Os01g0810533

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Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0810533| Description = Protein kinase-like domain containing protein| Version = NM_001185684.1 GI:297720502 GeneID:9270191| Length = 5379 b...")
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Gene Name

Os01g0810533

Description

Protein kinase-like domain containing protein

Version

NM_001185684.1 GI:297720502 GeneID:9270191

Length

5379 bp

Definition

Oryza sativa Japonica Group Os01g0810533, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36184255..36189633

Sequence Coding Region

36184255..36184282,36184429..36184899,36185014..36185200,36185281..36185340,36185750..36185879
,36186073..36186308,36186392..36186490,36186652..36186716,36186804..36186869
,36186952..36187020,36187310..36187454,36188233..36188726,36188832..36189399
,36189627..36189633

Expression

GEO Profiles:Os01g0810533

Genome Context

<gbrowseImage1> name=NC_008394:36184255..36189633 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36184255..36189633 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcaggttcacaaacattgactgtggcttcgtagacggcgagagttacacggacagcacaacaaatttaacatacgtacctgatcatgaattcgttgaaggcggcacacaccatgaagttgtgccaaagctaattagtggatccaccgatgagcaagagaaaaccttgagaagcttccctgatggccaacgcaactgttacacaataccgtccactagtggtaagaagtatctcatcagaacaaccttcacttacggaaactacgatggactcaggtcgtcagagaacggttccttatttctgtttggactccacatcggcgtcaacttctggacaacggtgaacttgacaaaacaggactcatcagacactatctggaaagaggtgctcacggttgctccggacgagttcatatatgtgtgcctggtaaactttggatcaggaacccctttcatttctgcattggagttgcggcaattggatgatccaatgtacccattcctgaatctttttgtgtctgtaagctactttactcgaatgagatttggggcagtcgatgatttcatcacaagatatccaactgatctctttgatcgtttctgggaagcagcccaatgctactcctatccctggctcaacctgaccaccaaccaaacagtgaacaagctcccaggaaatgacaacttccaggtgccaacactcatcgtccagaaggcatccaccatcaacagcggtttttcatggctcaacatcagcataacggccggtgataacctgaatggccagagcctggagcttctcccgatcttccactttgctgagatagaaaagaaccgcccaaatcggacgttccaaatctatagtgatggcaacgagctgcaccaggccttctcaccgtcctacttgcaggtggacagcgtgtacctgagggaccggtacctacatgagtcaggtacaactttcaccctgtgcaagacaaacagctcggagctcccaccactcatcaacgcctttgaggcttactcgcttgttcggatggaaaacctcaccactgacaccatcgatgtcagttccatgaaacaagtaaagacgcagtacaatgtgcaacgaagaagttggaatggagatccatgttctccaaaagagtatacctgggaaggtgtgaaatgcaactactatgatggcaaacagaatcccaggatcatcctagtgaatttatctgcaagcagactgagtggttggataaatccatcgttcagaaacatgtcgctggaaatattggatctatcacacaacaacttgtcaggcactattccatataatcaagtaaactcactgaaatctctaaatctatcatataaccagctcattggatcggttcctgactatcttttcaaaagatataaagctgataaggcgaagaagaatacagcaacattgctcattgcagtgatagttcctgttgtagctattacacttatgttatttctatggatgctctgctgtaaaggaaaaccaaaagaacatgatgattatgatatgtatgaagaggaaaatcccctgcatagcgacaccagaagattcacatatacagagttgaggactataacgaacaacttccagtctatcattggaaatggaggatttggtacagtttatcatggcatattggggaatggagaggaagtcgcagtcaaggtgcttcgggagacatctagagccctatcaaaggacttcctccctgaggtgcaaacattgtcaaaagttcatcacaagaatctcgtcacatttttaggatattgcctaaacaagaaatgccttgcccttgtgtacgatttcatgtctagaggaaacttacaagaagttttaagaggaggacaagactacagtttgagctgggaagagcgacttcatattgcacttgatgcagcacaaggactggagtatctacatgaatcatgcaccccagcaattgttcacagagatgtaaaaacggcaaacatacttctcgatgagaatcttgtggccatgatatctgactttggtctttcacgatcttacactcccgcacacacacacatatcaactattgctgccggtactgttggctaccttgacccagagtaccatgctactttccaactcactgtgaaagcagatgtctacagttttggcattgtccttctagagatcattaccggccaaccttcggttttagtggacccagaaccagtgcatctaccaaactgggtacgccaaaagattgctagaggaagcattcatgatgctgtggacagtagactgatgcatcagtatgatgccacttctgtacagagtgtcatagaccttgccatgaactgtgtgggaaatgtgtccattgataggccgagcatgaccgaaattgttatcaagctcaaagagtgcttactggcaggtacaggtaaaaagcaactggtgtctggctcctataaacagaaggacgccatggacgctggcattgcaaggcagttccagctgctgatttctggagttccaatagtaagtaacgagtgtatatcaggtggcatcacagaattaagttattattcaggaagctcaaccgtggaacaagttggtgcctga</cdnaseq>

