Os01g0814000

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Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0814000| Description = Conserved hypothetical protein| Version = NM_001051138.1 GI:115440646 GeneID:4327595| Length = 3672 bp| Definition ...")
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Gene Name

Os01g0814000

Description

Conserved hypothetical protein

Version

NM_001051138.1 GI:115440646 GeneID:4327595

Length

3672 bp

Definition

Oryza sativa Japonica Group Os01g0814000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36376080..36379751

Sequence Coding Region

36376118..36376663,36377369..36377558,36377852..36377960,36378410..36378500,36378602..36378664
,36378894..36379496

Expression

GEO Profiles:Os01g0814000

Genome Context

<gbrowseImage1> name=NC_008394:36376080..36379751 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36376080..36379751 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgccccttccaccctccccgccccaacgccggccaaccccaccgcccgcgccccggcgaccccgccccgcctcccctccccatgcacccgggcttcaaccctccgcccgtccccaacctcgccgccgccaaccccatggccgccgcggcggcggccaaccctttcctcgcgatgcagctcttcggccaggcgcagcagctccagagcctcggcttcctcgccgccgccgcgctccagcagcaccatcaccagccgcagccgcaggcccccttcttccccgggggaggtttcccgccgaaccccaaccagttcggggccttccctgtccagcacgccgggttcaacggcggcggggcgtttcgacctggtggcgtgggcgtgggcgtggccggcccccgtactccccgcccgatgatgggcgcccctggtaatggttacaacagcggtggcggcagcggccatggtaccggagctggtgcgccgagacccatgctgaatggtggggggaacgatcggaatagcagtgctgggaagggcggtgaggtaaaccacactaagatcaagccagatggcatccctcgttttacctctgaaaatggtgagaggaaaaatacaacagatcagaaagcccgattcaactctggaagagattgtagggatagcaggcaatttggcccatctggtggaaggggaaggggaaggggaaggtctttcaatcaaggtcgtggaggaggaaacaacaactggagagatgcaaaatccaacttcagaagcagtgacagtccaagtccagcatcaggacaacgccgcaatgacagtccagcatctggaggacaccggaagcggcctcgtataatttatgatgcaaacgaagttaaacagtggcttgaagcacgcaagaagaactatcctacaagtgtcaacataaataagaagttgtctgagagtcgaccagatggtgagaagaaggatgaagaggcccaaatgcgccgtcaggaactcaaggaagtattagaaaaacagaaagaattgggttttgaactccctgaactaccacctggctatctatctgaacatgaggatcaaggcaatggtaggagaagtaactggaaaacacaacgcagggattgtcgttttggaaaccgtgctgataacaaaagatcaaggtatgaccgcaatgattttcagtctaagagacccaaggtacggaaccaaactcattgtgatgatggggcagtgctcaagagcagggagccaaccctcttgcagaaacttcttagttcggatgtcaagagggacaggcataggcttctccacacgttcaaattcatggtccttaacaatttcttcagtgattatcctgataagcccttggagtttcctagtgttaaagtaaaccagatcgaacttgaaagcaacattgctgaagaggacctagatgacttgatgaacagcgagacggcaaaggacagcatccttgatttgaaggaaaatggtgatcagaaagactcgagctcaattgatggagaatcagacctcgatgacgacaatgatgatgaagatgaagaagatgatgatgatggcaatggccagtgctga</cdnaseq>

Protein Sequence

<aaseq>MRPFHPPRPNAGQPHRPRPGDPAPPPLPMHPGFNPPPVPNLAAA NPMAAAAAANPFLAMQLFGQAQQLQSLGFLAAAALQQHHHQPQPQAPFFPGGGFPPNP NQFGAFPVQHAGFNGGGAFRPGGVGVGVAGPRTPRPMMGAPGNGYNSGGGSGHGTGAG APRPMLNGGGNDRNSSAGKGGEVNHTKIKPDGIPRFTSENGERKNTTDQKARFNSGRD CRDSRQFGPSGGRGRGRGRSFNQGRGGGNNNWRDAKSNFRSSDSPSPASGQRRNDSPA SGGHRKRPRIIYDANEVKQWLEARKKNYPTSVNINKKLSESRPDGEKKDEEAQMRRQE LKEVLEKQKELGFELPELPPGYLSEHEDQGNGRRSNWKTQRRDCRFGNRADNKRSRYD RNDFQSKRPKVRNQTHCDDGAVLKSREPTLLQKLLSSDVKRDRHRLLHTFKFMVLNNF FSDYPDKPLEFPSVKVNQIELESNIAEEDLDDLMNSETAKDSILDLKENGDQKDSSSI DGESDLDDDNDDEDEEDDDDGNGQC</aaseq>

