Os01g0825800

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0825800| Description = Amino acid/polyamine transporter II family protein| Version = NM_001051207.1 GI:115440784 GeneID:4327515| Length = 6...")
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Gene Name

Os01g0825800

Description

Amino acid/polyamine transporter II family protein

Version

NM_001051207.1 GI:115440784 GeneID:4327515

Length

6152 bp

Definition

Oryza sativa Japonica Group Os01g0825800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37076860..37083011

Sequence Coding Region

37077042..37077191,37077284..37077750,37077829..37078032,37082323..37082475,37082589..37082985

Expression

GEO Profiles:Os01g0825800

Genome Context

<gbrowseImage1> name=NC_008394:37076860..37083011 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37076860..37083011 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgccgccggcgagcacgggcaagtgcaccggcgccgccgccggcgaggtggaggagccgctgctgccggagttctctggcggcgggcatggggcgtcggtctccggcgcggtgttcaacgtgtcgacgagcatcatcggcgccggaatcatgtcaatcccggcggcaatgcgggtgctcggtgtgctccccgcgctcctcctcatcgccaccgtcgccgcgctgtccgacgcctccgtggaattcatgctgcggtacacgggctgggacagcggcccgccgtcgtacgccgggatcatgggcgacgcgttcggccgcgccggcgccaaggcgctcaatgtctgcatcgccttcaccaccacgggcaccctcgtcgtctacctcatcatcatcggggatgtgctgtctgggagcgcaggagcaggagacgagcacgccggtgttctgcaggagctgttcggagcgcagtggtggacggcgagggagctcgtcatactggtcacggccatcgtcgttctgctcccgctcgtgctccgccgccgcgtcgattcactgaagttcacatcagccgtgtccatcctactggcagtggtgttcatgttcatcagcctgggcatcgcggtgtacgccctcttcaccggcacagcgaagatgccgcggatgctgccggatttctcgcgcctctcctctccgttcgagctcttcaccgccgtccccatagtcgtcgtcgccttcaccttccacttcaacgtgcacccgatccgaacggagctaagcaagacgtcggacatgaaggcggccgtgcgcatctccctcgtgctctgcgcggccatctacgcggcggtggggttcttcggcttcctcctcttcggcgacgccaccatggcggacgtgctcgccaacttcgaccgcagctccggcgccggggtcccgcaggcgctgaacgacgcggcgcgcctcagctacgcgctgcacctcgtgctcgtcttcccgctgctccacttctcgctccgcgtcaacgtcgacgagctcctgttcccggggcggcggccgctggccacggacacgcgccggttcgtggcgctcacggccgtgctcatggcggtgctctacgcgctcgccatcgccatccccagcatctggacgctcttcgagtactccgggtcaacattcgccgtctgcatctcgttgatcttccccggcgccatcgttctcagggatgctcatgggatagcaaagacgaaggacaaggcattggcagcgacgatgatcgctctggccgtgatcacgagcagcatcgccatcgcctccaacgtcatgagctccatcagcggcaaggtggaaggaggccatgccgcaggtaggtag</cdnaseq>

Protein Sequence

<aaseq>MTPPASTGKCTGAAAGEVEEPLLPEFSGGGHGASVSGAVFNVST SIIGAGIMSIPAAMRVLGVLPALLLIATVAALSDASVEFMLRYTGWDSGPPSYAGIMG DAFGRAGAKALNVCIAFTTTGTLVVYLIIIGDVLSGSAGAGDEHAGVLQELFGAQWWT ARELVILVTAIVVLLPLVLRRRVDSLKFTSAVSILLAVVFMFISLGIAVYALFTGTAK MPRMLPDFSRLSSPFELFTAVPIVVVAFTFHFNVHPIRTELSKTSDMKAAVRISLVLC AAIYAAVGFFGFLLFGDATMADVLANFDRSSGAGVPQALNDAARLSYALHLVLVFPLL HFSLRVNVDELLFPGRRPLATDTRRFVALTAVLMAVLYALAIAIPSIWTLFEYSGSTF AVCISLIFPGAIVLRDAHGIAKTKDKALAATMIALAVITSSIAIASNVMSSISGKVEG GHAAGR</aaseq>

