Os01g0830500

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0830500| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001051232.1 GI:115440834 GeneID:4327429| Length = 2033 ...")
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Gene Name

Os01g0830500

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001051232.1 GI:115440834 GeneID:4327429

Length

2033 bp

Definition

Oryza sativa Japonica Group Os01g0830500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37281407..37283439

Sequence Coding Region

37281569..37281883,37282464..37283333

Expression

GEO Profiles:Os01g0830500

Genome Context

<gbrowseImage1> name=NC_008394:37281407..37283439 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37281407..37283439 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcctcctcctccaccgccgcagcgtcatccatgtccggcgccaacggaggaggaggaggagggagcgtgttcccaggccctcccccgccgacgccgtcgaaccaccaccacgcgctcccgtcctccggcgccgcgggtgggggcacggacgccgcgctctcgacgatcctccagcgcctgctcctatcctctccggcgccgattctacgctccccgctctcctctcgctccagggccccgccgtcgctgccgcctctcgtttcgcttggctctagcggcacccttcgtctcgacgccgccgccgacgtggggtacttccacctcgagggacacggcgtcccttcccagctgccgtcctccgcgctcgccgagctctccctcgtcgacgcgtccgcgcgccgcgcgtcgaacctcctcacgctcggattcacggaggaggatcagcaggaagcggacggcgccgaggaccccgccctggtgttcgacgtcgacgacgagggggagatgggcgcgctcccggctgcggcggcggagtacgcgcggcggatgcgggacgtgggcatgcaggtggtggcgatgatgtccgggtgtcccgaggtgggcttcggggaggcgccgttcgcggaagggaggaggaaggcgaggtgcttgatgtgggtctccaaggttgccgctggcgaggcggcgcctccggccgccgggaaggcgaaggcgtacccgtacgtcgtgggcatccattgccagtgggaagcgtccgggaaggaggcggcgccggcgagctgggtgatggacgacggcggcgagtggacggccgtaggcgcgcgcgacggcgcactccttgtcaccatcggcaacattgctcaggtgtggagcaatggaaagctgaagaaagtgagagggatggctcgccccgtttcttctgcacccggagcagggcacggcgccgaggctgaccgcttgtcagtcaccgtgctgatcactctccccttggacagtgtcatctcgccattggtcccggtcacggatgccggagaagagggcggcgacgacgaggtggatggagccggcgatgatggggatgggtggagatttcactcgtttttactcgaggaccttgcgtggagggtgtataatgggcggcttcagttcaaggacccgctggtccggtatcggatataa</cdnaseq>

Protein Sequence

<aaseq>MAASSSTAAASSMSGANGGGGGGSVFPGPPPPTPSNHHHALPSS GAAGGGTDAALSTILQRLLLSSPAPILRSPLSSRSRAPPSLPPLVSLGSSGTLRLDAA ADVGYFHLEGHGVPSQLPSSALAELSLVDASARRASNLLTLGFTEEDQQEADGAEDPA LVFDVDDEGEMGALPAAAAEYARRMRDVGMQVVAMMSGCPEVGFGEAPFAEGRRKARC LMWVSKVAAGEAAPPAAGKAKAYPYVVGIHCQWEASGKEAAPASWVMDDGGEWTAVGA RDGALLVTIGNIAQVWSNGKLKKVRGMARPVSSAPGAGHGAEADRLSVTVLITLPLDS VISPLVPVTDAGEEGGDDEVDGAGDDGDGWRFHSFLLEDLAWRVYNGRLQFKDPLVRY RI</aaseq>

Gene Sequence

<dnaseqindica>1557..1871#107..976#aaggcgccaacgcctcccaccagccacgattcccagtttcctaccaaaaacttgtttctcctccacgtcggtcgagtccgagtccaccgctccggccgccgtctccatggccgcctcctcctccaccgccgcagcgtcatccatgtccggcgccaacggaggaggaggaggagggagcgtgttcccaggccctcccccgccgacgccgtcgaaccaccaccacgcgctcccgtcctccggcgccgcgggtgggggcacggacgccgcgctctcgacgatcctccagcgcctgctcctatcctctccggcgccgattctacgctccccgctctcctctcgctccagggccccgccgtcgctgccgcctctcgtttcgcttggctctagcggcacccttcgtctcgacgccgccgccgacgtggggtacttccacctcgagggacacggcgtcccttcccagctgccgtcctccgcgctcgccgagctctccctcgtcgacgcgtccgcgcgccgcgcgtcgaacctcctcacgctcggattcacggaggaggatcagcaggaagcggacggcgccgaggaccccgccctggtgttcgacgtcgacgacgagggggagatgggcgcgctcccggctgcggcggcggagtacgcgcggcggatgcgggacgtgggcatgcaggtggtggcgatgatgtccgggtgtcccgaggtgggcttcggggaggcgccgttcgcggaagggaggaggaaggcgaggtgcttgatgtgggtctccaaggttgccgctggcgaggcggcgcctccggccgccgggaaggcgaaggcgtacccgtacgtcgtgggcatccattgccagtgggaagcgtccgggaaggaggcggcgccggcgagctgggtgatggacgacggcggcgagtggacggccgtaggcgcgcgcgacggcgcactccttgtcaccatcggcaacattgctcaggtacttgcgtgcaaatgtctcattttgactagtttgcaaacggaaggacattagagcattaatttttgcacagataacacataaatgattgacatgtagacactcatattattgattcagtttgtaatttgcattaaaaaaacaaatggcaaacgtgtaaaattaattacaggttttacagctacgaatttgctggtcgttcaccacagaaaaaagatgtgttgattgttcgtgagtggcagagtctgtctctaagaagcatagacatgtactaaaaagcatccatttttattttgcgaaggcatcaaattctaaagtataggctgtgcgtcaccactcaatttggacccatttaggccccatgtctgcatcaaccggtgcatcactgcctcacagctcggtttggaatccaccaaaggaccttaaaaaagagtcaaagatctcggcttttgaagagaaaccacaaagtgaccatcatgtcatgtctgttgtttcctttactctttgagcagcatcaaagcagtaacaacttgcttgaatttgccttaatgcctcttgttttttatggcacgcgtgctaggtgtggagcaatggaaagctgaagaaagtgagagggatggctcgccccgtttcttctgcacccggagcagggcacggcgccgaggctgaccgcttgtcagtcaccgtgctgatcactctccccttggacagtgtcatctcgccattggtcccggtcacggatgccggagaagagggcggcgacgacgaggtggatggagccggcgatgatggggatgggtggagatttcactcgtttttactcgaggaccttgcgtggagggtgtataatgggcggcttcagttcaaggacccgctggtccggtatcggatataagatttgtccatggtcgtcggcatgttgcatagctttgttttgtttgttggtgtgtgtgtggattggttgtaatcctagtattggagtggtttgagcacgagtgaatcattcatcgtgtgaaaaaaatatacgaactgaaccaggaaatggctcattttcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0830500, RefSeq:Os01g0830500