115440536 GeneID:4327533| Length = 2769 bp| Defini...")
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Gene Name

Os01g0802700

Description

Auxin Efflux Carrier family protein

Version

NM_001051083.1 GI:115440536 GeneID:4327533

Length

2769 bp

Definition

Oryza sativa Japonica Group Os01g0802700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35759538..35762306

Sequence Coding Region

35759840..35759906,35760018..35760094,35760688..35760845,35760994..35761079,35761262..35762154

Expression

GEO Profiles:Os01g0802700

Genome Context

<gbrowseImage1> name=NC_008394:35759538..35762306 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35759538..35762306 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattacgggttcggaggtgtaccaggtggtggaggcgatggcgccgctgtacacggcggcggcgctggggtacgggtcggtgcggtggctgaaggcgttctccaacgagcagtgcgccgggatcaaccacttcgtggcgctctacgccgtgccggtgctcatcttcgacatggtgtccaccaacaacgtgtacaagatgaacggccgcctcatcgccgccgacacgctgcagaaggccgtgctgctgctgggcctcatggcgtgggcgctctgggagcggtcgcgcgcgcgcggcgccggggccaaggccaaggcggcggtgtcgtcgccgctgcagtgggtcatcacctgcttctccgtcgcgtcgctgcccaacaccatcatcatgggcgtcccgctcctcaacggcatgtacgggcccgtgtccaaggacctcatgaagcagatcgtcgtcatgcagttctgcatctggtacaacgtcatcatcttcctctacgagtacatggcggcgcgtagatcggcctcggcgccgccgccggcgtcgtcggagggcagcgccaagatcagcccttcgtcgccggtgaaagctgctgcggcggcggcggacacaaacggcaatgctgtcgcggccgaccggccgcaagaagtggcggtgaacatcgaaatcacggagatggcggcgtccacggcacgagacggcgtgtccggcgagacgacggcggccgccaaggaggtgagctctggtgaagttgctccggtggaagaggaggaggcgtctgcgccagcgccgtcgatgaagcacgtcatctggatggcggtgaagaagctgctacagattccgaatacctatgcaagcttccttggcctcatctggtctctaatcgcattcaagtgtggattctcgatgccaaaaatcgtcgaggactctctgttcaccattcgtaccaccgctgtaggcctaagcatgttttcttcagggacgttcatagcgcggcagtcgcggttcgtgccgtgcggatacaagatagcgtcgttctccatggtcatcaagtttctgataggcccggttgtgatgctgttcgcctcgctcgtcatcggcatgcacggcacacttctgcacatcgctgttgtgcaggcggctctccccctggcagtgacatcatttgtgtacgctgaagagtacaaggtccacgcagacatcatgagcacaggggttattcttgggatatttatatcacttcctgtgacaattgtttactatattctgttggggctgtga</cdnaseq>

Protein Sequence

<aaseq>MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINH FVALYAVPVLIFDMVSTNNVYKMNGRLIAADTLQKAVLLLGLMAWALWERSRARGAGA KAKAAVSSPLQWVITCFSVASLPNTIIMGVPLLNGMYGPVSKDLMKQIVVMQFCIWYN VIIFLYEYMAARRSASAPPPASSEGSAKISPSSPVKAAAAAADTNGNAVAADRPQEVA VNIEITEMAASTARDGVSGETTAAAKEVSSGEVAPVEEEEASAPAPSMKHVIWMAVKK LLQIPNTYASFLGLIWSLIAFKCGFSMPKIVEDSLFTIRTTAVGLSMFSSGTFIARQS RFVPCGYKIASFSMVIKFLIGPVVMLFASLVIGMHGTLLHIAVVQAALPLAVTSFVYA EEYKVHADIMSTGVILGIFISLPVTIVYYILLGL</aaseq>

