Os01g0812100

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Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0812100| Description = Harpin-induced 1 domain containing protein| Version = NM_001051128.1 GI:115440626 GeneID:4327363| Length = 2031 bp| ...")
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Gene Name

Os01g0812100

Description

Harpin-induced 1 domain containing protein

Version

NM_001051128.1 GI:115440626 GeneID:4327363

Length

2031 bp

Definition

Oryza sativa Japonica Group Os01g0812100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36280345..36282375

Sequence Coding Region

36281196..36282134

Expression

GEO Profiles:Os01g0812100

Genome Context

<gbrowseImage1> name=NC_008394:36280345..36282375 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36280345..36282375 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgccgcacggccgcgtccacccggcggcggcggcgagcagctccgacttctccggcgagatgaaccagtccgccgcctcctccgacccctcctccagcccgccctacagcttccacttcgagaagcccctcccgccgacggcggcggcgccgccgcccgccgacgcgcggcggtaccagcagctgctgccggcgccgcagcccggcacgtacgtggtgcagatgcccaaggacaaggtgttccgcgtcccgccgccggagaacgcgcgcctcttccagcactacacccgccgcgccaggcgccgcgcccgctgctcctgcgcccgcgtctgctcgtggctcctcctcgcgctcgtcctcctcgccgccgcgctcgcggcctccgccgccgtcgtctacctcgtgttcaagcccaggcagccggactacacgctcctgtccctcgccgtgtccggcctcggcggcatcctcggcaacgcctcctccaccgctgcccctgcccccgtctcgttctcgccggagttcgacgccaccgtgcgcgcggacaacccgaacggcaagatcggcgtgcactacgagggcggcgggagccacgtcgccgtgtcgtacggcggcgtgaggctcgccgacggcgcgtggccggcgttctaccagggcccccgcaacgtgacggtgctggtggcgacggcgaaggggttggggatacggttctcggagcgcctgctcggcgacatcgcggcggcggggcggctccggtcggtgccgttcgacgtggacgtcaaggtgcccgtgcgcctgcaggtcggcggcgtgaggacgtgggccgtgccggtgagggtgcggtgcgcggtggtcgtggacaggctcgccgccgacgccaaggtggtgtccaagtcgtgccgcgtgaaggcgcggttcctcttctggaaggactga</cdnaseq>

Protein Sequence

<aaseq>MVPHGRVHPAAAASSSDFSGEMNQSAASSDPSSSPPYSFHFEKP LPPTAAAPPPADARRYQQLLPAPQPGTYVVQMPKDKVFRVPPPENARLFQHYTRRARR RARCSCARVCSWLLLALVLLAAALAASAAVVYLVFKPRQPDYTLLSLAVSGLGGILGN ASSTAAPAPVSFSPEFDATVRADNPNGKIGVHYEGGGSHVAVSYGGVRLADGAWPAFY QGPRNVTVLVATAKGLGIRFSERLLGDIAAAGRLRSVPFDVDVKVPVRLQVGGVRTWA VPVRVRCAVVVDRLAADAKVVSKSCRVKARFLFWKD</aaseq>

Gene Sequence

<dnaseqindica>852..1790#ctctctctctctccggcgtctgtcctgaccacctcgcacgtccgccgtctcctccttcctctcttcgcaatcacaatcctgaagaaattccggaacacatcgagatcgatcgaggagagaacgacgagcggtctcgtccagcaagctgtgcaaggtttggctttaattttttttcgttttttttggtctctacccgcttctgatttttctgatctgatttggcgccgttttttgaactttgggaatgtggttatgtactgcatatgtatatattggtttctcttgatcaaagctcgtgtttttggaatgttgggtaaaggtttttgtccagagctagagcatagagagtgttttgcttgcacactgtatatatgcatggccttaaattgcagtcgatcgatggcttgcatcaacagtcattttgagcaaaaaaactgcaggaactgaaatggtcaatctggaagtacaactatacagaaatgcacataattcacagattcggccttcgcaaaattcaatactcttatattgctgcgttttattggtggaaagaacatagacagtttgctttttttttttaaaaaaaaggagagctttaaattaaatcaatagttctggtttagattttttaggtgaaaactcttcgttgatattcctaaatggtactggtacagtattacatcgacggcctaaatttgatttgcactgacacccatcgcatcgacaccgttcgatatgaatcgatcactttagtatttttttaacaaaatttaatttatgactaattgagcttatgcatgcatgcataaaacgcgcagattgattcggacgcccgcctcgaggagcagccgatggtgccgcacggccgcgtccacccggcggcggcggcgagcagctccgacttctccggcgagatgaaccagtccgccgcctcctccgacccctcctccagcccgccctacagcttccacttcgagaagcccctcccgccgacggcggcggcgccgccgcccgccgacgcgcggcggtaccagcagctgctgccggcgccgcagcccggcacgtacgtggtgcagatgcccaaggacaaggtgttccgcgtcccgccgccggagaacgcgcgcctcttccagcactacacccgccgcgccaggcgccgcgcccgctgctcctgcgcccgcgtctgctcgtggctcctcctcgcgctcgtcctcctcgccgccgcgctcgcggcctccgccgccgtcgtctacctcgtgttcaagcccaggcagccggactacacgctcctgtccctcgccgtgtccggcctcggcggcatcctcggcaacgcctcctccaccgctgcccctgcccccgtctcgttctcgccggagttcgacgccaccgtgcgcgcggacaacccgaacggcaagatcggcgtgcactacgagggcggcgggagccacgtcgccgtgtcgtacggcggcgtgaggctcgccgacggcgcgtggccggcgttctaccagggcccccgcaacgtgacggtgctggtggcgacggcgaaggggttggggatacggttctcggagcgcctgctcggcgacatcgcggcggcggggcggctccggtcggtgccgttcgacgtggacgtcaaggtgcccgtgcgcctgcaggtcggcggcgtgaggacgtgggccgtgccggtgagggtgcggtgcgcggtggtcgtggacaggctcgccgccgacgccaaggtggtgtccaagtcgtgccgcgtgaaggcgcggttcctcttctggaaggactgatgaggaagcaagaacagtggagtaatcggttgattaaattaggagaagaagaacatgcagttttttggcaccaatggattcttgctgtgctttttcaatgatgttttactgtaatcatcatctgttcgtgggtttgatagagtaatgttgatcatcctaatgccaaaatcgtgttgtagttgtgatgttcatgagttgcacctatgtgttctttacaaatgagaagaaaaaagtttttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0812100, RefSeq:Os01g0812100