Os01g0831200

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0831200| Description = Ubiquitin domain containing protein| Version = NM_001051235.1 GI:115440840 GeneID:4327432| Length = 3296 bp| Defini...")
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Gene Name

Os01g0831200

Description

Ubiquitin domain containing protein

Version

NM_001051235.1 GI:115440840 GeneID:4327432

Length

3296 bp

Definition

Oryza sativa Japonica Group Os01g0831200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37338127..37341422

Sequence Coding Region

37338428..37338608,37339471..37339733,37339829..37339975,37341157..37341354

Expression

GEO Profiles:Os01g0831200

Genome Context

<gbrowseImage1> name=NC_008394:37338127..37341422 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37338127..37341422 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagcggcgttggaggaggcagatcgggcgggagggacgcggagggcgagtgggaggtccggcctggcgggatgctggtgcagcgcagggacggcgacacgggtccggccgtcaggctcagggtctcccacggcgcctccttccgcgacgtcgccgtgccggcgcactccaccttcggtgaattgaagggggtccttacccaggcaactggcgtagagcctgaaaggcagaggctcttcttccgtgggaaggagaagagtgacaatgagttcctgcatacagctggggtcaaggatggagcaaaacttcttctacttgagaagcctgcccctgccaatgtagagcagagggccgagccagtaattatggatgagagcatgatgaaggcttgtgaggctgttggccgtgtaagagctgaagttgacagactctctgccaaggtatgtgatttggagaagagtgtgtttgcagggagaaagattgaggataaagattttgttgtcttgacggagcttcttatgatggagctgctgaaacttgatggcatagaggcagagggagaagcaagggcacaaaggaaggctgaggtacgccgtgtccaaggtcttgtggagacgttggataagctgaaggcaagaaatgccaatcccttcagcgatcaaaacaaatctgtttcagtgacaacgcagtgggagacgttcgacaatggcatgggcagcttgaatgcacccccaccacgggtttcttccacacaaataaacaccgactgggagcaattcgactag</cdnaseq>

Protein Sequence

<aaseq>MMSGVGGGRSGGRDAEGEWEVRPGGMLVQRRDGDTGPAVRLRVS HGASFRDVAVPAHSTFGELKGVLTQATGVEPERQRLFFRGKEKSDNEFLHTAGVKDGA KLLLLEKPAPANVEQRAEPVIMDESMMKACEAVGRVRAEVDRLSAKVCDLEKSVFAGR KIEDKDFVVLTELLMMELLKLDGIEAEGEARAQRKAEVRRVQGLVETLDKLKARNANP FSDQNKSVSVTTQWETFDNGMGSLNAPPPRVSSTQINTDWEQFD</aaseq>

