Os01g0829000

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0829000| Description = Thioredoxin-like fold domain containing protein| Version = NM_001051221.1 GI:115440812 GeneID:4327529| Length = 2092...")
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Gene Name

Os01g0829000

Description

Thioredoxin-like fold domain containing protein

Version

NM_001051221.1 GI:115440812 GeneID:4327529

Length

2092 bp

Definition

Oryza sativa Japonica Group Os01g0829000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37233267..37235358

Sequence Coding Region

37233276..37233928,37234205..37234289,37234383..37234494,37234674..37234777

Expression

GEO Profiles:Os01g0829000

Genome Context

<gbrowseImage1> name=NC_008394:37233267..37235358 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37233267..37235358 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcgtcttcccactctcctccccctaaaaccctcgcctcccaccaccggcttaaaccccatccacggccgccgccatggccaccaccccagccgcctcctcgcctcctccgccccgccgccgccaccaccacggcctcccaagcccgagccccgtaccagccacgagaacctaggcgacgacacccccgatttccccacaaccaagccccgcaagccgcgccgcgggcgccggagcgaggcggcggcggtggaggacttcgtgcgtggccgcctcgagcaggtcttcgcttccatccgggagcgcgaccccgaagtcctcgaaggcaagggcgacatcttgaagcgaaaggaggagctctccgacgaggagggaaaagaggggactggtgaggaagagggggagctgaaggctgtggttgaggaggaggatccctcctggcctctggacgccgacatcgggtgggggattcgggcgtcggagtactttgacaagcattccatcaagaatgtgacggtggatggtgtggagatcgattgggagagggaggtcgaggagggatgggtcaaagagatcaactgcttggagtgggagagcttcgccttccaccctagccccctcatcgttcttgtcttcgagcgctacaacagggcagctgacaattggaagtttcttcaagaattggaaaaggcggctaaagtttactggaatagtaaagatcggctacctcctcggacagtgaaggttgatatgaatattgagagagacctggcatttgcacttcaagtaaaagaatgcccacaattattattcctcaggggaaacaagatattatacagggaaaaagaactaagaactgccgacgaactagttcaaatgattgcccatttctactacaatgcaaagagaccatcttgtgttaatcctgaagctattgcacctccgtgctaa</cdnaseq>

Protein Sequence

<aaseq>MLRLPTLLPLKPSPPTTGLNPIHGRRHGHHPSRLLASSAPPPPP PRPPKPEPRTSHENLGDDTPDFPTTKPRKPRRGRRSEAAAVEDFVRGRLEQVFASIRE RDPEVLEGKGDILKRKEELSDEEGKEGTGEEEGELKAVVEEEDPSWPLDADIGWGIRA SEYFDKHSIKNVTVDGVEIDWEREVEEGWVKEINCLEWESFAFHPSPLIVLVFERYNR AADNWKFLQELEKAAKVYWNSKDRLPPRTVKVDMNIERDLAFALQVKECPQLLFLRGN KILYREKELRTADELVQMIAHFYYNAKRPSCVNPEAIAPPC</aaseq>

Gene Sequence

<dnaseqindica>10..662#939..1023#1117..1228#1408..1511#gtcgccgtgatgcttcgtcttcccactctcctccccctaaaaccctcgcctcccaccaccggcttaaaccccatccacggccgccgccatggccaccaccccagccgcctcctcgcctcctccgccccgccgccgccaccaccacggcctcccaagcccgagccccgtaccagccacgagaacctaggcgacgacacccccgatttccccacaaccaagccccgcaagccgcgccgcgggcgccggagcgaggcggcggcggtggaggacttcgtgcgtggccgcctcgagcaggtcttcgcttccatccgggagcgcgaccccgaagtcctcgaaggcaagggcgacatcttgaagcgaaaggaggagctctccgacgaggagggaaaagaggggactggtgaggaagagggggagctgaaggctgtggttgaggaggaggatccctcctggcctctggacgccgacatcgggtgggggattcgggcgtcggagtactttgacaagcattccatcaagaatgtgacggtggatggtgtggagatcgattgggagagggaggtcgaggagggatgggtcaaagagatcaactgcttggagtgggagagcttcgccttccaccctagccccctcatcgttcttgtcttcgagcgctacaacaggtataaatcactattctacccagactctattcatgtgaacccatagtacctatatgttaggaccaaagtgataaacttcataaacttcaagcttctcactttatattgtcatatctgataattttgaatccattgaatcaaaagttcagaactacccctgaagtaatgcataaaaatgtaaaaatgtactatcgttttgagttgcctcagaaaattaggtgttctacttccatgacaggatgatatgtacgcgtaatgttttgcctttgtttatagggcagctgacaattggaagtttcttcaagaattggaaaaggcggctaaagtttactggaatagtaaagatcggctacctcctcgggtcagtgtgaatcatatttatagttaatacttgatgtattacggtaaggttattgaggtggttggtcatatgctaaatttaattgagttccagacagtgaaggttgatatgaatattgagagagacctggcatttgcacttcaagtaaaagaatgcccacaattattattcctcaggggaaacaagatattatacagggaaaaaggtgagtagttagttccatttttatggtaaatcctgttcacatagttaacaaattgaatggaactttgaattattaaattccttgattgctaatatgcactttcatgttaggcccacctttttcaatggtcaaaattgccactctgacaacacctgattgcctcatttgcttgtttacagaactaagaactgccgacgaactagttcaaatgattgcccatttctactacaatgcaaagagaccatcttgtgttaatcctgaagctattgcacctccgtgctaatctcctgcatttcagcgcttatgtattgagacagtgccttaattctcaactcttggtgagtgtacactgtggtaagcttttcatccaatgataacctgttccccgttagaaaactgtattctatactggtcattgttctctttaatgtcctttctctgtattagtacctggttcaggggagaatattattaattttgctaactttatttgccaggaaaatagtctaaatagaccagtgtggttatgatgcttgtatctgtaataaatgtatcacttgaagaggaaggagagaaacctcttactggctcatctcaagttgggagggggtcaggtatcaactatgtcatatattttggtatgctcatgtttttagctgtacactttcacctttgtactgtactctaacaaaacatacagttcatcaaatttctagatagaacaggagggaatgctagcttaattatctgcgtggccatcctgttaaggaggttgtaaagtcgattgtaaacttttgaggcgtagtgtaatgtcatttcacgccatagatgcaaaatgaaggcaggggggtcaacccatttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0829000, RefSeq:Os01g0829000