Os01g0808400

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Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0808400| Description = Similar to Calcium-dependent protein kinase (Fragment)| Version = NM_001051110.1 GI:115440590 GeneID:4327560| Length...")
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Gene Name

Os01g0808400

Description

Similar to Calcium-dependent protein kinase (Fragment)

Version

NM_001051110.1 GI:115440590 GeneID:4327560

Length

2579 bp

Definition

Oryza sativa Japonica Group Os01g0808400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36081157..36083735

Sequence Coding Region

36081273..36081916,36082010..36082154,36082249..36082402,36082494..36082609,36082723..36082890
,36083012..36083139,36083233..36083332,36083454..36083546

Expression

GEO Profiles:Os01g0808400

Genome Context

<gbrowseImage1> name=NC_008394:36081157..36083735 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36081157..36083735 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgctgtcctggctctggggatgcggagcccgcctcctccgacgcctccaccggcaacggctcgtcctccttcaaggccggcgcgtcgccgtcgtcggcgcccgcgcagaacaagccgccggcgcccatcgggcccgtgctcggccgccccatggaggacgtccggagcatctacaccatcggcaaggagctcgggcgcgggcagttcggcgtcacctccctgtgcacccacaaggcgacggggcagaagttcgcgtgcaagaccatcgccaagcggaagctgtccaccaaggaggacgtggaggacgtgcggcgggaggtgcagatcatgtaccacctcgccgggcagcccaacgtggtggagctcaagggcgcctacgaggacaagcagtccgtccacctcgtcatggagctctgcgccggcggcgagctcttcgaccggatcatcgccaagggccactacaccgagcgcgccgccgcctcgctcctccgcaccatcgtcgagatcatccacacctgccactccctcggcgtcatccaccgcgacctcaagcccgagaacttcctcctcctcagcaaggacgaggacgcccctctcaaggccaccgacttcggcctctccgtcttcttcaagcaaggagaggtgttcaaggacatcgtcggcagcgcgtactacatcgcgccggaggtgctgaagcggagctacggccccgaggcggacatctggagcgtcggcgtcatcctctacatcctcctctgcggtgttcctccattctgggctgaatcggagcatggcatcttcaattccatcctgagagggcaggtggacttcaccagtgacccatggccacgcatttcagctagcgccaaggaccttgtcaggaagatgctcaactccgaccccaagaagagaatttcagcctacgaagtcctcaatcacccgtggatcaaggaagatggagaagcacctgacacgccgcttgacaacgctgtcatgaacaggctcaagcagttcagggctatgaaccaattcaagaaagcagcgctaagggtcattgctggatgcttgtcggaggaagagatcagagggctgaaggagatgttcaagagcatggactctgacaacagcggcaccattaccgtcgatgagctgcgcaaagggctgtccaagcaagggaccaagctcacggaggccgaagtgcagcagctaatggaggctgccgacgcggacgggaacggaaccatcgattacgacgagttcatcacagcgacgatgcacatgaacaggatggacagagaggagcatctttacaccgcgtttcagtatttcgacaaggacaacagcggctgcatttcgaaggaggagctcgagcaagcgctgagggagaaaggtcttctcgatggcagagacatcaaagacatcatatcagaagtcgacgccgataacgatggaaggatagactacagcgagttcgcggcgatgatgcggaagggaaacccggaggccaatcccaagaagcgacgggacgttgtgatatag</cdnaseq>

Protein Sequence

<aaseq>MGNCCPGSGDAEPASSDASTGNGSSSFKAGASPSSAPAQNKPPA PIGPVLGRPMEDVRSIYTIGKELGRGQFGVTSLCTHKATGQKFACKTIAKRKLSTKED VEDVRREVQIMYHLAGQPNVVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTER AAASLLRTIVEIIHTCHSLGVIHRDLKPENFLLLSKDEDAPLKATDFGLSVFFKQGEV FKDIVGSAYYIAPEVLKRSYGPEADIWSVGVILYILLCGVPPFWAESEHGIFNSILRG QVDFTSDPWPRISASAKDLVRKMLNSDPKKRISAYEVLNHPWIKEDGEAPDTPLDNAV MNRLKQFRAMNQFKKAALRVIAGCLSEEEIRGLKEMFKSMDSDNSGTITVDELRKGLS KQGTKLTEAEVQQLMEAADADGNGTIDYDEFITATMHMNRMDREEHLYTAFQYFDKDN SGCISKEELEQALREKGLLDGRDIKDIISEVDADNDGRIDYSEFAAMMRKGNPEANPK KRRDVVI</aaseq>