Gene Sequence

<dnaseqindica>39..584#1290..1479#1773..1881#2331..2421#2523..2585#2815..3417#accccgcttcctcctcccaacccctccccgacgccaccatgcgccccttccaccctccccgccccaacgccggccaaccccaccgcccgcgccccggcgaccccgccccgcctcccctccccatgcacccgggcttcaaccctccgcccgtccccaacctcgccgccgccaaccccatggccgccgcggcggcggccaaccctttcctcgcgatgcagctcttcggccaggcgcagcagctccagagcctcggcttcctcgccgccgccgcgctccagcagcaccatcaccagccgcagccgcaggcccccttcttccccgggggaggtttcccgccgaaccccaaccagttcggggccttccctgtccagcacgccgggttcaacggcggcggggcgtttcgacctggtggcgtgggcgtgggcgtggccggcccccgtactccccgcccgatgatgggcgcccctggtaatggttacaacagcggtggcggcagcggccatggtaccggagctggtgcgccgagacccatgctgaatggtggggggaacgatcggaatagcagtgctgggaagggcggtgaggtgaggaattattttgctgttgtgtattgaaatcgatagattgtctatgaacgaaaagtagtcttttagcctatacgatcattagggactgtgcaattcttatattgaggaaatatccacaattgcatattttaccagtatatatgtcatgcgatcatatcttgctgatattttttttcctggtgggttcatgggtattagtaagaccagttaagatcaacccatattatgtggtcagaagtatgatgtctcggtctctcagacttttagtacgcaaacgactcttgactacatctggatagtgtatgttcagcatgaaagatataactgaatttacttgtcatgctctctgtttctaacaattgcctgacctgatctatgatgagcacatgtcggctcgattccaaatgaccttctgttcttttctgcaatgttcgttgaacctttttgtactatatctgcaagttttgctcgtgcttctttatattttttcatattgatgtgcgtgaaatgttacctactaggttctttcggcatactatgactgagctattaggaaccgattagataatggccatatcatcagtaaaatctcatggatagacatggttttgcacctcattgtttattgcaattgtgtttcgttattgtacctattcaggtttggcttagcattgtattccaatttctgtttctctgcaacaggtaaaccacactaagatcaagccagatggcatccctcgttttacctctgaaaatggtgagaggaaaaatacaacagatcagaaagcccgattcaactctggaagagattgtagggatagcaggcaatttggcccatctggtggaaggggaaggggaaggggaaggtctttcaatcaaggtcgtggaggaggtagtgaatattgtatatatgccatatggttaagcatataggcaatacattgtatcaccttttgcttttggggacgcatactccttactgttgtcaagtgagcatgcagcatttcatgttttacttatcttgtttttatttgctgcaatggtttcataactctgtattattgaattgtgcacatgttttgatcatcttagctgcatgcaggataatgaatgcctttaatacatcatacctacaagattatcagtatttccagctaactgctgaattgatgtatcgcctgtcaggaaacaacaactggagagatgcaaaatccaacttcagaagcagtgacagtccaagtccagcatcaggacaacgccgcaatgacagtccagcatctggaggacaccggaagtatgtatactggacactagtttttttaattaaaaatattattgtaattggtaatctttttatgtgccttagatggtcacaattctggtttatctgtaataatgattatttagttattgcttctcccactcgtagcgctgaccgctaattattgcgtgtcaacaatgcattgctcaactagtacgcttatatttctgttccatctaacgagctgctgttctacatttctaaaccatgtcgatggtttccagaaaaaaaaagagttaattcagtgtgtaaatctagggaggaaacccatttactaaattacagggttgtacagaatgtcgtaaactttatggtcctttattacctgttagttgtggttttctggttcttgtcttgattttttttaaaaaatattcatggagtagtgatgtttttagtgtcaattgagtttgttcctgcaggcggcctcgtataatttatgatgcaaacgaagttaaacagtggcttgaagcacgcaagaagaactatcctacaagtgtcaacataaataaggtcaatgtttgtctttaaatacctctttttattaggcctcagcaactttatgtccacatcagactatcagagaagcatcatcaactgaccacttaatgcagaagttgtctgagagtcgaccagatggtgagaagaaggatgaagaggcccaaatgcgccgtcaggtaaagcaatctattgctatgattcatcatgcatcttctttaggttcaaagggagagggggttgatctagctttgaatggttctataagtacattttttttaacaaactaaatagaagcttttgccacagtattctgattgtgaacttttggggatgaattatttatgttggcaaatgtaagttgctcatgctcttacgtgtgattgttcattctcttgtgtatttcaggaactcaaggaagtattagaaaaacagaaagaattgggttttgaactccctgaactaccacctggctatctatctgaacatgaggatcaaggcaatggtaggagaagtaactggaaaacacaacgcagggattgtcgttttggaaaccgtgctgataacaaaagatcaaggtatgaccgcaatgattttcagtctaagagacccaaggtacggaaccaaactcattgtgatgatggggcagtgctcaagagcagggagccaaccctcttgcagaaacttcttagttcggatgtcaagagggacaggcataggcttctccacacgttcaaattcatggtccttaacaatttcttcagtgattatcctgataagcccttggagtttcctagtgttaaagtaaaccagatcgaacttgaaagcaacattgctgaagaggacctagatgacttgatgaacagcgagacggcaaaggacagcatccttgatttgaaggaaaatggtgatcagaaagactcgagctcaattgatggagaatcagacctcgatgacgacaatgatgatgaagatgaagaagatgatgatgatggcaatggccagtgctgagagcagcgacaaggatgagaacgaggacgtcgatgcagggcagatgtaatacgccgtttttttaaaacatgatggaagtaaacgactccagacgtctacacccaaaggtatactcaaccaaaatgtaatgcacctgaagtcagaggtgcaagtatccagcagggcacaggccaactgtgtttttggtgtatagttggcgttcacaaatgatatttatgtagctgcctttgaaattttgttatcagttgcatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0814000, RefSeq:Os01g0814000