Os01g0829900

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0829900| Description = Oligopeptide transporter OPT superfamily protein| Version = NM_001051227.1 GI:115440824 GeneID:4327424| Length = 305...")
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Gene Name

Os01g0829900

Description

Oligopeptide transporter OPT superfamily protein

Version

NM_001051227.1 GI:115440824 GeneID:4327424

Length

3057 bp

Definition

Oryza sativa Japonica Group Os01g0829900, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37257843..37260899

Sequence Coding Region

37258015..37259130,37259238..37259427,37259576..37259710,37259796..37259893,37259995..37260161
,37260273..37260606

Expression

GEO Profiles:Os01g0829900

Genome Context

<gbrowseImage1> name=NC_008394:37257843..37260899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37257843..37260899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcggtcggcgacccgcgggatgggccgtcgacggagcgcgcgttcgaggggcagcccgtcccgccgtggacggagcaggtgacgctgcgcgccgtggtggcgagcgtggcgctgggcgtggccctgagcagcgtgatgatgaacctggtgttcacgtcggggatcatcccgtcgctcaacatctccgccggcctcctcggcttcttcctcctcaaggcctggacgcgcctgctcgaccagctcggctcgccgggccgccccttcacccgccaggagaacgccgtcgtccagacctgcgtcgtcgcctgcgccagcatgacatacagcggtgggtttggatcgtatctgctggccatggatcggaagacggcggagaagacgagcaccggggacgactccagcgcgagcgtcagtgagccggagttcggtcggatgatggccttcttcttcctcgttagcttcgtcggtctcctcgccattgtccccatgaggaagacaatgatcatccgccaccggctgacgttcccaagcggctcggcgacggctcacctcatcaacagcttccatacccctcacggcgctagacaagcgaagaggcaagtctcgctcgttctccggtcgtcgttggcgagcttgttctggtccatcttccagtggttctacaccggaggtccaaactgcggcttcacttccttcccaacgtttgggctcagcgccttcaatcgcggtttctacatcagtttgaacggaacttatgtgggaatcgggatgatcagtcctcacctgataaacgtctcgatgctcttcgggtccatcatctcctgggggatcatgcggccgtacatccggagcaaaagaggaatctggtacgacgccgatctccaggagacgaacttgaagagcttcagtggatacaaggtgttttgcgccatagcaatgatcctcggcgacggcatcttccagctcgtcgcgatctcgctgaggacgatacacacggtgcgccaccaccaggtagcggcggagacgctcaggtccttctccgacgtcgacgccatgccgcggccggtgatgagcttcgacgaccgccgcaggacgcaggtgttcctcagggagcacatcccgagcaccttcgccatcagcgggtacgtcgtcctggccaccgtctccaccgtcgtcatcccgctcatgtacggccaggtgaggtactaccacgtcgccgccgcgtacgcgttcgcgcccgtcctggccttctgcaacgcctacggcacgggcgtcgcggagaccaacttctcggcgcagtacaacaagctggtgatcctcatgttcgcgtcgtggatcgggatcaagaacggcgggatcgtcgggagcctcgtcatctgcggcatcgtgtcgtccatcgtctccaccgcctccgacttcatgtcggacttcaagacgagctacctgacgctcacctcgccgcgggccacgctggtgagccaggtgatcggcacggcgatggggtgcgtcgtcaacccggccgtgttcaccgtcttccaccacttctacgagatgaaccccaacaagacgtaccaggcgccgctggccaagatctaccggggcatcgccgtgctcggcgccggcggcctcgagctgcccaagtactgcctcgccatcagcgccaccttcttcgtgctggcgctggccgtctgcgcgatgcgggaggtggccgcgcacggcaagtggcgcgccgagccgtacatcccgagcgtcaccggcatggccgtgtcgttcctgctggtgccggcggtgtccatcgacatgtgcatcggcagcctgatcgtgttcctgtggaaccgcaacgacaagctgggatcgcaggtgttcgggccggtgctggcgtccgggctcatctgcggcgacggcctcttctccataccgtacgcgctgctcgcgaggtacgacgtcacgccgcccatctgcatcaggttcctcggccgggtgcagaacgacaagctggacgctttcttggcgagtaaggctaaagctggatga</cdnaseq>

Protein Sequence

<aaseq>MESVGDPRDGPSTERAFEGQPVPPWTEQVTLRAVVASVALGVAL SSVMMNLVFTSGIIPSLNISAGLLGFFLLKAWTRLLDQLGSPGRPFTRQENAVVQTCV VACASMTYSGGFGSYLLAMDRKTAEKTSTGDDSSASVSEPEFGRMMAFFFLVSFVGLL AIVPMRKTMIIRHRLTFPSGSATAHLINSFHTPHGARQAKRQVSLVLRSSLASLFWSI FQWFYTGGPNCGFTSFPTFGLSAFNRGFYISLNGTYVGIGMISPHLINVSMLFGSIIS WGIMRPYIRSKRGIWYDADLQETNLKSFSGYKVFCAIAMILGDGIFQLVAISLRTIHT VRHHQVAAETLRSFSDVDAMPRPVMSFDDRRRTQVFLREHIPSTFAISGYVVLATVST VVIPLMYGQVRYYHVAAAYAFAPVLAFCNAYGTGVAETNFSAQYNKLVILMFASWIGI KNGGIVGSLVICGIVSSIVSTASDFMSDFKTSYLTLTSPRATLVSQVIGTAMGCVVNP AVFTVFHHFYEMNPNKTYQAPLAKIYRGIAVLGAGGLELPKYCLAISATFFVLALAVC AMREVAAHGKWRAEPYIPSVTGMAVSFLLVPAVSIDMCIGSLIVFLWNRNDKLGSQVF GPVLASGLICGDGLFSIPYALLARYDVTPPICIRFLGRVQNDKLDAFLASKAKAG</aaseq>

