Os01g0817400

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Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0817400| Description = Sodium/hydrogen exchanger family protein| Version = NM_001051158.2 GI:297597858 GeneID:4327491| Length = 3092 bp| D...")
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Gene Name

Os01g0817400

Description

Sodium/hydrogen exchanger family protein

Version

NM_001051158.2 GI:297597858 GeneID:4327491

Length

3092 bp

Definition

Oryza sativa Japonica Group Os01g0817400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36544299..36547390

Sequence Coding Region

36544387..36544659,36544756..36545754,36545840..36546286

Expression

GEO Profiles:Os01g0817400

Genome Context

<gbrowseImage1> name=NC_008394:36544299..36547390 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36544299..36547390 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgacggtaccggccctgatcgccgacgacctgccgacgaacgtgacgtcgcagatcaccgatgcggcgcgccccaagaccaccagctcggtggtctgctactccccgatgatgatcaccaccaacggcatctggcagggcgtcaacccgctcgagttctccctccctctcttcatcctccaggtcgccgtcatcgtcgtcaccacccgcctcctcgtcgtcctcctcaagcccttccgccaaccccgcgtcatcgctgaaatcctcgccggggtggtgctcgggccgtcggtgatggggcaggtggaagtctgggcgaccatggtgttcccgcagcgcagcctgctgacgctggagacggtggcgcacctcgggctgctctacttcctgttcctggtcgggctggagatggacctggacgtgatccggcggtcggggaagaaggcgctgttcgtcgccgtggccggcatggcgctgcccttctgcatcggcatcgccacgtccttcatcttccggcaccaggtgtcccggaacgtgcaccagacctccttcctgctcttcctcggcgtcgcgctctccgtcacggcgttcccggtgctcgcccgcatcctcgccgagatcaagctgctcaacacggagctcgggcggatcgccatgtcggccgccatcgtcaacgacatgtgcgcgtggatcctgctcgcgctcgccatcgccatctcggaggtgaacagcaccgcgctgtcgtcgctgtgggtgctcctcgccggcgtgctcttcgtgctcttctgcttctacgtcgtgcgccccgggatgtggtggctcatccgccgcatccccgagggcgaggtcgtcagcgacatgcaggtctccctcatcctcaccggcgtcatgctcgccggcgtgtgcaccgacgccattggcatccactcggtcttcggcgccttcgtctacgggcttgtcatcccgggcgggcagctcggcgtggcgctcatcgagaagctcgaggacttcgtcacgggtctcctcctcccgctcttcttcgccatcagtggcctccgcaccaacatctccaagatacgcgaccccatcaccgtcggcctgctcgtcctcgtgttcaccatggccagctttgccaagatcatgggcaccatcatcatcgccgcgctctacaccatgccgttccgcgagggcatcgcgctcggcttcctcatgaacaccaggggtctcgtcgagatgatcgtgctcaacatcggacgtgacaaggaggtgttggacgacgagtcgttcgcggtgatggtgctggtgtcggtggcgatgacgacgctggtgacgccggtggtgacgggggtgtaccggccgtcgcggcggctggtcgggtacaagcggcggaacctgcagcgcatcaggcacgacagcgagctccgcatgctgatctgcgtgcacaccacccgcaacgtgccgtcggtgctctcgctgctggagctctccaaccccaccaagcgctccccgatcttcatctacgcgctccacctcgtcgagctcaccggccgcgcctccaacatgctcgccgccgccgccgcgtcggcctcgaagcagaaccggagcagctcatcctccaccctgccccccgtcacggagcacatcttcaacgccttcgagaactacgagaggcacaccggtgagcatcgcaacgcacgccgcgcggttgcttga</cdnaseq>

Protein Sequence

<aaseq>MASTVPALIADDLPTNVTSQITDAARPKTTSSVVCYSPMMITTN GIWQGVNPLEFSLPLFILQVAVIVVTTRLLVVLLKPFRQPRVIAEILAGVVLGPSVMG QVEVWATMVFPQRSLLTLETVAHLGLLYFLFLVGLEMDLDVIRRSGKKALFVAVAGMA LPFCIGIATSFIFRHQVSRNVHQTSFLLFLGVALSVTAFPVLARILAEIKLLNTELGR IAMSAAIVNDMCAWILLALAIAISEVNSTALSSLWVLLAGVLFVLFCFYVVRPGMWWL IRRIPEGEVVSDMQVSLILTGVMLAGVCTDAIGIHSVFGAFVYGLVIPGGQLGVALIE KLEDFVTGLLLPLFFAISGLRTNISKIRDPITVGLLVLVFTMASFAKIMGTIIIAALY TMPFREGIALGFLMNTRGLVEMIVLNIGRDKEVLDDESFAVMVLVSVAMTTLVTPVVT GVYRPSRRLVGYKRRNLQRIRHDSELRMLICVHTTRNVPSVLSLLELSNPTKRSPIFI YALHLVELTGRASNMLAAAAASASKQNRSSSSSTLPPVTEHIFNAFENYERHTGEHRN ARRAVA</aaseq>