Gene Sequence

<dnaseqindica>302..482#1345..1607#1703..1849#3031..3228#aagttgtacttggcgaaaaaaaaaaaacagctctcgcaaaatctcgctgccgctgccgctcgcgagcaagctctaccgccactgccgcgcggctgttcttgcttctccggaggggaaggaaccccgcggggagggagccttccacccttcgcaaaagccacgcgccaccaaatcctccttttctcctcatcttccctccatcccttcctccctccggccgcgcgtcgctttcgccgcgaccgaatcggtggggtcgtgtggggggaggagaggggcgccataaaggcggctggggtcggcgatgatgagcggcgttggaggaggcagatcgggcgggagggacgcggagggcgagtgggaggtccggcctggcgggatgctggtgcagcgcagggacggcgacacgggtccggccgtcaggctcagggtctcccacggcgcctccttccgcgacgtcgccgtgccggcgcactccaccttcggtatgatcctcgcctcctccctcctcgtgaaactcgccgtgggcgattgcaacgagggtgccttgtgatcggttatgtttcgattagtatttttgatgtaggcaagctcaaacgcttgcccggaaagtgcacgacgaattgccgctcccggttagttacagcagcgaccaccatgctcgatctgctatgttgcacttgagctacggatcttgaccagtcaacccggcgattcgtcgaggagttaataagatcacatcgtccttgtctccttttccgtgaatcgaattggatgcaaatctagattcagaacaaaagcattgcaatactatgtgcttgtgtggcagggggcaggcagatggattatggtcctgctcttttaactataatatcctcttggactgtggcaagcagatgtacctaggtatatggcgacaaaaatatactagtttttaagtgtatatttgacgacatgtctgtgcgtcatgctatatccgtccaccattaggcccacactgaattactgttgtaccgctgtatttgtacacttctgttcattcatgacgttaaaactgttgtaccgttgtattgtattagtacactcctgttcattcatgacgttaaataggtgcacatactggctcaactgaggttgtgtgatttactaaatttacactattttatcattttctgtacagatggaagctcaatgttatatagttcaacgtttgaaagaagccttctcttatcgaatttttggagtagttcgcagaagcagtacatcatgatctgcttccttagaaggaactggtttccattgctttgatatgtagttaggattaattgttcactcttttgtatgaaggtgaattgaagggggtccttacccaggcaactggcgtagagcctgaaaggcagaggctcttcttccgtgggaaggagaagagtgacaatgagttcctgcatacagctggggtcaaggatggagcaaaacttcttctacttgagaagcctgcccctgccaatgtagagcagagggccgagccagtaattatggatgagagcatgatgaaggcttgtgaggctgttggccgtgtaagagctgaagttgacagactctctgccaaggtgaaggaataatgtttctccagcctcttccattaaacattaactcttcttatatcttgatgctgatacggtttttgtttttgttctattaccaggtatgtgatttggagaagagtgtgtttgcagggagaaagattgaggataaagattttgttgtcttgacggagcttcttatgatggagctgctgaaacttgatggcatagaggcagagggagaagcaagggcacaaaggaaggctgaggtacagtggccattatacatctcaacatgattggtcatggcttatctcatataatacaaattcaattactagtactggtgctgaaatattggtcatcctaagctttcaaaatggtttattttctgttgataaatagctatcacatactattactcaaacctgatttccttttatttactaaaatttaaccacacacacctatgctgatgatggaattttcctgatgaatcaacatacatctatgctgatgatggaatttttttgttccttaccatgtagtgtagcattgctaccctgtaatgataaatcttattaatgccctttataggaccatggcttaaaagccatgaaaagacaatacatacggcacatctagtaaagaaagcttgccatttagctattttctgctatgctgaatcaattatagtcttcatttgcatcacaagggtgtctcccaactccttccaggactaattctagtttctttgtttgactttgaccttcccccgtactccaatgattattttcttggttatgggtaatgaactagttgtgtggcttgagcagttccacattaagacggtccatttagccttaggcttgtaaccagtatagcacaaaactattttaacttggctgtgtggtttgaatccagcttctaatgcaaaacctgctggagcttatacttaataaatgcctggtctgatatgggatagacctgaggtttataaccatttattagtgttggtttcgagagaattttgccagattaggacctttgttggtcaagagtgaaatgctatttgtagcttcctcacttttttgttgccctattatattgaagaacaagaccagtgaaatggtcagcatgcgcagggtgcttcaaaaacattgttgagccaagcttaatcggtagaacatcttatatgtattgtaacatattaataaagtcaaaattcatttgtttcttcagtttaaagaatccttattttgcccttttgaattttatggagttggtttggttgcttgacggtaatatatctgaataattgttgctgctatgaccatctgaccacgggtttggtccctgttgcaaaatctttttgttgtcataaagtaatagtcactggaggcattgtatgctgtacataccctcacaataacgatgacttgcattgcaggtacgccgtgtccaaggtcttgtggagacgttggataagctgaaggcaagaaatgccaatcccttcagcgatcaaaacaaatctgtttcagtgacaacgcagtgggagacgttcgacaatggcatgggcagcttgaatgcacccccaccacgggtttcttccacacaaataaacaccgactgggagcaattcgactagcctcggattgcgttttctcattgtatcgttaacttgtgagatcaggtatctaaattcctttcacaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0831200, RefSeq:Os01g0831200