Os01g0805900

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Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0805900| Description = Tubulin beta-2 chain (Beta-2 tubulin)| Version = NM_001051100.1 GI:115440570 GeneID:4327550| Length = 3801 bp| Defi...")
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Gene Name

Os01g0805900

Description

Tubulin beta-2 chain (Beta-2 tubulin)

Version

NM_001051100.1 GI:115440570 GeneID:4327550

Length

3801 bp

Definition

Oryza sativa Japonica Group Os01g0805900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35923791..35927591

Sequence Coding Region

35924749..35925142,35925850..35926119,35926532..35927211

Expression

GEO Profiles:Os01g0805900

Genome Context

<gbrowseImage1> name=NC_008394:35923791..35927591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35923791..35927591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagagatcctgcacatccaaggcgggcaatgtggcaaccagatcggtgccaaattctgggaggtggtgtgtgatgagcatggcattgaccctaccgggcggtacacaggcaactcagatctgcagttggagcgtgtcaatgtgtactacaatgaggcctcctgcggtcgctttgtgcctcgtgctgttctcatggaccttgagcctggtactatggacagtgtccgcactggaccctatggccagatcttccgccctgacaactttgtgttcgggcaatctggtgctggtaacaactgggccaagggacactacactgagggtgccgagctaattgattctgttttagatgttgtgaggaaggaggctgagaactgtgactgcctgcaaggattccaagtatgccactctcttggtggtggtactggatctggtatgggtacacttttgatatcaaagatcagggaggagtaccctgaccgcatgatgctgacattctcagttttcccctcaccaaaagtatctgatactgtggttgagccatacaatgctacactctcagtccatcagttggttgagaatgctgatgagtgtatggttcttgataatgaggctctctacgacatttgcttcaggactctcaagctgaccacacctagctttggggatttgaaccatttgatttctgccaccatgagtggagtcacatgctgcctaaggttccctggtcagttgaactctgacctccgtaagctggcagtgaaccttatcccctttccccgtctccacttcttcatggtcggattcgccccgctgacatcacgtggctcccagcagtaccgtgcccttactgttcctgagctcacacagcagatgtgggatgccaagaacatgatgtgcgctgctgatcctcgccatggccgttacctcaccgcctctgccatgttccgtggaaagatgagcaccaaggaggttgatgagcagatgatcaatgtccagaacaagaactcatcctacttcgtcgagtggatccccaacaatgtgaagtccagtgtctgtgacattccaccgagaggcctctccatggcatcgaccttcattggcaactcaacatccatccaggagatgttccggagggtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcactggtacactggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaacgaccttgtctctgagtaccagcagtaccaggatgccaccgccgatgaggagggcgagtacgaggacgaggagcagcaggaggctgacgacatgtaa</cdnaseq>

Protein Sequence

<aaseq>MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWA KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP DRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQ NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRK AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGEYEDEEQQEADDM</aaseq>

Gene Sequence

<dnaseqindica>959..1352#2060..2329#2742..3421#tccacccacccctcgatctctcgctcgctcgccgccgatcggatcgcgtggttggatcatcacaactcgtaagaaaaatctcttcgactctctcgtgatgtatcggaggattgtagatctgttaggtttgggttcgagtcttcgagatgtgtttgtgatcggatccgttgttttggtgcgaattttggtggcataaattttgtttttcgaatgtttagggtatatttggtcgaggaaaccggtaatgtattgggatccgcggggattttcgccgatttcattgttccgtagaactgcgtagcccgtgaaatttagccccttgtagttttgttttggttggtttggtgaaaatgttggtaggccgcactggatctgtagaatttcgagtgctttatgccatctctatctcgtggatggctgggctgggataatgtagatacttgtggactttcttttttttttttgaaataagatacttgtggacttttgattttgggggatttcaactgggatatgtataagctattcctgcagttctgcttcactatgaggcatttcgagtgtatttagcttttagcctataaatccgatgccagaataccgatccatttttaggtggtctggtgtgtatgatgatgcatttagatggaccatcggtgattgaactgtgaagacactaggttttagccattttagcatacgaaactccagatctggctctgctcaacttgatctgtgaagaaattcagtgacatttcttatctagtagtagcacaacatgaatgattacttttcctgcttttatgggatgtttagatctgtcggctaagtaaattatactgtgcgaccacctcctttgtgctttgagtacttgagctgccattagcattgcttgttgtaagctcaatatctgtgattcactcaccagtgttgttccacttccctttgcagtgcaaagatgagagagatcctgcacatccaaggcgggcaatgtggcaaccagatcggtgccaaattctgggaggtggtgtgtgatgagcatggcattgaccctaccgggcggtacacaggcaactcagatctgcagttggagcgtgtcaatgtgtactacaatgaggcctcctgcggtcgctttgtgcctcgtgctgttctcatggaccttgagcctggtactatggacagtgtccgcactggaccctatggccagatcttccgccctgacaactttgtgttcgggcaatctggtgctggtaacaactgggccaagggacactacactgagggtgccgagctaattgattctgttttagatgttgtgaggaaggaggctgagaactgtgactgcctgcaaggtaaattggtaactaaatttctgatagttgctagataatttctttttaaattgattaggatgcagacgcttacttgaggttcatcctttaacatgctgtgaatctcgcaatatgatgcatggtagtgccatcatagaccatataagtaatgttgtaccaatgtagtgtatctatttgttagtatgaaacatattgcagatgagctattgtgacttattctttattggttcaaaggacattgattatccttgcaaattgtgtagtgccccaattgaatttatatccatggttccttgtcattttactatgcagttattcattgattttgtaccccgatgcaaatcatatcaatatttagatggttgtgtattctgataggtccctctgtctaaggtagcatgtgtgccatatgaatacatattcagcactattttacagtccatgcattagggtatgcacattcagcattctgttcttcaaattatttagtcaaccaaagactttgcacaacaagccttttatcagtgaaatgtccatgttagataatctagtgatcagcaacaattatatgattaaccctatttaagaaatttgtgcttataatgcactttgctcaacgaatgtactgtatttttttacatctgagcaaccatacttcattatattatgttgcaatcatttctaaagccctctacctctataatcaggattccaagtatgccactctcttggtggtggtactggatctggtatgggtacacttttgatatcaaagatcagggaggagtaccctgaccgcatgatgctgacattctcagttttcccctcaccaaaagtatctgatactgtggttgagccatacaatgctacactctcagtccatcagttggttgagaatgctgatgagtgtatggttcttgataatgaggctctctacgacatttgcttcaggactctcaagctgaccacacctagctgtaagctgcttcaacttttccagttttactgaatacaaactggtgcaacatttgtgtgtttgtaatcattatttgcatatacttggctatgcagatatacacattcttgttctagcagcttctctactacatgctaaacaatccgtcattatttttgcactataatctagaattaacaatacacttattcatagtcttgctgtttggtgtgtataactgtatataattatgaaaactacacttttagagcaggattcatgctaaacataaaggcgttgactccagttagtgatttgctttgtcatattgttgtttgtttggacatgttatatttttgttatcaacatatacccgcataattttcaaccattgcgccatataacattttccacatgtttgccattttatgcagttggggatttgaaccatttgatttctgccaccatgagtggagtcacatgctgcctaaggttccctggtcagttgaactctgacctccgtaagctggcagtgaaccttatcccctttccccgtctccacttcttcatggtcggattcgccccgctgacatcacgtggctcccagcagtaccgtgcccttactgttcctgagctcacacagcagatgtgggatgccaagaacatgatgtgcgctgctgatcctcgccatggccgttacctcaccgcctctgccatgttccgtggaaagatgagcaccaaggaggttgatgagcagatgatcaatgtccagaacaagaactcatcctacttcgtcgagtggatccccaacaatgtgaagtccagtgtctgtgacattccaccgagaggcctctccatggcatcgaccttcattggcaactcaacatccatccaggagatgttccggagggtgagcgagcagttcactgctatgttcaggaggaaggctttcttgcactggtacactggcgaaggcatggacgagatggagttcaccgaggcagagagcaacatgaacgaccttgtctctgagtaccagcagtaccaggatgccaccgccgatgaggagggcgagtacgaggacgaggagcagcaggaggctgacgacatgtaaggtggcttttgcttggtggttctagggcagggttttgtgtgcttggtgtttccgtcttacattatcaccgtattaccgcctcgtacgccaccgcccgcttcctatgtcttcgctttgttttttcgtctgtgctatgggaacctttttgggtactgtattacttgatgctggtctgcgattgttgatatttcggatgaattttacctttccgcgttggtcctcgtgtgcaatatttgcaaattacaaggaactaggaaggtagcccgcgcattcgcgtgggcatgtatcgtaggctgtatttgagataatcgtaagtaataggccgattgtgttaaaatgttgtatttgttatatagtaaactataggcatatagatctta</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0805900, RefSeq:Os01g0805900