Gene Sequence

<dnaseqindica>89..361#458..1456#1542..1988#ctcccctgaaaccaacaccggcaaaacacaaagcaggggagccggtgaggggcccccgtgcgtgcgtgcggacgtgccatgcgccaagatggcctcgacggtaccggccctgatcgccgacgacctgccgacgaacgtgacgtcgcagatcaccgatgcggcgcgccccaagaccaccagctcggtggtctgctactccccgatgatgatcaccaccaacggcatctggcagggcgtcaacccgctcgagttctccctccctctcttcatcctccaggtcgccgtcatcgtcgtcaccacccgcctcctcgtcgtcctcctcaagcccttccgccaaccccgcgtcatcgctgaaatcctcgtaagtaaaagattaacgtgcccatcaatccctctcgtccatcagattcacggcgtgcatgcgatggcgatgaattcaccggcgttgtcagcgtaggccggggtggtgctcgggccgtcggtgatggggcaggtggaagtctgggcgaccatggtgttcccgcagcgcagcctgctgacgctggagacggtggcgcacctcgggctgctctacttcctgttcctggtcgggctggagatggacctggacgtgatccggcggtcggggaagaaggcgctgttcgtcgccgtggccggcatggcgctgcccttctgcatcggcatcgccacgtccttcatcttccggcaccaggtgtcccggaacgtgcaccagacctccttcctgctcttcctcggcgtcgcgctctccgtcacggcgttcccggtgctcgcccgcatcctcgccgagatcaagctgctcaacacggagctcgggcggatcgccatgtcggccgccatcgtcaacgacatgtgcgcgtggatcctgctcgcgctcgccatcgccatctcggaggtgaacagcaccgcgctgtcgtcgctgtgggtgctcctcgccggcgtgctcttcgtgctcttctgcttctacgtcgtgcgccccgggatgtggtggctcatccgccgcatccccgagggcgaggtcgtcagcgacatgcaggtctccctcatcctcaccggcgtcatgctcgccggcgtgtgcaccgacgccattggcatccactcggtcttcggcgccttcgtctacgggcttgtcatcccgggcgggcagctcggcgtggcgctcatcgagaagctcgaggacttcgtcacgggtctcctcctcccgctcttcttcgccatcagtggcctccgcaccaacatctccaagatacgcgaccccatcaccgtcggcctgctcgtcctcgtgttcaccatggccagctttgccaagatcatgggcaccatcatcatcgccgcgctctacaccatgccgttccgcgagggcatcgcgctcggcttcctcatgaacaccaggggtctcgtcgagatgatcgtgctcaacatcggacgtgacaaggaggtacaaaacacatactagtatttgacacacgttgatctcctcctcttctaagctccgtaatggccgccaatggcgttcgttgtaggtgttggacgacgagtcgttcgcggtgatggtgctggtgtcggtggcgatgacgacgctggtgacgccggtggtgacgggggtgtaccggccgtcgcggcggctggtcgggtacaagcggcggaacctgcagcgcatcaggcacgacagcgagctccgcatgctgatctgcgtgcacaccacccgcaacgtgccgtcggtgctctcgctgctggagctctccaaccccaccaagcgctccccgatcttcatctacgcgctccacctcgtcgagctcaccggccgcgcctccaacatgctcgccgccgccgccgcgtcggcctcgaagcagaaccggagcagctcatcctccaccctgccccccgtcacggagcacatcttcaacgccttcgagaactacgagaggcacaccggtgagcatcgcaacgcacgccgcgcggttgcttgagctgacacggggtgcttgtgtgacgcaggaggcatttccatccagacgctcgcggcggtgtcgccgtaccagaccatgcacgacgacgtgtccgtgctcgccgaggacaagcacgtctcgctgatcgtggtcccgttccacaagcagcagacggtggacggcgccatggagccgatcaacccgtccatccgcgggttcaacgagagcctcctctccacctcgccgtgctccgtcgccatcctcgtcgaccgcggcctcagcgccgccgcggcgcgcatggcggcgctgcaccgcgtggcgctcttcttcttcggcggccccgacgaccgcgaggcgctcgcgtacgcgtggaggatggtcgagcacccgggcgtcgccctcaccgtcgtacggttcgtcccgccggattaccgggtaaggtcctactccaacaccaactaccggtcggtcgcctccgacgccgacccgcgctcgatcggcatagacacggaaggcaagaccgagctgcagatggacgaggagtacctcggcgacttcaggacgcgcaacatcggcaacgacgccatctcgtactccgacaaggtggtggccaacagcgaggagacggtgtcggccatccggaacatggacgacagcctccacgagctgtacatcgtcgggaggcgccccggggaggccggctcgccgatgacggcgtcgctggaggactggatggagtgcccggagctggggcccatcggcgacatgctcgtgtcgtcggacttctcgatgtcggtgtcggtgctggtggtgcagcagtacgtggtggccgcggcggcgcccgcgcctgccaccaccgcgcctgccgggaacgccgatccggtgcgccagtacgtgagcaacgcaaaccagcggccgtccgcggcgtaccggacctcggcagcgtcgacggccaacagcagatggtccggtggtggcaccgtaggcttctgatgatttgatatgtgtacgttcctatagcttaagctgtgtgattgtagtagctgcttgttactcctccacggaacgtggaggaggagtttattttgttgtcttatcgatcagatagcatactgccagttactc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0817400, RefSeq:Os01g0817400