Os01g0819000

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Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0819000| Description = Conserved hypothetical protein| Version = NM_001051171.1 GI:115440712 GeneID:4327446| Length = 4293 bp| Definition ...")
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Gene Name

Os01g0819000

Description

Conserved hypothetical protein

Version

NM_001051171.1 GI:115440712 GeneID:4327446

Length

4293 bp

Definition

Oryza sativa Japonica Group Os01g0819000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36644207..36648499

Sequence Coding Region

36644575..36644621,36645520..36645640,36646567..36647721,36647839..36648255

Expression

GEO Profiles:Os01g0819000

Genome Context

<gbrowseImage1> name=NC_008394:36644207..36648499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36644207..36648499 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacttgctggacacggagatcgggaagcatgactacgactggcttctgactcccccaggatcacctcatgctcctatactggaggttgtggagaaagctccatcctcagatgtccctaaacgcattactactagatcatcctcaaccactagagcatcaaggctttccattcctgaaacagagaatgggcattccacagtaccaactaggccagcacggagtaactctgtctctcgcccttcaatccaatctactcttatttccagcaacaacaggtcatcagttgtcaatgcaagcatttcctctgtctgttcgccacctacaactccaagcaagaggactagcactctttcttcatcaaagccatcagttccagcttcacgtcaagtaccaacacggccctctactccaactaaaacccgtccatgtactccagtgaaacctcggccatctactccagtcaaacctcggccatctactccaaataaaactcggccttctactccagtcaaaactagatcttctgtacccaacactatgtccacctcaactattgccaaaacaacatctgcacaaaactcgagaccatcaactccaacctctcggcctcgtatcatgtccaattcatcttcaagtacaagttctgcagcaagtcgtcctagttcatcctctggaagaactagtacaattagtcgcacctcctcttccacaagtacagttccttcagtcagccgctctagctctcgttcatctacacctacgcgtcagcctatcacacgttcatcagccccactggctggccactcaccttctgttgggaggatatttggcagcaataacataacatccatcgggcggcctgtaaccagtaatggtcgaagttcagcaccttcttctgcaccatcatctcgtccaagttccccaaattcacgtgcacgagctccagtcaggccgttagatattcctgattttccaagtgaaactccaccaaacctaaggactaagctaccacaacgaccactatctgctggtagagcacgcccaggagtgggtttgggacccaagtcagccccaaatgctgaacaagttcgctcagctcctgtaaaaaagatgactgtgcctgctattacgcgaagtaaatttcctgatgcaccatctagggtatcttctcttacaaatggacaccaaagcagacagtccgaggggtctgctgtggaaggccaacatactaaaccattacggtctatcacgggcacagataatggctttggtaggacaatatcaaggaagtcacttgacatggcaatcaagcatatggacattcgacaaaacctgggtggtattcgtggtgcatctctattcccgcctagcattcgctctgccggtgcgaaggtccggtcagctcgaatgtctgatcccgctcatctcagtttaaatggcgattgtcattttactgacaatggcagcatcaatggacacttctctggagattcgaacggaactctttcaaacaacggtggcagctcaactggttctccagacagggaaagcattggaactaaggagacactgagtgaactagatctgtataccactgcacggtatgaggcattgttgttgagggaggacataacgaacacgaactggttgcacaacgttgatgacaaatctgaccagagcccagtgtttgatcaccggtttgagccgctcccagagccatttggtccactatga</cdnaseq>

