Os01g0806200

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Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0806200| Description = Cyclin-like F-box domain containing protein| Version = NM_001051102.1 GI:115440574 GeneID:4327552| Length = 3790 bp|...")
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Gene Name

Os01g0806200

Description

Cyclin-like F-box domain containing protein

Version

NM_001051102.1 GI:115440574 GeneID:4327552

Length

3790 bp

Definition

Oryza sativa Japonica Group Os01g0806200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35938922..35942711

Sequence Coding Region

35939289..35939476,35940000..35940074,35940302..35940480,35940812..35940891,35941149..35941910

Expression

GEO Profiles:Os01g0806200

Genome Context

<gbrowseImage1> name=NC_008394:35938922..35942711 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35938922..35942711 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcagctgctccttatatccaccctcccggccttcacgctgatgctcgtcgcgcccgccgccacgcacaagcactgcaagctcgtgcgggagctcggcctcgtcgcgctcctgctcgtgcgcgagctgctgcaccactccgcctccgccgcgtgcgcgtggggcggcgaaggcggcggaagcagcaacaaggagagggagcgggagcggggggtgaggataatgccgtccaaggcgaagccggagcccgcattggcggcgagggaggagggggaggaggggacggaggcggagctgaacgccgccgcgctcccgctgctcgacctgccggagcttgcgctggagcgcgtcctcgaggagctggagccgccgtcgctcgcggcgatggcgtgcgtgtgcgtcgcgctcagggaccgctgctctgcggacaccctgtgggggcgccacgtcaaccggaagtgggggcgcgtgctcggcgccgccgcgcgcaaggagtgggaggcggagctggccgcacggcggagctccggcgcgctgccgcggccggccaggcggaggagcttggcggactcgctggcctgcgcgtggcccttctcttggatcacctgtcgctggctcaagggcaacgccgtcgccgccgagcccgccgccgccacgccgtcgccactcccctcgccggcgaccgacacggtggccgcctggtaccgcgcggtggagtgcggcgagttctcgttccccgcacaggtgtacaaccgcgaggacgggcatgtcgggttcgtgctgtcgtgctacgacgcccacctccgctatgacaggcgtactgacacattcactgcaaggtacccgccacacgggcggaagccggcgaaggaggagagcggcgtgcagtggagcagggtccgctcgccgccggtgagcacgccggcgcacgacctccacgcctccggctgcctcggtgatcttcgccccggtgaccacttcgagattcagtggaggaagaacaaggatttcccttacggctggtggtatggtgtcgtgggtcaccaggagacatgcaacgccaacgagcatctgtgtcgctgccatgaggacgatatggttgtcctggagttcaagcactacgcggccggctcgcggtggaggcagacgacggtgagcaggaaggatcacagggagaaaggcgacgagacggacgggttctacggcggcatcaggaagctccagacgagcgacgagatctcgacttggcgaaagttctggccggtcgatgtcctcaactga</cdnaseq>

Protein Sequence

<aaseq>MLQLLLISTLPAFTLMLVAPAATHKHCKLVRELGLVALLLVREL LHHSASAACAWGGEGGGSSNKERERERGVRIMPSKAKPEPALAAREEGEEGTEAELNA AALPLLDLPELALERVLEELEPPSLAAMACVCVALRDRCSADTLWGRHVNRKWGRVLG AAARKEWEAELAARRSSGALPRPARRRSLADSLACAWPFSWITCRWLKGNAVAAEPAA ATPSPLPSPATDTVAAWYRAVECGEFSFPAQVYNREDGHVGFVLSCYDAHLRYDRRTD TFTARYPPHGRKPAKEESGVQWSRVRSPPVSTPAHDLHASGCLGDLRPGDHFEIQWRK NKDFPYGWWYGVVGHQETCNANEHLCRCHEDDMVVLEFKHYAAGSRWRQTTVSRKDHR EKGDETDGFYGGIRKLQTSDEISTWRKFWPVDVLN</aaseq>