Gene Sequence

<dnaseqindica>117..760#854..998#1093..1246#1338..1453#1567..1734#1856..1983#2077..2176#2298..2390#ttacggctccgcatcccccaccaccacacagacgcccaacgtgatcgacgcgcgcgcgctcccccgcggccgcgccgccgccgcgtgcccggctgtcgtcgtcgtcgcgcgccgccatgggcaactgctgtcctggctctggggatgcggagcccgcctcctccgacgcctccaccggcaacggctcgtcctccttcaaggccggcgcgtcgccgtcgtcggcgcccgcgcagaacaagccgccggcgcccatcgggcccgtgctcggccgccccatggaggacgtccggagcatctacaccatcggcaaggagctcgggcgcgggcagttcggcgtcacctccctgtgcacccacaaggcgacggggcagaagttcgcgtgcaagaccatcgccaagcggaagctgtccaccaaggaggacgtggaggacgtgcggcgggaggtgcagatcatgtaccacctcgccgggcagcccaacgtggtggagctcaagggcgcctacgaggacaagcagtccgtccacctcgtcatggagctctgcgccggcggcgagctcttcgaccggatcatcgccaagggccactacaccgagcgcgccgccgcctcgctcctccgcaccatcgtcgagatcatccacacctgccactccctcggcgtcatccaccgcgacctcaagcccgagaacttcctcctcctcagcaaggacgaggacgcccctctcaaggccaccgacttcggcctctccgtcttcttcaagcaaggcacgcacacctccattgaactctttccttcctctcctcaatggcgcatcgacctgaattgaattcatccgttgccgccattgttgattgcaggagaggtgttcaaggacatcgtcggcagcgcgtactacatcgcgccggaggtgctgaagcggagctacggccccgaggcggacatctggagcgtcggcgtcatcctctacatcctcctctgcggtgttcctccattctgggctggcaagtcatcttgatctttcctcccatccatttcgtcgaacacatcaacggcgatgtgatgactggaggagttaatcgatctctcatgtttcagaatcggagcatggcatcttcaattccatcctgagagggcaggtggacttcaccagtgacccatggccacgcatttcagctagcgccaaggaccttgtcaggaagatgctcaactccgaccccaagaagagaatttcagcctacgaagtcctcagtacgtgcctcttctggttctccattttgcatcgtttcatttgggatgtttgaaattttaactaacaatgcaatttttggttgttaattagatcacccgtggatcaaggaagatggagaagcacctgacacgccgcttgacaacgctgtcatgaacaggctcaagcagttcagggctatgaaccaattcaagaaagcagcgctaagggtctgtgattttgtttcccctttcagcaactacacttctgatctacgaacaacccacctcagcttcttgtttctcactgaatccgttggacaaaaaaaaatataaattaaaaggtcattgctggatgcttgtcggaggaagagatcagagggctgaaggagatgttcaagagcatggactctgacaacagcggcaccattaccgtcgatgagctgcgcaaagggctgtccaagcaagggaccaagctcacggaggccgaagtgcagcagctaatggaggctgtaagtgtgcacactctcttgggggctttggcttttctttgtatccgagttgtgatctgctacatggtataggtgcaatgcttaatcactgcaatgttaaattttgttgcgaaatattcaggccgacgcggacgggaacggaaccatcgattacgacgagttcatcacagcgacgatgcacatgaacaggatggacagagaggagcatctttacaccgcgtttcagtatttcgacaaggacaacagcgggtaactactgcagattctccaaaatttgatgcaaaaattacacaagagagcagtcaaattctttatttaagatctgtgcgtgtacctctgcagctgcatttcgaaggaggagctcgagcaagcgctgagggagaaaggtcttctcgatggcagagacatcaaagacatcatatcagaagtcgacgccgataacgtaaaatcgcagcagattcctttgctctacaaatcatttctaacattctacaacacgagtgacacggcaatgccaatgatcaatgtagagctgactaatttcgctggaattttacctgcaggatggaaggatagactacagcgagttcgcggcgatgatgcggaagggaaacccggaggccaatcccaagaagcgacgggacgttgtgatataggagaggagcttgacaacaaaacaaaaacatgatcttcatcatcgatcagttttggcatcgaaaaacatttgtcacgacaggttgcacacacacacacacactccagaggaattgcttgctgctgtttcatggcatggtattacatgcacctaaaatgatgaaattaattggaagggatggtgagcaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0808400, RefSeq:Os01g0808400