Protein Sequence

<aaseq>MEDLLDTEIGKHDYDWLLTPPGSPHAPILEVVEKAPSSDVPKRI TTRSSSTTRASRLSIPETENGHSTVPTRPARSNSVSRPSIQSTLISSNNRSSVVNASI SSVCSPPTTPSKRTSTLSSSKPSVPASRQVPTRPSTPTKTRPCTPVKPRPSTPVKPRP STPNKTRPSTPVKTRSSVPNTMSTSTIAKTTSAQNSRPSTPTSRPRIMSNSSSSTSSA ASRPSSSSGRTSTISRTSSSTSTVPSVSRSSSRSSTPTRQPITRSSAPLAGHSPSVGR IFGSNNITSIGRPVTSNGRSSAPSSAPSSRPSSPNSRARAPVRPLDIPDFPSETPPNL RTKLPQRPLSAGRARPGVGLGPKSAPNAEQVRSAPVKKMTVPAITRSKFPDAPSRVSS LTNGHQSRQSEGSAVEGQHTKPLRSITGTDNGFGRTISRKSLDMAIKHMDIRQNLGGI RGASLFPPSIRSAGAKVRSARMSDPAHLSLNGDCHFTDNGSINGHFSGDSNGTLSNNG GSSTGSPDRESIGTKETLSELDLYTTARYEALLLREDITNTNWLHNVDDKSDQSPVFD HRFEPLPEPFGPL</aaseq>

