Os01g0819700

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Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0819700| Description = Helix-turn-helix, Fis-type domain containing protein| Version = NM_001051177.1 GI:115440724 GeneID:4327604| Length =...")
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Gene Name

Os01g0819700

Description

Helix-turn-helix, Fis-type domain containing protein

Version

NM_001051177.1 GI:115440724 GeneID:4327604

Length

2309 bp

Definition

Oryza sativa Japonica Group Os01g0819700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36699675..36701983

Sequence Coding Region

36700326..36700443,36700547..36701832

Expression

GEO Profiles:Os01g0819700

Genome Context

<gbrowseImage1> name=NC_008394:36699675..36701983 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36699675..36701983 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagcgagcaggtgaagaggcggttcgggcggtgcccctactgccgcgccatgatctaccaggaccccaacgccatcatctactactgcagcaagtgccgcacgcccatccgaggcaagaacccggagccgacggacgacgccgagtacgcgctctcccagctcgagatcctctccgccgacaccgcctccgtgttctccgacgacccggacacgctgagccgcacgtcctccgtcgcatacggcggcggcgagcagcctccggtgcggaccagctcggctccctacgcagcatttgatcggggcagcgttagggctggttcaagaagcggcgagcaatcgggggaagagagaggtggctcgccgatgcacagccgcgtcagcgaactccggccgacgtcgcggagaaccaggcggccgatgagcggcgacatgggtgcgttcagggacgatggatcgagctatggttcggacaacgacgtcccgacgtctgccgccgcgagctaccgccgccgggcgtcgccgctgacctcccaggaactggaggcgtcgtcgtcgtcgatggggtcgtcgggataccaaccgtccggcgtgtcgtcgtcgtcgatggggtcgtcgtcggtgtacgaaccgtccggcgcggcgaggtcgccgctgacggacccggcgttccagagggacctgctgcaggcgctggacaacctccggagggtcatcgccgccgtcgagcagccgtacggcgtcgacgcgcacctgcaacaagccggaatgcccccgaagagcgcgtcctgcaacgacgccgccaccggcggcagcggcggcggcggcggcgcgtacgcagcagcagtcacgcggcgcaactcccgcctcatgcgccgcctcgagtcgcagctcgtgcaggcgctgcccagggacggcctgcgccgggacaggagcacctcctcctcctcgtcggcgtcgagcagccgcccgggcggcgaccgggccagggcggcggggcggaagcaccactgccgcgctgtgctgggcggcacgccgttcgtcgtctgcgacaagtgctcggagatactgcagctgccggccgccgtgtcggcgaacagggcggccaggctggagtgcggcggatgcggggagacgctgtccatcaagctgccggcggcggcggcggcggcggcgagcggctcgacggaccggcccaagaagatattctccgcgccgcagcccgccgttcgccggctggatgacgacgacgcgggggaggagcacgcgtccgcgaggagcaacctgagcggcgaccagcgatggccggcgtcgccggccgaagggccgctccaccgcatgctcgggtacagcacggtgagctcggttttccggagccggcggtacggagagcaacactga</cdnaseq>

Protein Sequence

<aaseq>MESEQVKRRFGRCPYCRAMIYQDPNAIIYYCSKCRTPIRGKNPE PTDDAEYALSQLEILSADTASVFSDDPDTLSRTSSVAYGGGEQPPVRTSSAPYAAFDR GSVRAGSRSGEQSGEERGGSPMHSRVSELRPTSRRTRRPMSGDMGAFRDDGSSYGSDN DVPTSAAASYRRRASPLTSQELEASSSSMGSSGYQPSGVSSSSMGSSSVYEPSGAARS PLTDPAFQRDLLQALDNLRRVIAAVEQPYGVDAHLQQAGMPPKSASCNDAATGGSGGG GGAYAAAVTRRNSRLMRRLESQLVQALPRDGLRRDRSTSSSSSASSSRPGGDRARAAG RKHHCRAVLGGTPFVVCDKCSEILQLPAAVSANRAARLECGGCGETLSIKLPAAAAAA ASGSTDRPKKIFSAPQPAVRRLDDDDAGEEHASARSNLSGDQRWPASPAEGPLHRMLG YSTVSSVFRSRRYGEQH</aaseq>

Gene Sequence

<dnaseqindica>652..769#873..2158#ctgaaaaagcggtgtgtatgtgtgctcagctgaggcgctgagcgctcggctcggcacacgtcttccgcatactaaaatcctattctttttgcttgcttggctcgttgctgtctccagaaaggaagagaccttttctgctcttgttcttcttccacggatcgatcgcctcgctcgctttcgcctgttgcttcacgtttcggaagagcttgggtttgggggaattcgtgtgatcgtgttgatgagtaggtgaagaattcgggaagagctttgagagttttggcatctgatctaggtaagttagttaatctgttcgtttctgtggtcttgtatgactcggttctttgcaatttctgcctaggagttcttgctcatgttcttgaattagccaggtaggaatgtaggttagggaggagattaggggataaccatcttgaattctagatgcaaatgagtttgataagttcagtagattcaccaatcgaacatggacacatagcgctgcaaaactgtagaacgcagaagaagcatggggattaagttcatggatgacaaatcttgaagctatcgtctctttgcagggcaaacgtgggcgtgggcgcgggcgcgtcgacggcgtcgtagcatcggcgacgtcgccggtcgccggcgagcatggagagcgagcaggtgaagaggcggttcgggcggtgcccctactgccgcgccatgatctaccaggaccccaacgccatcatctactactgcagcaagtgccgcacgcccatccgaggtacgcacgcacgccgcacgattcttcccggcgccgtcggccattgccggcgcgggtgtgttcctgagtacctgacgaggtgttcgatcgttggcttgagcaggcaagaacccggagccgacggacgacgccgagtacgcgctctcccagctcgagatcctctccgccgacaccgcctccgtgttctccgacgacccggacacgctgagccgcacgtcctccgtcgcatacggcggcggcgagcagcctccggtgcggaccagctcggctccctacgcagcatttgatcggggcagcgttagggctggttcaagaagcggcgagcaatcgggggaagagagaggtggctcgccgatgcacagccgcgtcagcgaactccggccgacgtcgcggagaaccaggcggccgatgagcggcgacatgggtgcgttcagggacgatggatcgagctatggttcggacaacgacgtcccgacgtctgccgccgcgagctaccgccgccgggcgtcgccgctgacctcccaggaactggaggcgtcgtcgtcgtcgatggggtcgtcgggataccaaccgtccggcgtgtcgtcgtcgtcgatggggtcgtcgtcggtgtacgaaccgtccggcgcggcgaggtcgccgctgacggacccggcgttccagagggacctgctgcaggcgctggacaacctccggagggtcatcgccgccgtcgagcagccgtacggcgtcgacgcgcacctgcaacaagccggaatgcccccgaagagcgcgtcctgcaacgacgccgccaccggcggcagcggcggcggcggcggcgcgtacgcagcagcagtcacgcggcgcaactcccgcctcatgcgccgcctcgagtcgcagctcgtgcaggcgctgcccagggacggcctgcgccgggacaggagcacctcctcctcctcgtcggcgtcgagcagccgcccgggcggcgaccgggccagggcggcggggcggaagcaccactgccgcgctgtgctgggcggcacgccgttcgtcgtctgcgacaagtgctcggagatactgcagctgccggccgccgtgtcggcgaacagggcggccaggctggagtgcggcggatgcggggagacgctgtccatcaagctgccggcggcggcggcggcggcggcgagcggctcgacggaccggcccaagaagatattctccgcgccgcagcccgccgttcgccggctggatgacgacgacgcgggggaggagcacgcgtccgcgaggagcaacctgagcggcgaccagcgatggccggcgtcgccggccgaagggccgctccaccgcatgctcgggtacagcacggtgagctcggttttccggagccggcggtacggagagcaacactgagctgagcattcttttgatttgattttttttttaattccctgtcctttttatcagatggcattgcaattttgatacacaattgcattgtaaaaattgtaaacgattcttcattctttttgtgtgtgtttcagtgtgtttgtttgattcatac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0819700, RefSeq:Os01g0819700