Os01g0817800

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Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0817800| Description = WD40-like domain containing protein| Version = NM_001051161.1 GI:115440692 GeneID:4327494| Length = 3906 bp| Defini...")
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Gene Name

Os01g0817800

Description

WD40-like domain containing protein

Version

NM_001051161.1 GI:115440692 GeneID:4327494

Length

3906 bp

Definition

Oryza sativa Japonica Group Os01g0817800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36564112..36568017

Sequence Coding Region

36564338..36564543,36565174..36565444,36565549..36565741,36566342..36566422,36566502..36566627
,36566707..36566857,36566934..36567078,36567676..36567867

Expression

GEO Profiles:Os01g0817800

Genome Context

<gbrowseImage1> name=NC_008394:36564112..36568017 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36564112..36568017 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgaggcgggtctccgcgaaccctcggccgtcctgcgtgcggagggtgctcgcgcggaagcggcggaggcccgaggcgacggcgaacagcgcgcggaagctgcagcggcgggagatctccgcgctgccgtgccgcgcgttctccgcgagcaccacgcgggagcggttccgcaacatccagctccaggaagagtttgatactcatgatcccaaggagatgggttcactactaccttacttgatgaaaaggtctgagattattgagatagttggagccagtgatatcatctttgctttatcacagtcaggagtatgtgctgcattcagcagagtctcaaaccagcggatttgctttctgaatggaagaccagatgaagtcattcgcagtttgttttacaacaagaacaatgactcactcattactgtatcagtttatggttctgaaaacttcagtgccttaagatgcaggacaactcgaatagagtatatacgacgggggaagccagatgctggtttccctcttttcgagacagagtccttgaaatggccaggttttgtggaatttgatgatgttaacgggaaggtgctgacttattctgcccaagacagtacttacaaggtgtttgacttgaaaaactacactttgttgtatacaatatctgataagaatgttcaagaaataaagatcagccctggcataatgctattgatatactcaagaaaaaagggctgtattccccttgacattctttctattgaagatggtaaacgcttgaagtcattcaaacaccttcttcatcgcaataaaaaagttgatttcattgagcaattcaatgaaaaacttctgatcaaacaggaaggggagaaccttcaaattcttgatgtaagaaacttccaatcaattgaagtaagcagaagtgaatttgtgactccttctgcgtttatctttctgtatgagatgcagctgttcctgaccttccgtagtagatcagtatccgtttggaatttccgtggtgaattagtcacatcttttgaggaccatatgttgtggcaccctgattgcaataccaacagtatttacatcaccagcaaccaagatcttattatttcttactgcaaggctgatccaaatgatccttcttcagaagaaaatgcttgctccataaatatcagtgagatcttaaccggaaaatgcttggccaaaataaaggcagggaaccttaacaagcaaagggtgtctaagttccaaagtacaccttccgaggcactgggggacatcacagctctgtactacgatgaagagcgtgaggagatatacaccggcaaccgactaggccttgtccatgtgtggtcaaattga</cdnaseq>

Protein Sequence

<aaseq>MEARRVSANPRPSCVRRVLARKRRRPEATANSARKLQRREISAL PCRAFSASTTRERFRNIQLQEEFDTHDPKEMGSLLPYLMKRSEIIEIVGASDIIFALS QSGVCAAFSRVSNQRICFLNGRPDEVIRSLFYNKNNDSLITVSVYGSENFSALRCRTT RIEYIRRGKPDAGFPLFETESLKWPGFVEFDDVNGKVLTYSAQDSTYKVFDLKNYTLL YTISDKNVQEIKISPGIMLLIYSRKKGCIPLDILSIEDGKRLKSFKHLLHRNKKVDFI EQFNEKLLIKQEGENLQILDVRNFQSIEVSRSEFVTPSAFIFLYEMQLFLTFRSRSVS VWNFRGELVTSFEDHMLWHPDCNTNSIYITSNQDLIISYCKADPNDPSSEENACSINI SEILTGKCLAKIKAGNLNKQRVSKFQSTPSEALGDITALYYDEEREEIYTGNRLGLVH VWSN</aaseq>