Gene Sequence

<dnaseqindica>369..415#1314..1434#2361..3515#3633..4049#gtgtctgcctctctctctcgcgcgcgcagcctaccgccacaagcaaagtccaggagggctcgggcacggaagcttctggaagcttccgcgttggcgtgaggaaggaggcggaggggaggggagggggactgacctactccctcaccgcggtcgttccaagtcccgcgccgccggggattcccatcccctctcgcggcgcgccgcttcgacgggaggtagggagggtaggagcaagagcaacagagtgatgtcgagttcgggtggcttgcggttgttatcggtctcatccggttttgcggttgcaggcatcgtcgtatcgcatcgatctggtttggggggttttgggagtctgaagtggtgggtttgagatggaggacttgctggacacggagatcgggaagcatgactacgactggtaattgactggtttctccttacttatttggttttctgaattttgcgtcgatttcatgtttgctgcaattggtgaacccgttgtgctaagttgggtaagccgtttctctaatttggagtagctggtggcaatgccgcgtttgaaatttattttgggggcgttttattggttaaacttggacgacgttatacttatcgtgcttgtggttaggtgaatgaatggtgcttgtttatccgaggaatcagtggtgtcatcccagggaaatcatgatttggtgtatttaggttgagttctgctgactgcgattgtttccggttttaagattggccatgtacggatgctacttggtttagttagggaattagtttcgttgacagcaaagacaagtaggtgactgtattgtttggtctgtgggctccttcctagcttgaagagcaaagcgttggatctcaagtaatgtcttctctatattggaaagggaaaaaaattcggcaggcaaatagcattgctaactttaggatgttttatactggctcgtattataggataatttcaatagttcaaatgaattctataactcttttgtgaaatttctgaaactgaattacaccagcacccagccacccactgggaattacaatgaccagacattttaattgcaagtttagttgaaataactactgctacactttagttgactttcatcacattccactattgtggtgataaggccgatttggatgtcacgtctatgggcttgccacaaaacgggagtgcttcgtgtcaccaaaggatatgcctttccattatttatgtgtcatctgttctatgaccaagttatctaatttttattggtctgatcttctatgacttgcataacattggaatatttcttcaggcttctgactcccccaggatcacctcatgctcctatactggaggttgtggagaaagctccatcctcagatgtccctaaacgcattactactagatcatcctcaaccactagagcatcaagggttggtgctattttcttcaaattttttttacatgcaagtgtttcgagattctttttattcaagcagtcaggatatttgttccaagagcatagtagatgtttttttccttgtattgtattcaatgcctcattggcatttgaattcagccatccgggtcggttttcttgcataagaggataatgaagtaatataactctgaactggaaagtggaaatgatttttgatgtttgaaaaccctaccatgcattgcccaccaaaataaactagttgaaagaaaattatgttcgccagagtgattttccaaattttagaatgcacctagtcacattataattgcaataactgtttcagtgcacatcgcctgcattggtaggttgttaggtgctgcaactagcgctaagaacaatacttgtttgaattctgtttaggcaacaatagtagaaaggcatggtaatcctttaacttgcctttttattgacaactgaatgccaatcttacgtttcatgcaaaaggagttataagaaaaaggcttgatgaaccaggtgatctgtcaataccatcataggatgttgaaaacagatagtcaccaatgctaccgtgatttgctgtattattgggttgtaatcatgtaaatttggagtatttcacgttattacatgtttgctcatattcatatagtgcaaagtgtacaatctgcagtagtcagtaatacattttcgtctacaatgaattgtaatttgtttttgggaagcaatcaagttccatctagttagcaatataatattgtaataatattgcaccacttatcatataaccattgatacatgctttagctgtatgacctgtttcttcaaatctactatttgctcagccaggcatgtgttgatgctcataattaacagaaatgtgctgcatgtttattgcagctttccattcctgaaacagagaatgggcattccacagtaccaactaggccagcacggagtaactctgtctctcgcccttcaatccaatctactcttatttccagcaacaacaggtcatcagttgtcaatgcaagcatttcctctgtctgttcgccacctacaactccaagcaagaggactagcactctttcttcatcaaagccatcagttccagcttcacgtcaagtaccaacacggccctctactccaactaaaacccgtccatgtactccagtgaaacctcggccatctactccagtcaaacctcggccatctactccaaataaaactcggccttctactccagtcaaaactagatcttctgtacccaacactatgtccacctcaactattgccaaaacaacatctgcacaaaactcgagaccatcaactccaacctctcggcctcgtatcatgtccaattcatcttcaagtacaagttctgcagcaagtcgtcctagttcatcctctggaagaactagtacaattagtcgcacctcctcttccacaagtacagttccttcagtcagccgctctagctctcgttcatctacacctacgcgtcagcctatcacacgttcatcagccccactggctggccactcaccttctgttgggaggatatttggcagcaataacataacatccatcgggcggcctgtaaccagtaatggtcgaagttcagcaccttcttctgcaccatcatctcgtccaagttccccaaattcacgtgcacgagctccagtcaggccgttagatattcctgattttccaagtgaaactccaccaaacctaaggactaagctaccacaacgaccactatctgctggtagagcacgcccaggagtgggtttgggacccaagtcagccccaaatgctgaacaagttcgctcagctcctgtaaaaaagatgactgtgcctgctattacgcgaagtaaatttcctgatgcaccatctagggtatcttctcttacaaatggacaccaaagcagacagtccgaggggtctgctgtggaaggccaacatactaaaccattacggtctatcacgggcacagataatggctttggtaggacaatatcaaggaagtcacttgacatggcaatcaagcatatggtatgttacattcctcattttacgtgacagtaaacatgacctgcttacttttatttgatgtattttagttactgtaacatctccagaagaaactgaacagttcttgtctataaataggacattcgacaaaacctgggtggtattcgtggtgcatctctattcccgcctagcattcgctctgccggtgcgaaggtccggtcagctcgaatgtctgatcccgctcatctcagtttaaatggcgattgtcattttactgacaatggcagcatcaatggacacttctctggagattcgaacggaactctttcaaacaacggtggcagctcaactggttctccagacagggaaagcattggaactaaggagacactgagtgaactagatctgtataccactgcacggtatgaggcattgttgttgagggaggacataacgaacacgaactggttgcacaacgttgatgacaaatctgaccagagcccagtgtttgatcaccggtttgagccgctcccagagccatttggtccactatgatggttattagctgtaaaatctcgttcctcgttatgtttacaattagtagttgcaagttgtatgcggttatatctttctgtgtggttgtccatttcccccatcttttcatgaatcttctgaaagataagattgtggggtttatgttttgaagtagtactccataaatacctggagattcgattttgagttatcgctgtactgaaatccaagtgtcagagcacgatatagtttctctttttatccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0819000, RefSeq:Os01g0819000