Os01g0827200

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0827200| Description = Phox-like domain containing protein| Version = NM_001051213.1 GI:115440796 GeneID:4327521| Length = 3973 bp| Defini...")
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Gene Name

Os01g0827200

Description

Phox-like domain containing protein

Version

NM_001051213.1 GI:115440796 GeneID:4327521

Length

3973 bp

Definition

Oryza sativa Japonica Group Os01g0827200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37152013..37155985

Sequence Coding Region

37152405..37152485,37153259..37153345,37154201..37154461,37154545..37154754,37155001..37155876

Expression

GEO Profiles:Os01g0827200

Genome Context

<gbrowseImage1> name=NC_008394:37152013..37155985 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37152013..37155985 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggcgccgacgccgagtcctcggcggtggtcgacgccggcgagggccacggagacctggccctcgattcctcctccgctgcctccaccgaccctctgctccacccgccgccgtccccttcctccaccccctcctctcccaccgcgatcgccgaccacgacgcgttcatcgaggaagacggcgaggatgactccgcgccccacgtcccatccgcttccgacgaggcggccccggagttcgtccagatcaccgtctccgagcctaagaagcacgcggagccggccgcgggggcagcgggggtcattcctggctccgggagctacttctcctacctcatcaccaccagggcggccgacggcggcctgttccgcgtgaggcggcgcttccgcgacgtcgtcgccctcgcggaccgcctcgcggcggcctaccgggggctcttcgtcccggcgcgaccagacaagagcatcgtcgaggggcaggtcatgcagcggcatgagttcgtgaaccagcgctgcgccgcgctccagcgctacctcggccgccttgccgcgcaccccaccatcggccgcagcgccgaactccatgacttcctgactgagccaagcggcattcccacctccgcgggcgagtcacccagatcggatcccgcgttgagtgctgccatgtccgcggccgccgttaccgctccaacggcgcctgcaaagcctgggagagatatttttgggatgtttaaggacctgaagcagacggtggcgaatggattggtggcagtgaggccgcctccagtggaggaggaaactgatgcaaagttcgtcatgcacaaggccaagctggagtacttcgagcagcatctcacgacggcatctcagcaggtagaggctcttcttaaagcttatgatgatcttaaagcaactacaggtcaactgggaatgacattcattaagctggcaaagtttgaaaaggagcaggatacatgtaattctcagagaaaaagagctgttgatatgagcaatttcgcaaatgctgttatcaacatgagcagatcacagacaaaactaaatgctaaaattgaaatacatctgggcactatctatgaatacttggagacaatgacttctgttcgtaatgcatttactgatcgcgcaaatgctttgcttcgtgtgcaaagtctgtcaggagatttatttctcttgcatactcaggcagcaaaacttgagtccgtatcatccagaggaatgggccaggaaagattaagataccaaaagattgaagaactgaaagaaacaataagaaaaacagaagatgcaaaaggcaatgcacgccaggaatatgagcttatcaaggaaaacaacatgaatgagatcataaggtttaacaaagaaaaacgccatggtttggttgagatgctgaaaggctttgtaagaaatcaggtttcatactcagagcatatttctagtatatggacaaaggtagcagaagaaaccacaggatatacaggcaagggcagctga</cdnaseq>

Protein Sequence

<aaseq>MVGADAESSAVVDAGEGHGDLALDSSSAASTDPLLHPPPSPSST PSSPTAIADHDAFIEEDGEDDSAPHVPSASDEAAPEFVQITVSEPKKHAEPAAGAAGV IPGSGSYFSYLITTRAADGGLFRVRRRFRDVVALADRLAAAYRGLFVPARPDKSIVEG QVMQRHEFVNQRCAALQRYLGRLAAHPTIGRSAELHDFLTEPSGIPTSAGESPRSDPA LSAAMSAAAVTAPTAPAKPGRDIFGMFKDLKQTVANGLVAVRPPPVEEETDAKFVMHK AKLEYFEQHLTTASQQVEALLKAYDDLKATTGQLGMTFIKLAKFEKEQDTCNSQRKRA VDMSNFANAVINMSRSQTKLNAKIEIHLGTIYEYLETMTSVRNAFTDRANALLRVQSL SGDLFLLHTQAAKLESVSSRGMGQERLRYQKIEELKETIRKTEDAKGNARQEYELIKE NNMNEIIRFNKEKRHGLVEMLKGFVRNQVSYSEHISSIWTKVAEETTGYTGKGS</aaseq>