Protein Sequence

<aaseq>MIRFTNIDCGFVDGESYTDSTTNLTYVPDHEFVEGGTHHEVVPK LISGSTDEQEKTLRSFPDGQRNCYTIPSTSGKKYLIRTTFTYGNYDGLRSSENGSLFL FGLHIGVNFWTTVNLTKQDSSDTIWKEVLTVAPDEFIYVCLVNFGSGTPFISALELRQ LDDPMYPFLNLFVSVSYFTRMRFGAVDDFITRYPTDLFDRFWEAAQCYSYPWLNLTTN QTVNKLPGNDNFQVPTLIVQKASTINSGFSWLNISITAGDNLNGQSLELLPIFHFAEI EKNRPNRTFQIYSDGNELHQAFSPSYLQVDSVYLRDRYLHESGTTFTLCKTNSSELPP LINAFEAYSLVRMENLTTDTIDVSSMKQVKTQYNVQRRSWNGDPCSPKEYTWEGVKCN YYDGKQNPRIILVNLSASRLSGWINPSFRNMSLEILDLSHNNLSGTIPYNQVNSLKSL NLSYNQLIGSVPDYLFKRYKADKAKKNTATLLIAVIVPVVAITLMLFLWMLCCKGKPK EHDDYDMYEEENPLHSDTRRFTYTELRTITNNFQSIIGNGGFGTVYHGILGNGEEVAV KVLRETSRALSKDFLPEVQTLSKVHHKNLVTFLGYCLNKKCLALVYDFMSRGNLQEVL RGGQDYSLSWEERLHIALDAAQGLEYLHESCTPAIVHRDVKTANILLDENLVAMISDF GLSRSYTPAHTHISTIAAGTVGYLDPEYHATFQLTVKADVYSFGIVLLEIITGQPSVL VDPEPVHLPNWVRQKIARGSIHDAVDSRLMHQYDATSVQSVIDLAMNCVGNVSIDRPS MTEIVIKLKECLLAGTGKKQLVSGSYKQKDAMDAGIARQFQLLISGVPIVSNECISGG ITELSYYSGSSTVEQVGA</aaseq>