Gene Sequence

<dnaseqindica>2401..2467#2213..2289#1462..1619#1228..1313#153..1045#aaactctcacactacaacaaccacaacacactactactagtgagactagtaagcgtcatcacgagatccaggtttaatagatcgtttaatctaccaccgttgatttagaaaggggttgaggggagggtagtagtagctaagttagggcaaagatgattacgggttcggaggtgtaccaggtggtggaggcgatggcgccgctgtacacggcggcggcgctggggtacgggtcggtgcggtggctgaaggcgttctccaacgagcagtgcgccgggatcaaccacttcgtggcgctctacgccgtgccggtgctcatcttcgacatggtgtccaccaacaacgtgtacaagatgaacggccgcctcatcgccgccgacacgctgcagaaggccgtgctgctgctgggcctcatggcgtgggcgctctgggagcggtcgcgcgcgcgcggcgccggggccaaggccaaggcggcggtgtcgtcgccgctgcagtgggtcatcacctgcttctccgtcgcgtcgctgcccaacaccatcatcatgggcgtcccgctcctcaacggcatgtacgggcccgtgtccaaggacctcatgaagcagatcgtcgtcatgcagttctgcatctggtacaacgtcatcatcttcctctacgagtacatggcggcgcgtagatcggcctcggcgccgccgccggcgtcgtcggagggcagcgccaagatcagcccttcgtcgccggtgaaagctgctgcggcggcggcggacacaaacggcaatgctgtcgcggccgaccggccgcaagaagtggcggtgaacatcgaaatcacggagatggcggcgtccacggcacgagacggcgtgtccggcgagacgacggcggccgccaaggaggtgagctctggtgaagttgctccggtggaagaggaggaggcgtctgcgccagcgccgtcgatgaagcacgtcatctggatggcggtgaagaagctgctacagattccgaatacctatgcaagcttccttggcctcatctggtctctaatcgcattcaagtacgtctttttcatccatgtctcgtactactaccaactacacttagcaacatctctcacgtgtacgtactgtaccgtactatctctgtccggaattgttctattttagttctcccctgcagtcacaaaaaaaaaaattgaaatccctctttttaatggacatgcacttgtgtgttttgcaggtgtggattctcgatgccaaaaatcgtcgaggactctctgttcaccattcgtaccaccgctgtaggcctaagcatgttttcttcaggttagtacgacgacatgacgtattgacatctccgtttacatttggaactgttggacttcaaccgtgggcctgcttcctccaaagaggagattattacctcgtcatctgctaatgtaattaagcgtgatttttttttgcgtttctgcagggacgttcatagcgcggcagtcgcggttcgtgccgtgcggatacaagatagcgtcgttctccatggtcatcaagtttctgataggcccggttgtgatgctgttcgcctcgctcgtcatcggcatgcacggcacacttctgcacatcgctgttgtgcaggtgagatcacacgagcagtttacacatcaccgacttatcaaaaaagtttacacatcaccttgtgcacatttctgcccattaaaattaagtggacagaaattatacacatgaattccaaattcgacatgaaaaaaaaaacataacgcaaatatgcttcaaagtgaggacgcctacgcgaaaaagggttattttttcttgacggattgtcctagccgccatttcagttgcagataacggaaaatggcatagtgaaagatgattgttcacgcttgtagaagtgaggagacgtacgtccaagaaggaaaagttagttgcaaagctgtacttcctccattttaaaatatagcagacggagggagtagtattcatgtagagtagtactttctagtttgatgtgatcaattaatacgagtagtaacacaatttcagaaatctagccaacttattttggttggagtacaggagtatttcggcaccctcgtttgatgtgatcaattaatacgagtagtaacacaatttaagaaatctagccaacttattttggttggagtacaggagtatttctctgaccacaatttttcacatgcatgcaggcggctctccccctggcagtgacatcatttgtgtacgctgaagagtacaaggtccacgcagacatcatgagcacagggtttgtttcttaaccaaatactgttaaggttcagaagtatttcaattctcttctgattaatgcaagtgcccatctgactgatcattttggatttctttttgtgccttgcagggttattcttgggatatttatatcacttcctgtgacaattgtttactatattctgttggggctgtgagcctgtgattgagacatctaaatttagtcgaaggctaattaaagttgcatgtgtgctgatgtgcatatatgtaggaagacagaatacaaacagtaaaaatactgaaggatgacaacaaggtgaattgatttccctccggagcctgaagattggggttctggcgagagatacagtgagatgtgactgtaatgtttggtaataataagatgtcacaaaaacgcggcatatatgctgaaacttttgcaatgtacagcaagtatacaatgaacagggcttattacagcccaccagttgattcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0802700, RefSeq:Os01g0802700