Os01g0814200

From RiceWiki
Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0814200| Description = Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein)...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0814200

Description

Similar to Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC 3.1.3.56) (Cotyledon vascular pattern 2 protein)

Version

NM_001185692.1 GI:297720518 GeneID:9268288

Length

5638 bp

Definition

Oryza sativa Japonica Group Os01g0814200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36385415..36391052

Sequence Coding Region

36386480..36386717,36387177..36387325,36387605..36387660,36387803..36387872

Expression

GEO Profiles:Os01g0814200

Genome Context

<gbrowseImage1> name=NC_008394:36385415..36391052 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36385415..36391052 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcttacactgttttcaaggatttgcaggagaggtgtgcgaaaaatcccagagaaaattcttgagcatgaataccaaaaattttttgatggaaaataattgggatgttctctttgaaagggatcagctcaaaatcgaacgtgatgctgggagagtatttaaggggtggaatgaggggaagattttttttgctccaacatacaaatactcctataactcagatgcttatgctagtgagactgcaacatcaaataaaaagaggagaacaccagcatggtgtgatagaatattgtggcgcggggatggtattttgcaactatcctactaccgtggggagtctagattttccgaccatcggcctgtttgtgggaccttcattgttgaagttgaggtactaaacagaaaggcaaagatgcggccatcaaatgctaacatgaaaatcggagctgaagagctcttaccacagggaaacaataagggtaaaggtacaactcttcttgctcacatgccgtga</cdnaseq>

Protein Sequence

<aaseq>GLHCFQGFAGEVCEKSQRKFLSMNTKNFLMENNWDVLFERDQLK IERDAGRVFKGWNEGKIFFAPTYKYSYNSDAYASETATSNKKRRTPAWCDRILWRGDG ILQLSYYRGESRFSDHRPVCGTFIVEVEVLNRKAKMRPSNANMKIGAEELLPQGNNKG KGTTLLAHMP</aaseq>