Gene Sequence

<dnaseqindica>1770..2885#1473..1662#1190..1324#1007..1104#739..905#294..627#gcagtgacacctccaaatctaacatttcgcggttgcattaccatctcttgcctcttgggctctgccaagaatagccaaagcatatgtagccttcctgcctctcgtgttcactcgttcggtcctcttcctccgttctcctcttccccttgccctcctccagatcgaccatcacttgcatgcatgcgcaggcacgatcgaacgcagtagatgcattggctgccagctcgatccgcaccgacgatactccggcgaggcaaagcgcggcgtaaggaggaggaggaaaagtggccgggatggagtcggtcggcgacccgcgggatgggccgtcgacggagcgcgcgttcgaggggcagcccgtcccgccgtggacggagcaggtgacgctgcgcgccgtggtggcgagcgtggcgctgggcgtggccctgagcagcgtgatgatgaacctggtgttcacgtcggggatcatcccgtcgctcaacatctccgccggcctcctcggcttcttcctcctcaaggcctggacgcgcctgctcgaccagctcggctcgccgggccgccccttcacccgccaggagaacgccgtcgtccagacctgcgtcgtcgcctgcgccagcatgacatacagcggtacgccaccgcgcgcgacacgacgccgcgctcttgcctcttcctgcattgcctcttccattgatctcgccgtcgtaacgccgacgtcgctggcggctggcctgttcttaggtgggtttggatcgtatctgctggccatggatcggaagacggcggagaagacgagcaccggggacgactccagcgcgagcgtcagtgagccggagttcggtcggatgatggccttcttcttcctcgttagcttcgtcggtctcctcgccattgtccccatgaggaaggtacgatccacgaacgcacctaaaaatacaaaaaaaaaaagaagaagaagagatcatagctccctgattcttcgccgatttactggttcatccgtccgtagacaatgatcatccgccaccggctgacgttcccaagcggctcggcgacggctcacctcatcaacagcttccatacccctcacggcgctagacaagcgaagtgagcagattatcactagcttggtgagttatagccatgttgtcacatgatttacggtaatatctacgtctacttgtgatcacaggaggcaagtctcgctcgttctccggtcgtcgttggcgagcttgttctggtccatcttccagtggttctacaccggaggtccaaactgcggcttcacttccttcccaacgtttgggctcagcgccttcaatcgcgggtaagctgagccgagcctgagctaggcaacgaaccgaggaaaccgacgaattcgaacactgaattcatgcaaagtttttattcgggctggagaaattaatcgatcatcggcttgagtgacttgtgtttcgttgtttgttgcgttgcagtttctacatcagtttgaacggaacttatgtgggaatcgggatgatcagtcctcacctgataaacgtctcgatgctcttcgggtccatcatctcctgggggatcatgcggccgtacatccggagcaaaagaggaatctggtacgacgccgatctccaggagacgaacttgaagagcttcagtggatacaaggtactaccaatgatcgaatatttgttgttagacaaaaaaaaaaaaaagacgacgtcgatgatgtgcatcaagaatcagtcagacttcactttgttgtgatcgagaaggtgttttgcgccatagcaatgatcctcggcgacggcatcttccagctcgtcgcgatctcgctgaggacgatacacacggtgcgccaccaccaggtagcggcggagacgctcaggtccttctccgacgtcgacgccatgccgcggccggtgatgagcttcgacgaccgccgcaggacgcaggtgttcctcagggagcacatcccgagcaccttcgccatcagcgggtacgtcgtcctggccaccgtctccaccgtcgtcatcccgctcatgtacggccaggtgaggtactaccacgtcgccgccgcgtacgcgttcgcgcccgtcctggccttctgcaacgcctacggcacgggcgtcgcggagaccaacttctcggcgcagtacaacaagctggtgatcctcatgttcgcgtcgtggatcgggatcaagaacggcgggatcgtcgggagcctcgtcatctgcggcatcgtgtcgtccatcgtctccaccgcctccgacttcatgtcggacttcaagacgagctacctgacgctcacctcgccgcgggccacgctggtgagccaggtgatcggcacggcgatggggtgcgtcgtcaacccggccgtgttcaccgtcttccaccacttctacgagatgaaccccaacaagacgtaccaggcgccgctggccaagatctaccggggcatcgccgtgctcggcgccggcggcctcgagctgcccaagtactgcctcgccatcagcgccaccttcttcgtgctggcgctggccgtctgcgcgatgcgggaggtggccgcgcacggcaagtggcgcgccgagccgtacatcccgagcgtcaccggcatggccgtgtcgttcctgctggtgccggcggtgtccatcgacatgtgcatcggcagcctgatcgtgttcctgtggaaccgcaacgacaagctgggatcgcaggtgttcgggccggtgctggcgtccgggctcatctgcggcgacggcctcttctccataccgtacgcgctgctcgcgaggtacgacgtcacgccgcccatctgcatcaggttcctcggccgggtgcagaacgacaagctggacgctttcttggcgagtaaggctaaagctggatgatcctgaattcttgatcgaggaagaagtgggcacaattgtttattccgttctttttcttccaacacctgtagattatttagtgatagaactgatcttttcatgtagagcgaaatggactttttgtgcttttcaaacagttgagatttcaatccaacgaacatactatggcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0829900, RefSeq:Os01g0829900

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0829900&oldid=27485"