Gene Sequence

<dnaseqindica>5352..5379#4735..5205#4434..4620#4294..4353#3755..3884#3326..3561#3144..3242#2918..2982#2765..2830#2614..2682#2180..2324#908..1401#235..802#1..7#atgatcagtgagctgcactgtggagcagagatcccaaacgtgcaagtattgccctatatggtgttatgtatctatactcaactcattgttaagccgataaattggccataagcccatgaacagaatagttcatcttaacttacgttataagttccccagaagaaaacaacaaaaaaaagagtcaggcttaagttggtaccttaccctcacaagcatttctgtctgtatatgcagggttcacaaacattgactgtggcttcgtagacggcgagagttacacggacagcacaacaaatttaacatacgtacctgatcatgaattcgttgaaggcggcacacaccatgaagttgtgccaaagctaattagtggatccaccgatgagcaagagaaaaccttgagaagcttccctgatggccaacgcaactgttacacaataccgtccactagtggtaagaagtatctcatcagaacaaccttcacttacggaaactacgatggactcaggtcgtcagagaacggttccttatttctgtttggactccacatcggcgtcaacttctggacaacggtgaacttgacaaaacaggactcatcagacactatctggaaagaggtgctcacggttgctccggacgagttcatatatgtgtgcctggtaaactttggatcaggaacccctttcatttctgcattggagttgcggcaattggatgatccaatgtacccattcctgaatctttttgtgtctgtaagctactttactcgaatgagatttggggcagtcgatgatttcatcacaaggtgagatgaagattcttttttttctgtttcttttattataccatattgcaaccgtaggtgccctgtatcaattgcttctccatttatgttgccgtggtgatacagatatccaactgatctctttgatcgtttctgggaagcagcccaatgctactcctatccctggctcaacctgaccaccaaccaaacagtgaacaagctcccaggaaatgacaacttccaggtgccaacactcatcgtccagaaggcatccaccatcaacagcggtttttcatggctcaacatcagcataacggccggtgataacctgaatggccagagcctggagcttctcccgatcttccactttgctgagatagaaaagaaccgcccaaatcggacgttccaaatctatagtgatggcaacgagctgcaccaggccttctcaccgtcctacttgcaggtggacagcgtgtacctgagggaccggtacctacatgagtcaggtacaactttcaccctgtgcaagacaaacagctcggagctcccaccactcatcaacgcctttgaggcttactcgcttgttcggatggaaaacctcaccactgacaccatcgatggtaaacctgcgttacatcatggttttcagttcttgcttagcaatacagttaagataagagtatttgtattccattatatcatttacaacattatgctattagtagtattcaggtgtatacagatgggccatatattcatagttcgtttcctaaaaaatggagtatgtggaaatgaaaatttatgtttttattcttcacccttgttttttttcccacatgatctccaacaccccccccctaaataaataaataaataaaaataattcagcaatcgggcgtgcttgtgcagtaacctgctggcccagtttaattccatagagctatttgtagcatattgcacaggcctgttcctgccccatatccctttggactgaacttgagtattgttgaatttcggcccaacgaaagttgggactttcagccagtacatgctcacccaaaataggtgggtttgtggggattaggaggaagatgctctcctctcagtaacatactgacatgtggaacctggcaagaaagaggcttttcatgattgatctgtgacgcaatgacatgttctgtcatcgtcacacaaaagaaccattgacacatacaaaaaatcggactggattctgagttaaaaataatggttgaaaaacgaacagtcagtctggatttgaaagttaagtttttccttgaaacagttaggattggaaaattatttttcccttaaaaaaatcttcattatggagtactgatgcgcgcctattcttcatctattatgtttgttgttatgcagtcagttccatgaaacaagtaaagacgcagtacaatgtgcaacgaagaagttggaatggagatccatgttctccaaaagagtatacctgggaaggtgtgaaatgcaactactatgatggcaaacagaatcccaggatcatcctagtgtaagaatatcaataagcaagtcttgtaattcatgtttcgaaatgcagcagttcagcaccattgaaatttggatagcttgtattggataacctgcagttaaaaaatgttaaagaagacatatagcaatttacttaattgctggagacagcatccaaaaggttattctccattcgtttggatttttaatgaagaaggcacatgcatgtacaatttaaaacatgaagtgatatttgcagtcttgagaatataaaagtttttttactaacaggaactgagatgattttgcaggaatttatctgcaagcagactgagtggttggataaatccatcgttcagaaacatgtcgctggaaatattgtaagtgcaattcaaattttaaaatcacaaacaaacttaatttgcaaaacatggtgaaattgctatttatacaaaattacagggatctatcacacaacaacttgtcaggcactattccatataatcaagtaaactcactgaaatctctgtaagtatgtgcttattagaagttcagaaccatgctaaacctgagcctatagatcaattatttcaaattttgtgttctcatctgtagaaatctatcatataaccagctcattggatcggttcctgactatcttttcaaaagatataaagctggtttgcttgaactaaggtttggttgctgttctcgcattgtgctatactactatatttggcagatttcactttatcttataaattgattatttctgtcattagattagaaggaaatcccatgtgctcaaatataagtgaaagctactgtgccatgcaagcagataaggcgaagaagaatacagcaacattgctcattgcagtgatagttcctgttgtagctattacacttatgttatttctatggatgctctgctgtaaaggtgaaacaaaacagtgggttaaatccagatgtttgcgtgtatactgtagagaaaagcagattgaatcttgtgcaactttgcaggaaaaccaaaagaacatgatgattatgatatgtatgaagaggaaaatcccctgcatagcgacaccagaagattcacatatacagagttgaggactataacgaacaacttccagtctatcattggaaatggaggatttggtacagtttatcatggcatattggggaatggagaggaagtcgcagtcaaggtgcttcgggagacatctagagccctatcaaaggacttcctccctgaggtgaactatcagactacttaagtcagaacactccccctagaatgtaaagatgttatttgtggtcttgaataaaaatcaagctactagatgctagctatatctagaagtcatagttccacacattatttggatgtacactatttttatcgctttcaatgaaagcctgtttgtatgacatctgctgatgtttcaggtgcaaacattgtcaaaagttcatcacaagaatctcgtcacatttttaggatattgcctaaacaagaaatgccttgcccttgtgtacgatttcatgtctagaggaaacttacaagaagttttaagaggaggtttgcattcagtacagtaaaattaatgtcgttcaccctaaatgactcaaaattctaaagatagtacgtactccctccgtttcaggttataaaacgttttgactttggtcaaagtcaaactgtttcaagtttgactaagtttatagataaatatagtaatatttataatactaaattagtttcatcaaatcaataattgaatatatttccataataaatttgtcttgggttgaaaatgttactactttttttctataaacttgatcggagtatcagacttaaagtagtttgactttgaccaaagtcaaaacgtcttataacctaaaacggagggagtacaatatattacctttatatgtagcatgcccaatggtacttatgagtgtcaatttgttgcactttgaaacaggacaagactacagtttgagctgggaagagcgacttcatattgcacttgatgcagcacaaggtccacttaaatcctttaccctcttatagaaactaaacagcatagaagttggtaaacgtatgaaccttgatggactgcaggactggagtatctacatgaatcatgcaccccagcaattgttcacagagatgtaaaaacggcaaacatacttctcgatgagaatcttgtggccatgatatctgactttggtctttcacgatcttacactcccgcacacacacacatatcaactattgctgccggtactgttggctaccttgacccagagtgagttatccttaactgactgatattagatcaatatgcttcttctctggttcaagtcaagtgagtaatgtagattaaaaagaagctgactttaattatgttcttacatttcaggtaccatgctactttccaactcactgtgaaagcagatgtctacagttttggcattgtccttctagagatcattaccggccaaccttcggttttagtggacccagaaccagtgcatctaccaaactgggtacgccaaaagattgctagaggaagcattcatgatgctgtggacagtagactgatgcatcagtatgatgccacttctgtacagagtgtcatagaccttgccatgaactgtgtgggaaatgtgtccattgataggccgagcatgaccgaaattgttatcaagctcaaagagtgcttactggcaggtacaggtaaaaagcaactggtgtctggctcctataaacagaaggacgccatggacgctggcattgcaaggcagttccagctgctgatttctggagttccaatagtaagtaacgagtgtatatcaggtggcatcacagaattaagttattattcaggaaggtgagaagaaatgcttaatatgttattgttgcatctgcttgggcaaaaaaatgatgatctgcataaaagtggcatcgctttggggcagttttcatgcatatattgacctccttaattcctttgtcatttttttcttgttttactagctcaaccgtggaacaagttggtgcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0810533, RefSeq:Os01g0810533