Gene Sequence

<dnaseqindica>3501..3581#2641..2727#1525..1785#1232..1441#110..985#gacgctcgccttccccggctttgactcacagactccacgtctccaccccgaatctcacttcccgtctcgcccccgcccccaatcctcaccgccgccgcccgggccagccatggtgggcgccgacgccgagtcctcggcggtggtcgacgccggcgagggccacggagacctggccctcgattcctcctccgctgcctccaccgaccctctgctccacccgccgccgtccccttcctccaccccctcctctcccaccgcgatcgccgaccacgacgcgttcatcgaggaagacggcgaggatgactccgcgccccacgtcccatccgcttccgacgaggcggccccggagttcgtccagatcaccgtctccgagcctaagaagcacgcggagccggccgcgggggcagcgggggtcattcctggctccgggagctacttctcctacctcatcaccaccagggcggccgacggcggcctgttccgcgtgaggcggcgcttccgcgacgtcgtcgccctcgcggaccgcctcgcggcggcctaccgggggctcttcgtcccggcgcgaccagacaagagcatcgtcgaggggcaggtcatgcagcggcatgagttcgtgaaccagcgctgcgccgcgctccagcgctacctcggccgccttgccgcgcaccccaccatcggccgcagcgccgaactccatgacttcctgactgagccaagcggcattcccacctccgcgggcgagtcacccagatcggatcccgcgttgagtgctgccatgtccgcggccgccgttaccgctccaacggcgcctgcaaagcctgggagagatatttttgggatgtttaaggacctgaagcagacggtggcgaatggattggtggcagtgaggccgcctccagtggaggaggaaactgatgcaaagttcgtcatgcacaaggccaagctggagtacttcgagcagcatctcacgacggcatctcagcaggtactgtgcttgttttgtactggtttagctggatgctagagcacatacaaacacagagtttacccttctgcataattagtacattatcatcgctgatagacaggataaatgaagcaagtgacatagagagttcctcatgcatgcttataatttgcgagttgagcaacaaatagatatgttgtggcacaaattttcagtgatgtgaataagcacagcaactgatcttctcgtttgtgcggtttgtaggtagaggctcttcttaaagcttatgatgatcttaaagcaactacaggtcaactgggaatgacattcattaagctggcaaagtttgaaaaggagcaggatacatgtaattctcagagaaaaagagctgttgatatgagcaatttcgcaaatgctgttatcaacatgagcagatcacagacaaaactaaatgctaaaattgaaatacatctggtatgttggaaattgtaatagaaagaatgtttgcttcttatgatttcttttcatgaatcataatattatttttgctttgacagggcactatctatgaatacttggagacaatgacttctgttcgtaatgcatttactgatcgcgcaaatgctttgcttcgtgtgcaaagtctgtcaggagatttatttctcttgcatactcaggcagcaaaacttgagtccgtatcatccagaggaatgggccaggaaagattaagataccaaaagattgaagaactgaaagaaacaataagaaaaacagaagatgcaaaaggcaatgcacgccaggaatatgagcttatcaaggtaattcacttgaacttgtggattaaattgagtgtacaatttgtgcattgtacttatcattcttcccagttaaatgttgacttattgttcataactgttgtatatttaactgcattatgcaaggttgtcactgtataagttcagatgacaaaatcaactacagtacggtttgttgtatttctttgttttggtccttttggaagagaaatacaatcaattgtcatgcagatcgatgcataacctgactgtagtatgttcagtttacgtttgtaacagagtgctgtttttttaacacagtaccttgcaatacttaaatggcttgaaacatcacacatactctacatgtgcatcacttgttcattctaattttagctcattagggaacataatgtttctaaagaggtcacaatgaatttagaactgtgctgtcaacactagcagcaggggtacgattgtttcgaaatgaacaagagtcaagagtgttggttccaaaatggtcatgttagaggctttgagctgtggtgaatgcattcagagtgcatccattgtttctgatgtcaaatgagttgctacgtacgtactgatctttaagttttcacgatgtaactttctgcaatttagaagatgatgatatgatatctgacttggttgtgctatgctgtgtactgggacctggtttcttctggaaaacctgtatgaggtttattttccaggtggaacctgtgatgtcatgacaatactggagtatggttgagcctgtcattcaactcattaactatatatatcggggtagtttccttttgggttattgtcaaaatattggagtttactttttaacattttcttataatgcaggaaaacaacatgaatgagatcataaggtttaacaaagaaaaacgccatggtttggttgagatgctgaaaggctttgtaagaaatcaggtagaatcactaaaattcaattgcaatgttattcttttgtctgctgttgtggatcctttcaatctattaatgataagcaaatgataaatatgcacttacttctgtattccaacaaaattccaagagtattagctagtgctgagatggaatgagagttactgtgatcatatggtgtatgtagtatctggtttaaattaaattcagtggatgatatctagttgcttcctttctgtcaatctgcaaagctaacactttgaaatctgttgtggcaactggtaaccatgatggtatgaaatttacctcgcacaactttgaagtctgcatctctatccatttaggattggttgtttcatttcatcgcagtctcagctttggttgcatttgtcaatttaaacctattcttctttttgacttcgctggtgatcctattcctagagcaacaactagacatttcccaaactatgcacacctagtgacctcagatgatggagaggaggggtcaaattggcattgttgatattacagcataatttgttccatagtggtcactatgcttaaaaatgatttagtgggctactgtgtttttttctctagaagagagtttgcaatttcattgccatcaggttcaccgttcatgttctctctctttttctttttttctttttcaaaatttccttctatactattgacatcaatagcacatttcatattttcagtaaatgcagtaaccacaaagctattaaaacttgcatcattgttcttctgcgatgcaggtttcatactcagagcatatttctagtatatggacaaaggtagcagaagaaaccacaggatatacaggcaagggcagctgaagtaggatgtaaatatgcatgtgaattttagccttttatctgcagatcaacatcagttacagaattcgaaatcgtcttatagctcaacacagtggtatagagtatagactataaacagagatgtcacacttccctccatccaaagggcgtcggatctgtgatttttctggagatggtatctccggctgtttaggcgtatagcagaattttctaggaaagagaatcaaatgatcagcaaaccaacacaactgtttttttttcccagtcctttttttttccaccctgggctttacagtaatgtaatgttgagtttctgtacacgaaactagattagctggaattttctggttcctgagagaaccacatacatgaagatttctttttggtctccg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0827200, RefSeq:Os01g0827200