Os01g0822800

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0822800| Description = Similar to RING-H2 finger protein ATL3C| Version = NM_001051188.1 GI:115440746 GeneID:4327616| Length = 1362 bp| De...")
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Gene Name

Os01g0822800

Description

Similar to RING-H2 finger protein ATL3C

Version

NM_001051188.1 GI:115440746 GeneID:4327616

Length

1362 bp

Definition

Oryza sativa Japonica Group Os01g0822800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36877472..36878833

Sequence Coding Region

36877836..36878462

Expression

GEO Profiles:Os01g0822800

Genome Context

<gbrowseImage1> name=NC_008394:36877472..36878833 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36877472..36878833 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggtgcacacgaagtcgatgagctggtacatggggacgccggcctcgccgtcgccggggagcgccggggaggcgcagcacgcactgagcagcggcgggggagggggcagcgacgccagcttcgacaccaacatggtgatcatcctcgcggcgctgctcttcgcgctgctgttcgcgctcgggctcaactcgctcgcgcggctcatcatccggtgggcgcggcgggcggcgacgggggaaggcgccggcggcggcgtggagggggcgggcgccggcggcgggctcaagaagcgcgcgctcaggagcatccccatcgaggtgtacggcggaggtggtggagggagccccgccgccgcggcggaggtctgcgccatctgcctcggcgagttcgcggacggcgagaaggtgcgcgtgctgccgcgctgcggccatggcttccacgtccgctgcgtcgacacgtggctcgtctcccacgactcctgccccacgtgccggggctccgtcctccacggcgccaccaccaagcacaaaccaaccgccgccgccgccgccgcgggcagccggcggccggggagcgaggtcgacgcccccgccgccgccgccgtgacggtggtcatcgcgtga</cdnaseq>

Protein Sequence

<aaseq>MGVHTKSMSWYMGTPASPSPGSAGEAQHALSSGGGGGSDASFDT NMVIILAALLFALLFALGLNSLARLIIRWARRAATGEGAGGGVEGAGAGGGLKKRALR SIPIEVYGGGGGGSPAAAAEVCAICLGEFADGEKVRVLPRCGHGFHVRCVDTWLVSHD SCPTCRGSVLHGATTKHKPTAAAAAAGSRRPGSEVDAPAAAAVTVVIA</aaseq>

Gene Sequence

<dnaseqindica>372..998#gtctactgctactactactacggctcaactccacttgctgttgttgattctcctcctcctcctcatctcatctcccgaaatactaatccagctcgatcgtgtgggaaagagatcacagaaggtacttggctagctcactccatcaatcgatcgatcggtacagtttagcaacagttaagcttcacctttttgtattagctagtggcagtcgctactacgtccacgtccttttgtgttacggattggttcgcgagcgagataactggtgagtagtagtagcttttccactgacctggacctgtacattcggcgcataatttgccgggaagcttagcgtgttgttctaagttctagtaagttggggggaggccatgggggtgcacacgaagtcgatgagctggtacatggggacgccggcctcgccgtcgccggggagcgccggggaggcgcagcacgcactgagcagcggcgggggagggggcagcgacgccagcttcgacaccaacatggtgatcatcctcgcggcgctgctcttcgcgctgctgttcgcgctcgggctcaactcgctcgcgcggctcatcatccggtgggcgcggcgggcggcgacgggggaaggcgccggcggcggcgtggagggggcgggcgccggcggcgggctcaagaagcgcgcgctcaggagcatccccatcgaggtgtacggcggaggtggtggagggagccccgccgccgcggcggaggtctgcgccatctgcctcggcgagttcgcggacggcgagaaggtgcgcgtgctgccgcgctgcggccatggcttccacgtccgctgcgtcgacacgtggctcgtctcccacgactcctgccccacgtgccggggctccgtcctccacggcgccaccaccaagcacaaaccaaccgccgccgccgccgccgcgggcagccggcggccggggagcgaggtcgacgcccccgccgccgccgccgtgacggtggtcatcgcgtgaccggggcaggtgggcccccgcttcccccagccgctgtgggcccagtgtaacatacccatgtaaaaaatctcctttcttgttttggacctatgtaaaaaaatctctccttgggccaggccatggcccatggccgtgagatattttccgacgttggtgctgtgagaggatgacgggtgggcccgctcgtctgttcagtttgtaggttactcacagtagtccaccgtccattcgatttcgatcttggctagcaagggcagttgttgtggaggttaggaggtacaggacgcttacagttacgtacaggcttgtaatattaccgtataagtagtatcattttgcgaggaaataccgtatatttgttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0822800, RefSeq:Os01g0822800