Os01g0830700

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0830700| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001051233.1 GI:115440836 GeneID:432...")
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Gene Name

Os01g0830700

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001051233.1 GI:115440836 GeneID:4327430

Length

5852 bp

Definition

Oryza sativa Japonica Group Os01g0830700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37294322..37300173

Sequence Coding Region

37294428..37295104,37295253..37295424,37295746..37295945,37296055..37296210,37299466..37299829

Expression

GEO Profiles:Os01g0830700

Genome Context

<gbrowseImage1> name=NC_008394:37294322..37300173 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37294322..37300173 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaaccggcgcaagttctcgcaggcggggggcggcggcggcggcggggtgttcgacccgttcggcacgaaacaggccgtgtcgtcgctgcggaagggcgggcggctgccggtgtacgtggctggcgtcttcttcgtcatcttcgtcatcatcatgtacggcgaggacatccggtcgctcacgctggacccgatcgcgcgcgcggggacaacgccggcgcggatcgtggagccggtagtgacggaggagcgccacgtcgcccgggtcaaccctcctcggcgcgaggtctcgtccgcggagaaggccgccgcgttgccgctcgacgtcgacgagaggccgaagctggcgacgccgacgccgacggaggcggcgaaggaggtcccgaaggtcgagaagatcaggaagccgaagaaacccaagacgacgaagaagaagccgaggaagccgcggccggcgaagaagacggtggcggcggcagccgggggcctgctcggcgtgccggagacgtgcgacctgtccaagggcgagtgggtgttcgacaacaccagctaccctctgtaccgggaggagcagtgcgagttcctcacgtcgcaggtgacgtgcatgaggaacggccgccgcgacgacacctaccagaagtggcggtggcagcccaaagactgctccatgcccaggttcgacgcgaagctgttcatggagaggctccgagggaagcggttcatgttcgtgggggactcgctgaaccggaaccagtgggagtccatggtgtgcctggtgcagtcggcgatgtcgccggggaagaaatacgtcacctgggaggaccagcgggtcgtcttccacgccgtggagtacaacgcgacggtggagttctactgggcgccgttcctggtggagtccaactccgacgaccccaagatccacagcatccagcaccggatcatcaaggcggacgcgatcgcggcgcacgcacagaactggcgcggcgtcgactacctcgtcttcaacacctacatctggtggatgaacaccctcaacatgaagatcatgagaccgggcgggcagagctgggaggagcatgacgaggtcgtgaggatcgaggcgtatcggaaggtgctgacgacgtgggcgagctgggtgaacgacaacatcgacccggcgcgcacgtccgtcttcttcatgagcatctcccctcttcacatcagcccggaggtgtgggggaacccgggcgggatccggtgcgccaaggagacgatgccgctgctcaactggcacgggccgatctggctgggcacggactgggacatgttccacgcggcggccaacgtgtcccgcacggcggcgacgcgggtgcccatcaccttcgtcgacgtgaccaccatgtcggagcggcgcaaggacgggcacacctccgtgcacaccatccggcagggcaaggtgctgacgccggagcagcaggccgaccctggcacctacgccgactgcatccactggtgcctccccggcgtccctgacatctggaacctcatcctctacaccaggataatgtccaggccgcagctggtatag</cdnaseq>

Protein Sequence

<aaseq>MANRRKFSQAGGGGGGGVFDPFGTKQAVSSLRKGGRLPVYVAGV FFVIFVIIMYGEDIRSLTLDPIARAGTTPARIVEPVVTEERHVARVNPPRREVSSAEK AAALPLDVDERPKLATPTPTEAAKEVPKVEKIRKPKKPKTTKKKPRKPRPAKKTVAAA AGGLLGVPETCDLSKGEWVFDNTSYPLYREEQCEFLTSQVTCMRNGRRDDTYQKWRWQ PKDCSMPRFDAKLFMERLRGKRFMFVGDSLNRNQWESMVCLVQSAMSPGKKYVTWEDQ RVVFHAVEYNATVEFYWAPFLVESNSDDPKIHSIQHRIIKADAIAAHAQNWRGVDYLV FNTYIWWMNTLNMKIMRPGGQSWEEHDEVVRIEAYRKVLTTWASWVNDNIDPARTSVF FMSISPLHISPEVWGNPGGIRCAKETMPLLNWHGPIWLGTDWDMFHAAANVSRTAATR VPITFVDVTTMSERRKDGHTSVHTIRQGKVLTPEQQADPGTYADCIHWCLPGVPDIWN LILYTRIMSRPQLV</aaseq>