Gene Sequence

<dnaseqindica>5821..5970#5262..5728#4980..5183#537..689#27..423#ccacacgcctgaaatccccaccgaaaatgacgccgccggcgagcacgggcaagtgcaccggcgccgccgccggcgaggtggaggagccgctgctgccggagttctctggcggcgggcatggggcgtcggtctccggcgcggtgttcaacgtgtcgacgagcatcatcggcgccggaatcatgtcaatcccggcggcaatgcgggtgctcggtgtgctccccgcgctcctcctcatcgccaccgtcgccgcgctgtccgacgcctccgtggaattcatgctgcggtacacgggctgggacagcggcccgccgtcgtacgccgggatcatgggcgacgcgttcggccgcgccggcgccaaggcgctcaatgtctgcatcgccttcaccaccacgggcaccctcgtcgtctacctcatcatcatcggtgagcccacgccgtcgaggacgcgctgctctgcagctctgggatacatccgaattgcatgcggggagaaaatattgaattaaccgcgtcgagcatcttggtcgccgtcgcaggggatgtgctgtctgggagcgcaggagcaggagacgagcacgccggtgttctgcaggagctgttcggagcgcagtggtggacggcgagggagctcgtcatactggtcacggccatcgtcgttctgctcccgctcgtgctccgccgccgcgtcggtgagttgctctcgaatacaacctgatgcacttaattagtatttattaattgctactctaaaatagcttgattagtttaattgctactctaaacgtacttcatccgtttcatactaaactaagaatatttttattcaaactttattaagtttaataaaatctatagaacaaatttgacaatatctaaaacatcaaattagtgttattgaatatattttgataatatatttgtttaatgttaaagatgctactatatatttttttataaagccaaaaacttatgacatagaaagtaattaagctagtgctgagttgtaaatttgagttctcgagcggtgttcgacacgagtagttgagccacccgaattatttgggacatggagatggagtggctcattgtggacgtcggattgcgctcgtgcacagggtttatctcagctaccgattgagtcctctaaacgctttaacaaaaatccaatttgtcgaactacggaaacagcacataatggtggtgatttttcctcgatttccattaccatgactaaacggtatattttatttaaaaaaattgaccaaatggtatattttgtgaaaaaaatttatgtagaagttatttaattaaaaaaattaaataaacctatttttaaatttataataattaaaagtcaagtaactatgtgctaatggctctctcattttacatgctctaactttatctttatagtagaaaatatgacacccacgttgacgtgtcaactatttagccagtgtgcgctagttagagttacttttagaatgcatgaaagacataatatattactccctccgtcctacaatagttgtcattctaggttgtttaggatagattaagatttaataaaaaactataataccccttattaaataatgtatggtggtaagtgaaatgattattgagggtaaaaagggaaaacttttgaatagaaagtgattgatgggacaacttagtactccatagtgaccagtattttgggacaaaatttaaatcctaaagagacaagtattctgggacggaggtagtattagccaaaaattgttgacgtgttttttttaacgatcgatttgtcagccatcagattcacgtcacgaatagcaaatgtgagttacatataaataactatattatagatacactacaattatactacaaccgcgtttgaaagtttagccctatatttgaaaggatattcttctatcaacaatcgttgtagcagagtcttgcacttatgaaaatgaaaaacatcatattttccatcaacgtcttttttaaaaaaaattcatagtttttcatcaaattcatgaaattcagaagatatacgtattagttaggtcatgaaggaatatacttatcatcgtactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaattacgtaattaaatcacacttaaaatactatgattgataaaacaactcatgataaaataaattataattatgtaaattttttgaataagacgaatagtcaaacatgtgaaaaaaaaagtcaacggtgtcatctattaaaaaaacggagagagtattagttaggtcatgaaggaatatacttatgatgatgttcttgctggatgaacacaacatccaccaatcgatatcctcttttactatttttctgatggaaagattaattgaaaggaggagaagaatggtttggaaggttctggatttggtctaataggataatctcttttttctagattttttatgaacggatttgctagtttactgtcgacagtaaacgaggggaaaaaatgtcgaatttttgactgtttttgtctgtcggattcgcctcaagattagtgctggcacgttcgtgtaaaaaatccatgcgataactaaatttgtgtgctgcatggggttcgaacctaggacctcaatcccactagctatgcgtggtagccacttcatctcattaaagttttctaaaaagtttgcaagttatagttagttatactccagttacaccctagttacattgtaactatattgttatctctatataaattatatataaagttgcatatattatttgaatacatatatacaagttattattattatatattattttaatacatatatacaagttattattattatagtatatagttctagtgaaattatatactgtagctagatttgaaaattttcccctaaaaaaacactcgacagttttttttagctaatcccttttatgaataacttggagatttatttaaaaaattactatgccacatggttgtggcacgagcgactagcagtaaaaaccatcagctttagtaagatagatagataggataatatatttttctcaaattttttataaataacttggagatttattttaaaagctactgtgccacgtgtggcgcgagcagctagtggtaaaaaccatcagcttggggctgtttggatggagctaaaatatttttagtccctgtcacatacgatgtttagatactaattagaaatattaaacgtagactaatgacaaaatacattccataaccctagattaattagcgagatgaatctattgagcctaattaatccataatgtgctaattatagattaattaggcttaaaaaattatctcgcgaattagcactcatttatgtaattagttttgtaagtagtatatgtttaatagactaaattagtatcaaatatctgatgtgacagagatttttagttcccagatctaaacaccctcttaaagtttagttcgtggatcaaacacctccttaataagatagctagatagtttctatttcatccatctgccgttgagtccggaaggccgaaagagcgttatcttgggcctcgatctcatgtggaccctgagacccatttacacatccctttcaaccatgtgcaccaaatgtgcaatattgccatagtgcccataaacaaggatatcattgcctcgtcggattgttgcacgcggaccacgaggctggcccagttgtcagccactcgcccaccagtccggactaaattaaaaaccctatcgtccttcgaagttcgcagcgccacgccacaataatttggtcgctgagctccgttcacccatctgactaggctcttatcacaagcacactcatcgcccctcctgtcgttttcccgcgccacgtttccacgctctcgagccgccgattccaaagaaacgcgcaccaaactctcgtctagctccccgcttaacgtatcaacaccatggtgtccaagaagacctccatcgccgccgccgccgccgccgccggcgacagcggggcagcagaaacgtccctgctgccagagcgttacgccggagcggggacgccagccgcagccgcgtcggtgctcggcgcggtgttcaacgtgtcgacgagcgtcgtgggcgccgggatcatgtcgatcccggcggccatgcgggtgctcggcgtggcgccgacggtggcgctcgtggtcggcgtcgcgctcctggccaacgccgccgtggacttcatgctccggtacacccgcgggccgtcgtcgtacgccgcgctgatgggcgacgcgttcggccgcgccggggccgcgctgctcaacgtcttcgtcgccttcaacgccatcgggaccctcaccgtgtacctcatcatcatcggtaacgcaccacagcatatctccccccgagccgtacacccagcgaacctgcagcgctggtcgccgcgtgcagacgagtgatatttccggggattttggtgtgagtgttcctgcaggcgacgtgatgtccggcacgacgagcgacgggaaggtgcacgacggggtgctgacggagtggttcgggcagcaatggtggacagggcgggaggcggtgctggtggcagccgcggtgctcctcctccctcttgtgctccggaagcgtgtcggtacgtaagggagcccgcgatgattgttgtttctcattaggaccgacgagcagactctagatccagtgccccaaactaaaccgcattttcagtcatttggtcgaattctaaattcccatttccggaccaatttccactacgatttggcaaaactggacggtgtcgtatagtagtatatgaattttgcaaggttagaatgccttatgaatttgggaggagctacgacatttgaaaaatacctgaataccgtagtccctgaagtcataccctttaatttgctgtgacctgtgactaattgcagattcactgaagttcacatcagccgtgtccatcctactggcagtggtgttcatgttcatcagcctgggcatcgcggtgtacgccctcttcaccggcacagcgaagatgccgcggatgctgccggatttctcgcgcctctcctctccgttcgagctcttcaccgccgtccccatagtcgtcgtcgccttcaccttccacttcaacggtatcacatcgatcgcgccattgttaacactacaccatctttttctcgagactgaattatctgccttgcatctggcagtgcacccgatccgaacggagctaagcaagacgtcggacatgaaggcggccgtgcgcatctccctcgtgctctgcgcggccatctacgcggcggtggggttcttcggcttcctcctcttcggcgacgccaccatggcggacgtgctcgccaacttcgaccgcagctccggcgccggggtcccgcaggcgctgaacgacgcggcgcgcctcagctacgcgctgcacctcgtgctcgtcttcccgctgctccacttctcgctccgcgtcaacgtcgacgagctcctgttcccggggcggcggccgctggccacggacacgcgccggttcgtggcgctcacggccgtgctcatggcggtgctctacgcgctcgccatcgccatccccagcatctggacgctcttcgagtactccgggtcaacattcgccgtctgcatctcgttgatcttccccggcgccatcgttctcaggcacgccatcagatcaccaccatggcatcatacaattctcatcgcttaacgcttggttacagttgtcatgtaatgctacaatttttttgcagggatgctcatgggatagcaaagacgaaggacaaggcattggcagcgacgatgatcgctctggccgtgatcacgagcagcatcgccatcgcctccaacgtcatgagctccatcagcggcaaggtggaaggaggccatgccgcaggtaggtagcatgtggtatattggtttgctgtccgacagcatcaagattcaaggctactgcccctgtagcgttcctctgttttacattttttttaaaaaaaaggaaaaaaaacttgcagggattgactcgtaacaatgtatacttgtgtgttgtaaggatttagcggcgagtcattgttgtatacttttac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0825800, RefSeq:Os01g0825800