Gene Sequence

<dnaseqindica>3475..3680#2574..2844#2277..2469#1596..1676#1391..1516#1161..1311#940..1084#151..342#acgagaccgaggaggcgccagctcgactccgcgcgagccgaggcctcgaaccctaacccccattcgatttccggcgagatgcccacccgcgtctgagccttgctcgtcggcggcgaggtggggtggggcggggggcgggggcggcgagggatggaggcgaggcgggtctccgcgaaccctcggccgtcctgcgtgcggagggtgctcgcgcggaagcggcggaggcccgaggcgacggcgaacagcgcgcggaagctgcagcggcgggagatctccgcgctgccgtgccgcgcgttctccgcgagcaccacgcgggagcggttccgcaacatccagctccaggtcagccggcccgctcggcgcgtcccccctccccacaccctgtctcccagcatttaggtctggatcgatatggcgtagagggcaggagtgggtcggtaggttagggcttggagagaggataattgtttttttaaaaaatgattatttgaatgaatcaattgcgggaagagttggagcccgagagcatataggtagtgtgggtgttgtgaggaggaactttcgcctacggtcaaagaattcacgaggcgtaaatattccccaatgatggtgatagctttggctgtttgcggagagtttctccatcggatatcggaatccctggattagtacagctgttttagcattatggacgatgataggaagaggggaaaggtgtgtttggtgctatattttgagatgtggtcgctctctttggtatttactgtgataaaagtatactctggagcataactcggttggaaaaggttgaaacttcagtgcccttcatatcatagaacagccgatcttcaccaaaattttgtttctaacttttagttagcatgacctgttctttttacgattataacacatcttcaaattcttttcacttacaattaggaagagtttgatactcatgatcccaaggagatgggttcactactaccttacttgatgaaaaggtctgagattattgagatagttggagccagtgatatcatctttgctttatcacagtcaggagtatgtgctgcattcagcagaggtacaactttcgataatgattggtcatgtactgatgttataaattaccattgaattctgagatgtatttgttttagtctcaaaccagcggatttgctttctgaatggaagaccagatgaagtcattcgcagtttgttttacaacaagaacaatgactcactcattactgtatcagtttatggttctgaaaacttcagtgccttaagatgcaggacaactcgaatagagtaagcttgtcttcctgtgattctgctacggtagtgttatattgtttatatgaatctttttattattttgtcttttaaggtatatacgacgggggaagccagatgctggtttccctcttttcgagacagagtccttgaaatggccaggttttgtggaatttgatgatgttaacgggaaggtgctgacttattctgcccaagacaggtattctagctctaatttctttgaaggcgagaagattaacctcattcgaattgtgacattcctttctcattccaaccagtacttacaaggtgtttgacttgaaaaactacactttgttgtatacaatatctgataagaatgttcaagaaataaagatcaggtaagggaatctttcttgcttgctgatcatgattaagtttcacatttgtacaacctaaattatgctttgcctttttattcattggaagagatttttttaaaaaaattgatttgaagtgctatgcccccaaaacttcgaatatatttggtcaatggttaggagagctgcatgttttctatacaccttgcctgtgtttgatgggaaactaatggtgagcagttcataggcttttcttcaatgcactttgtgaaatgcttccctataggtgaacagaagttctgctaaaatgcaaaagctgaatagcatactttcaaaacaaacctttcggcctgattggcaactgttgattactaaaccgacaactttactgattgaacatttatgtaatttagctttgtggagagcatagaaatactattgccaattgagctatcatgggtttattcttggtgacctcctatatatggtgaattgattgctttttgtcaagtgagatgtggctggattgattgaaatttttgtatgtgtaacttatggaggtcatttccattttcgagcttccaaatttatacctttttgcttattgctaccttccaacagccctggcataatgctattgatatactcaagaaaaaagggctgtattccccttgacattctttctattgaagatggtaaacgcttgaagtcattcaaacaccttcttcatcgcaataaaaaagttgatttcattgagcaattcaatgaaaaacttctgatcaaacaggaaggggagaaccttcaaattcttgatgtaagtttttttcttggtatagattatggataacagcaaatgaaacaacacagtttcctctctttatttgtagaattgtagttaatttttgtgcaatgctgcaggtaagaaacttccaatcaattgaagtaagcagaagtgaatttgtgactccttctgcgtttatctttctgtatgagatgcagctgttcctgaccttccgtagtagatcagtatccgtttggaatttccgtggtgaattagtcacatcttttgaggaccatatgttgtggcaccctgattgcaataccaacagtatttacatcaccagcaaccaagatcttattatttcttactgcaaggctgatccaaatgatccttcttcagaagaaaatggtaataatcaaacttgtgttgcccgtgtgtttatttattagtgaagtgatgatagatctactgcctcttatatttggctggtttttggttgttgccatttcttgttattgcattcctctttgtcattctgatatactccctccatactcataaaggaagtcgtttagaacagcgacacggtctccaaaacacaactttgacttcttgtttctataaaaatatttattgaaaagtgatatatgtatacttttatgaaagtatttttcaagacaaatctattcatataatttttacattttcaaactcaacaacttaagagttatttatgatttatattcccaaggtttgacttaaaaatttgtcctaaacgacttcctttatgagtacggagtgagtatatcagctttgaatatcaataaaatataagaggcctcaaaaggttgacatactgatgcacttattatatactgtatcgttttaattattttttatgctcgtaaaatgtatgcttttcagacttgctgcagttgataagaaatttgtccttttcagacctactgcagtaggtaattgaggctgatgcatctattgtccccacataacatgatcttcactttggttcttttgcagcttgctccataaatatcagtgagatcttaaccggaaaatgcttggccaaaataaaggcagggaaccttaacaagcaaagggtgtctaagttccaaagtacaccttccgaggcactgggggacatcacagctctgtactacgatgaagagcgtgaggagatatacaccggcaaccgactaggccttgtccatgtgtggtcaaattgatagttgctcaggcagtcaagctttccttcgggcaacagcaatcctcacctagcgtggcataatcggggagatactagctacaaccgtagttcatcatcggggagatactagcgtgcctgatcggtgtagctccaagggtgtttactgtttaccatatgtatcgttttggaaggtttgtcactgttagcgtgccatcttaccccccgagctatatatatctgattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0817800, RefSeq:Os01g0817800