Gene Sequence

<dnaseqindica>107..783#932..1103#1425..1624#1734..1889#5145..5508#atctccataaagcttagcttgcccctctcgctcgcgtctctgtctctcacgcacgcgcaccgtgcagagcgaagaggagagggggctagctccgggtgccgtcgccatggccaaccggcgcaagttctcgcaggcggggggcggcggcggcggcggggtgttcgacccgttcggcacgaaacaggccgtgtcgtcgctgcggaagggcgggcggctgccggtgtacgtggctggcgtcttcttcgtcatcttcgtcatcatcatgtacggcgaggacatccggtcgctcacgctggacccgatcgcgcgcgcggggacaacgccggcgcggatcgtggagccggtagtgacggaggagcgccacgtcgcccgggtcaaccctcctcggcgcgaggtctcgtccgcggagaaggccgccgcgttgccgctcgacgtcgacgagaggccgaagctggcgacgccgacgccgacggaggcggcgaaggaggtcccgaaggtcgagaagatcaggaagccgaagaaacccaagacgacgaagaagaagccgaggaagccgcggccggcgaagaagacggtggcggcggcagccgggggcctgctcggcgtgccggagacgtgcgacctgtccaagggcgagtgggtgttcgacaacaccagctaccctctgtaccgggaggagcagtgcgagttcctcacgtcgcaggtgacgtgcatgaggaacggccgccgcgacgacacctaccagaagtggcggtggcagcccaaagactgctccatgcccaggtacgcaaccacgacgagccaccaatcacaatctgtaatttgcaccgggcgggaaagcatgcgccgtttcttctgaaatggaaacgctccagccagctggacacgcaagtataaacggcaagttttgaatttgtacgaattgattcaggttcgacgcgaagctgttcatggagaggctccgagggaagcggttcatgttcgtgggggactcgctgaaccggaaccagtgggagtccatggtgtgcctggtgcagtcggcgatgtcgccggggaagaaatacgtcacctgggaggaccagcgggtcgtcttccacgccgtggtgcgtactccgcccgtctccatccatccatccatcccgtctttaagattcgtaccgagctgctcgcatgatgaacgtgcatacatacccatccccatctgtctagtctagccaagccagccaacggcgggccgggtccacgcgcgcgcgcacggctgctgcgactagaccagggagcagttggtgtgtggtggtggcggcggctagctagaaccggtgaaccaacttgtgctcgatcagccgccgggtcggtttctgatagtgtgttgtcgtggcctgttgtgttctgaattgtcgggacgcgtgtgtacgtgcgtgcaggagtacaacgcgacggtggagttctactgggcgccgttcctggtggagtccaactccgacgaccccaagatccacagcatccagcaccggatcatcaaggcggacgcgatcgcggcgcacgcacagaactggcgcggcgtcgactacctcgtcttcaacacctacatctggtggatgaacaccctcaacatgaagatcatgtacgctaaatttacgttgcacgatatatcgatcgatcacaacgccgtgccgtgcaaccaacggcgatcgatcgtgggatgacagtgactgataggggtgatcttgcaggagaccgggcgggcagagctgggaggagcatgacgaggtcgtgaggatcgaggcgtatcggaaggtgctgacgacgtgggcgagctgggtgaacgacaacatcgacccggcgcgcacgtccgtcttcttcatgagcatctcccctcttcacatcaggtacgtaaaccagcctacctaccttgttacaattcgcattttttgtattctaccgtacgatcgatctcaagtatttggagtatagctggcacgtacgaacgcacgattgagcaatcaattaagctagtgtgtcagtatatctcaagtctcgacggtagtacggtagagtgggaaacgccaaaatcttggaacttttgcatgcaaaaacccaaagtaaaggtacgcacgcttgctgttggcgtcgcactgccaaagaaaaagaacgagacggcatgcaccgcatatggtgcgtgcgtgtgcgtcctgcagagaattttacacggattggtggtggagtgggcgccccgtctcggccggctacgcgcgaccgagtcggttcccgtgggcgaaacgaacagtacgaatcgaagcgggcccaggccaatagaaagagacgagtcacccggccgcctcgagccagattgtagttgtgcgcgcgcgtggaaatgtcagagaccctacatatgtgtcttgacttgtggtggtaattataaagattaaaccgtgcaaacgattcgtgttaattagtgtcaggcgactagcacaccgtgagcaccggacgcaacacatggattattcgtcattggcgttggccatgagaccgtcccttaattacttcaacgtggccgcggtcctgctataacatgctaccgcgacaactgtagcaaaccaactcccattaatttacttatagggtttgacatttcagttagtggcgtatcatctgtagactaaagtagagagagtgagtatctaacacgctcacacgggatgccttgccatgccggccagcaaatgactcctgccagtacaccatagcacggctaaccgacacacagctccgttgctgaaaagcttaaaattatctgcaaaccccaatggtgaccacacttgagcagtttgcacaaccacaccactgttgaaaactacgcttttatatgtatcacttggagcggcatcttcttagctaagctgtggcttctttccagttctcacttagcacgcactttctgcgcccaagaatgtgcgtcacataactgacccggtctgcaaatgtccaatcaaatgaggttactatcgggcgcccctattattgtttctgcttgttgtggccatctcgcatttcccaaaattttaatactcctactcccctactgcgccatgggtatatatgcatagttgtgtgtacctgttcgctcacatgggtaggagaattatttgcacatgagtccgagatggaagcttctccgcacgatctttttttcccatttggccgccgtttgcgagccgtggatgagtgaatcccacgatgacgacgacgatcccagacctgcaggacgggcaccgtagttcgtgatgacatattgaaaaatactagtatcatcgttgtgagggctcatcatcttgtgaccggaattctaggatctcggagtacagaacgcattgaaccacggagcaagtagataaattatctaatctgacacatatataggggttgaagattagtagaggggaattcaaatctggttggctgaacctagctactacacgtcgcttgtggttgacgatttgcttttcttcttgtgcaattcagcttgagagttcctcaaccccgtgttctactggtggagaattcaaacttacaagactgaacaaaaagaaatggtggtttgcaattgatatgtgtgatgaaacataaataaggcctggtagatcgatgcccatacgtgtattattgcgtactttacgatgaagggacagatgctgctttgttagtatcggatcgaacagaaggttgtgctggttactgttgcggatcgatgtcaattaggcttgataaggattggcatggcccgcggatgacgccttacgaaagctctccctctataaaaacttttaggacagtcccaacccataacactagatatggtttcaactctacatcatcaagaaactagtactagacactactcttctaatgcaaacaccactattccgtacttcaatttaatgctacttatctcacatgatgtcttggatgttgtgtaaaaatcatgtctcatacaagatatggtttccttctctttcctcatttattcacttgccacattattttttgttctacgtggcaacttatttaattatatggacaccatactagttattgggttgaaaatccctaatattaggaacagtcttatcctgaaactgataggtgcttagggtcccgtgaagcaaaccactttgatttgtctgcgaattttgaagtcaatgattcccttttgtatactacctccgtcccacaataagtacaatcatgagttttcgcgcccaactttaatcgcccgtcttatttaaaattttttataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtgacttatatctttagtttttttaaaaaaaaatttaaataaaacgaatggtcaaagttgggcgcggaaaaccatgactgcatttattttgggacggatggtgtaggaaagaggatgcgagaatatggttaactagtaaccggacaaaattgccgaggttcatgtcacatctggtaaacaaacaaatcaccggggttttatcgtcagttaattactagtagtattactgctttccttcttggattaggaagaaggccgaaaaaacatttgccgtgtccagctgtgtgatctcgaaagttgttgactattccgagtagggattgcgtctacaactgaggaacctacgcttttggcttctttgggttcggaggcatgtcacgtcaacagatacagttaaaagtttggtcaaccaaagcacaattactccgtactaccgatatcatgtactccctctgtcccataatataagtaattttgagtttttgcttacaacgtttgaccactcgtcttatttaaaattttttaaaattattatttattttatttgtgacttattttaatatctacagtactttaagtacaacttttcgttttttatatttgcaaaaaaaatttgaataagacgagttgtcaaatttatcgtgggacggagtgaggactacgatccccatgcttatgctactatgcataggtctgctaaataatttgcccatgatttcaccgttatcaaactgacaaaacttacatcctggtcgttaattcggtttctgaaaaatctgttttcgtggctctgcagcccggaggtgtgggggaacccgggcgggatccggtgcgccaaggagacgatgccgctgctcaactggcacgggccgatctggctgggcacggactgggacatgttccacgcggcggccaacgtgtcccgcacggcggcgacgcgggtgcccatcaccttcgtcgacgtgaccaccatgtcggagcggcgcaaggacgggcacacctccgtgcacaccatccggcagggcaaggtgctgacgccggagcagcaggccgaccctggcacctacgccgactgcatccactggtgcctccccggcgtccctgacatctggaacctcatcctctacaccaggataatgtccaggccgcagctggtatagcaaattccaagaatttacggagaccggattactcataggcagagctggttggttatacacaatcatcgtactgaaaagagatttttcttcttcttttcttcacattcttttctggccgtttcacctgctgtcagaagatgtctttcatttgttctttttcttcaggggttaggttaagtgggaagagatcgatacagtatatggttatatatatggctaatgggatggccatgcttgcgtacgttacgtgcctgcgtgcacagatgcgctgtaaggttcctgaccaaactgtacattggggaagaaaaggattaaagcgaaagagatgaacagatatggtttac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0830700, RefSeq:Os01g0830700