Gene Sequence

<dnaseqindica>3236..3423#2638..2712#2232..2410#1821..1900#802..1563#ggaaaacttcatgttcacagcattaacccacaaattgccctcccctcccccctcctcttcaccgagccaaatccgcacacatatatatatcccacctaaaacccaccaaccaaatcctccacgaacaaaaacaaaggcgcacaacgaacccgcagccagccaaccgcagcagtggtactatgttgtttgccatgggcaaaggcaaggtgatcaccagcaagcaggccatgaccatgttctcttctccgtggtaggagtatactggtagacgactacgagactactagagtactagtgctgctactgtgggaagcttttgggtgggggcagcggtggctgtggctggcgccaagaaagcagaagagggcagtggcatcggcgagcgacgacgcgacgcgaggcgaggcagaggagggcggcagggggaggcaggaatcattcggctgcaaagctgccgtcgccacctcgtcgccactgtccccgctttccggggccgcgccctatcctgccacctctccctctctcgcccgcgcagtccacgcacgcagcgctgtcgttcgttgcaccaccaccaccacctccaccaccaccgcgcgcaccggcaccgcatcgcatcgcgcccgcaacgcaccactccaccaccaccaacaacaacagcaagattacaagaggctgctcgtccgcgggcgcgggcgcgggagcgcgtcgtcctcggtagacaagaaagaagaaggcggctttacttggattggtgctcgcttttttttttctctctccttttttctttttcttctccctgagatgcttcagctgctccttatatccaccctcccggccttcacgctgatgctcgtcgcgcccgccgccacgcacaagcactgcaagctcgtgcgggagctcggcctcgtcgcgctcctgctcgtgcgcgagctgctgcaccactccgcctccgccgcgtgcgcgtggggcggcgaaggcggcggaagcagcaacaaggagagggagcgggagcggggggtgaggataatgccgtccaaggcgaagccggagcccgcattggcggcgagggaggagggggaggaggggacggaggcggagctgaacgccgccgcgctcccgctgctcgacctgccggagcttgcgctggagcgcgtcctcgaggagctggagccgccgtcgctcgcggcgatggcgtgcgtgtgcgtcgcgctcagggaccgctgctctgcggacaccctgtgggggcgccacgtcaaccggaagtgggggcgcgtgctcggcgccgccgcgcgcaaggagtgggaggcggagctggccgcacggcggagctccggcgcgctgccgcggccggccaggcggaggagcttggcggactcgctggcctgcgcgtggcccttctcttggatcacctgtcgctggctcaagggcaacgccgtcgccgccgagcccgccgccgccacgccgtcgccactcccctcgccggcgaccgacacggtggccgcctggtaccgcgcggtggagtgcggcgagttctcgttccccgcacaggtgtacaaccgcgaggtaaaaatctaaaaatccattctcaaaaaaaaaaaaattctaaaaatccactcgttttctagctgtaataaaggctcaactttttttttttagtaatggaaacaacttcctattaaggccttaactactcgtattcaattgaggtttaactatcttgacacagtactattgattatggctatcagcctatcactacattttaggtaggagtatcacggtttcgttttggtttaacaattgaagaatatctttagcaggacgggcatgtcgggttcgtgctgtcgtgctacgacgcccacctccgctatgacaggcgtactgacacattcactgcaaggtacgtaaccaacctgatcaaagtgatcatgctgctattaactcactgtcacgaactcacgattgcattaacctcaatcaccaaaagctagctaattaattaatccatgcgctggtgatcagtttcggtttatttagcagagctgctagtggttagttgctgcacatgtatgttagacgagcaatcgatagcatgccatgattggaatttatgagtgcgataaggaaacctttttgggctgatattggctgcgaacatcgattaggatggctttgatattttgagatcgattggtgatgggcgatggcttggctttgactgttttttacaggtacccgccacacgggcggaagccggcgaaggaggagagcggcgtgcagtggagcagggtccgctcgccgccggtgagcacgccggcgcacgacctccacgcctccggctgcctcggtgatcttcgccccggtgaccacttcgagattcagtggaggaagaacaaggatttcccttacggtatggttcagagttcacacttcagcaagccaagattaactactagtagcacacacattttggtcactgaaaatttggggagaaaaaaagagagtacctgcttgggcaatttggggtattatgccattgcacattgatgattctagcgttggattagctgacggattggatatgatttagtggtgatggatcgattgattgatgcttttgtctctgatgggctacaggctggtggtatggtgtcgtgggtcaccaggagacatgcaacgccaacgagcatctgtgtcgctgccatgaggacggtaaagatcccgtttactttctcccgccatcttttgttttacctttatctgatgtcggcactcggcagcgacacgtgcggccgagataaatctcaaaaacattaggaaaagagcacaggctataccgtacgggaagagcgtggctatcacattatcaatcttctgtctgctcgttatgctatattctgatgatcagatggaagatgagggcataataattgcataaaggaggaagaaattgatattcggaggggacatatcggagacagtaaagattcttggcctttttcttctttggagaaatcggatcaagattctttgcctccaaaccacaacttgcgtgatacttcgtagtacactctggctacagtattattccccttttgtttgcatctcgtgccattcatatccacaagagactgtacatggaccatcattgtcagctgattacagttgatgcatcccagcgatcattctgtatgttgctgagctctttctgaatctcgttgtgcatttctggcagatatggttgtcctggagttcaagcactacgcggccggctcgcggtggaggcagacgacggtgagcaggaaggatcacagggagaaaggcgacgagacggacgggttctacggcggcatcaggaagctccagacgagcgacgagatctcgacttggcgaaagttctggccggtcgatgtcctcaactgatcaggacaatgtgaatgaaatacgcatctgatctgcctgcccgctatatgtgcatcctggtggtgttgccgttgtatagcccgtacgtcgagcggcagcgctgcgtgaccctgtctgaaaggctccgctcaccagctgctctgttcttactgaattttttttggtagcgagatgaggtgaaaaattgatggaggattcgaggatttgttcagcgcaagatccgtcggaacggaaggaacaactataggctattgatgatgatgtacagatttactcagcttgtcccgtgctgttgctggactgaatccttcagtccatatgtcgtgtaagatcatgtttccttctgaatgttatcctgttcaatctt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0806200, RefSeq:Os01g0806200