Gene Sequence

<dnaseqindica>4336..4573#3728..3876#3393..3448#3181..3250#gtcgcggagccgtgcggggtccccctcgccctcgccccaatggccgtgcattcctcggccgcctccgacctcttgccgggatccccgggtggatggtagcaggggtggaggtaggaggaagggcgcgcgctcctggctgtctggctgcggtgcgggcaggggcatcggtagctgcggtgctgctcccttggggggtgggtttgggtggtttttggatcgtgggggagaggagccgaggtgggtatatcttctgttgcattgcattgtgtgcgtttgggattgttgcactggagagtaggtttggggggattcaagattgcatcgtcgtgtgacgtggcgtgtggtttttgaagaacttcggtttcattcagttgtgaaggttggtgtgtgtgctctcgtgttgtttctttctttgtatagcgggtgatatatggatcgtccattcattctattttagttctttttactgctagtacaggagtaaatttgtgtttgctaactttgatttccaaaaatgagaccaagactgaagtttggatttttatgacttgtttagtgttcaacttaaccgctttctcgctacgcttttttttttcaattactgcatggttcatctttgaattgtccatttggtggcattttacttatatatgaaaactatgatgtactgcttgcagattctttgtgatgcactgggctcgtgttcatacttcaaactgacaaacaaaaaaggttctttaaccggcttcagcgattaatggccttcactggggaggaaaaaatgaaggtgacttgctaattacatttccacggttgctttatgtatagaaatgaaatactcgccttcagaaaataggattgtgttccagggttgtcgcccaaaacttttcggagcaaaggagaataaagtctcaaacagaacagacaaaccaagttgcaacaccggttggttcagatcttcccttttaaaaagtttctgttccctttttgtttcattttggatcgttgttttaatggcgttggcagttaggcttatgtattcaaatatcctttttcttaatgcaatgatacacccatcttttgcatattcccgggaaaaaaaatgtatatacagtttcggatgctagttgaattgttccttatctttgccaattgaacatgattaggggttatttggatctccaattttaggaaaagtaaatttaattaagcaagttagcttgcctaaaagtctaatgccttgttggttaaacaagataagactaggatagcaaagttcatttgagttttaaagaaaacagctgcttcctgtttttttcacaaaattcaaaatatgaatatagtaaacaactagaagaaactttatatggcatcattttcatcagtgaatcccttcttgtggagggcaatcccttatttgccgttgtaaagttcatgcgatcccatgttagttatttgcaactgaagtttcattggcatgtgactgcatggcccatgtcagagagggagagagaaagatagacttcttcaattagataattccattaacgagtttccttttgccttgagatcatagaaggaactaactgtgttgtatggccttacataataacagggaagtttggtccaagttcttctaatgctgcgtcatcttcccccctaagggcattttcaggtacactaatatctagtaaatctggctaaatgtttggagatggcccaattttaattgttagtgggctttacttgtcttatgcttttgaactaaatggaacaagaagttaagggcatgcgtctcagtcatttcctggcgcaaactcctaataatacaacaactgagcccgtcaggtacaacaattcaaattccatatttgatcatgtgcccatcctctctatgccaactagatcaaattgtccaacttctgctttttattaaacagaatatttgttgccacctggaacgttggaggaaaagcacctacagctgagctgaacctggatgattttcttccccctgatgatcattcagatatttatgttttggggtgggtcttttattgcccttttcttaatatactagacgtggaaaatattttttttgtcaattttactaaattttctgttcatgttatccgactttctccatgtatgttaatttcttgaatgttggctttgacatataagactatactagtatttgatacatagctgaacgaggtaaagaaaggaagttccatgattcctctgtggtaaaaactgtcattgattttgtattcagatcagtgaatcatattttgctttgtagcttcaagttcacatctaatcaattctgtaacatttaaactttaaacagttttcaggaaattgttcctctcaatgctggcaatgtgcttgtaatagaagacaacgaaccagctgccagatggcttgttcttataaaccaagcattaaaccggccagctgaaaccaatgccaatgtctttcagaatgagccatctccctctgttgattctagtgtctctcgagcttcttcaagcctcgatacttcgttctctgacctagcaaaaacatcaagtagttccacaatcttccagaagtctaatctaaaatccattagaaaatccttcatgccagtccatcgaaaacggcttaaggcctgcaactgccctgtagagatggccaaatcatcctacagggatgcttgctttggttgccccaaagcatatgcttacgaaatagattcgtcagaagaggatgaacgggaagaaaagaaagggcaatcaagggattctaatggatctgtgcgcagtgaagtaatttctcctcccaccgcaagggatgaactaaaatataatcttatagcatgtaaacaaatggttggcatttttgtaatggtatgggtgaagaaggaactagtgcagcacattggtcatctaagaacgtcttgcatagggcgaggaattctgggttgtcttggaaacaaggtcagaagcaaagcataatatcagtttgaagtgcttttgtaagtactttttctgagtacacttcttctgcagggatgcatatcagtgagcatgacactgcaccagacaagcttttgtttcatctgcagccatttggcttcaggtcagaaagaaggtgatgaattccggaggaactctgatgttcttgagatactgaggcttacactgttttcaaggatttgcaggagaggtgtgcgaaaaatcccagagaaaattcttgagcatgagtaagaatgtgcttttagtgtgcttgtaattagtaaatatatgtatcttgtcaagcgtatatttctaagctatacgctgtttgtttcagtaaggtgatatggttcggagatctgaactatcgtatcgcactgagctatgcagataccaaaaattttttgatggaaaataattgggatgttctctttgaaagggatcaggtaacttccatttcttgttgcaggaaaatgatccattttttctggaatagcaatatcatgtacctgagaaacaattactatttcaaaacaatattataggaagcattttttccttagacaccattatggtactcctctgtgcttactggttttgaaatttaaaacaagtgaaatctgaaatatgcaaatcttttgatacttccattatattattgaaagctatttttcctctgcaaaatacttttttccccctcacttatgtcctgtataacactccagctcaaaatcgaacgtgatgctgggagagtatttaaggggtggaatgaggggaagattttttttgctccaacatacaaatactcctataactcagatgcttatgctagtgagactgcaacatcaaataaaaagaggagaacaccagcatggtatgcaccaattttagttggttttcaattatagtaaggctataatacagaaatgtattgattgtgctattcaattaattcattcaactgtatgtctaggagttgacttgatacaattaacatgtgttactattctggtctgatacaaaagtaagatgcaacactaattggcatgaaagaaacaaaattaaaaaataagtaaaattctgcatactatagttgtcatataatataacataaagtcactaatatatatacagaccaaactctatgcactgcatctgtaattagaggtaattcagtttatgatttggttgtatatttatatattagtaaattttccttttttaatttccagtaactataccatgaaagagtttctcgtgacttgtgaattatgaacatccgtttgcttgagtattgcgtagcgtccctcttaaatagtttggacttgctcaggtgtgatagaatattgtggcgcggggatggtattttgcaactatcctactaccgtggggagtctagattttccgaccatcggcctgtttgtgggaccttcattgttgaagttgaggtactaaacagaaaggcaaagatgcggccatcaaatgctaacatgaaaatcggagctgaagagctcttaccacagggaaacaataagggtaaaggtacaactcttcttgctcacatgccgtgatagttatctcataagcataattttagtactagctaaatacatgtgcttttaaaaaaatgtttcaaactttaaagaagtgtataatttttaattgaacatcaattcacaaataaaaccacatgcgcaaatgacacaactatccatgtaagattttcaaatgataaaaacacgtacgtgccgcaaaaaatccaatggtggtggtgctggacaatgtgagtcaccaagcaccaccggtaccatcactagcttcttttgtgattctgaagagaaaactgaaggactgttcatatgtcaaatcattaaaacttgaaagtaccttctcaggttgtatcagacctgcaggcatctactattgttggttcatcactccaggtttaaagtgggtttggtcgttcagaaactaaaaccagttgtactgagaatcaggactgaattcatttagttcaatttctgctaagatctctctcttctggcttaatggtttgaaatctaaaaagaaaaaagctgtcatatatatattgaatcacactgaagcgtgaggattgattgctatattcgtaatttcatcttgcaggttcatcacgaagcatgaactctccaaaaatatcgtaataacctgcagaagtcagacagtttcgtttttgagtcattagcactcaggagtcaagatgtactctttggccctgtttggatgagtggtagataaatcctcctcctaacaggctcttggagtgcctgttatacatacgccttggaaggaaggtgatgattaaatttgtgcagcaaatttagttattctttccaacgaaatggttggatacatattcgacgagttgcttaccagtttactacccaaatactcctaacctagactccttgttggtagggcaaaaatgcagagtgtttttttttccctttgcaaaggttactgagtactgaccctgatgtaggcctgctttggtagtttgaggttatttacatggaagaaaaaaaatgtactgatgaacgtaatgttcacaacggttcttctcctttgtgtagattcgatctggtgcagctttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0814200, RefSeq:Os01g0814200