Os01g0832600

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0832600| Description = Similar to Leucoanthocyanidin dioxygenase-like protein| Version = NM_001051242.1 GI:115440854 GeneID:4327401| Length...")
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Gene Name

Os01g0832600

Description

Similar to Leucoanthocyanidin dioxygenase-like protein

Version

NM_001051242.1 GI:115440854 GeneID:4327401

Length

4631 bp

Definition

Oryza sativa Japonica Group Os01g0832600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37392150..37396780

Sequence Coding Region

37392734..37393230,37395205..37395538,37396228..37396497

Expression

GEO Profiles:Os01g0832600

Genome Context

<gbrowseImage1> name=NC_008394:37392150..37396780 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37392150..37396780 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggactgcatgcaggagtggccggagcccgtggtccgcgtgcaggcgctcgccgatagcggcctggaggccatcccgcgctgctacgtcaaaccaccgtgcgaccgccccgcccccgaggcggacgacgcgtcctccggcgccagcattccggtggtcgacctcggcaacggcggcgacgacgagggcggccagctcgcggaggccgtggcggcggcgtgccggggctggggcttcttccaggtggtaaaccacggggtgcggccggagctgatgcgcgcggcgcgggaggcgtggcacggcttcttccgcctgccgctccaggagaagcagaagtacgccaactcgccgcggacgtacgaggggtacggcagccggcttggcgtcgagaagggcgccatcctcgactggggagactactacttcctcgtcctctcgccggacgccgccaagagcccggccaaatactggccggccaatcccggcatctgcaaggaggtgtccgaggagtacgggagagaggtgatcaagctgtgcgagcggctgatgaggttgctgtcagcgagcctggggctggacgagacgcggttccaggaggcgttcggtggggcggactgcggcgcgggcctgcgcgccaactactacccgcggtgcccgcagccggacctcacgctgggcctctccgcccactccgatcccggcatcctcaccgtcctcctcgccgacgaccacgttcgcggcctccaggtacgccgccgtgacggccactgggtcaccgtgcagcccctccccgacgccttcatcgtcaacgtcggcgaccagattgagatcttgagcaactcgatgtacaagagcgtggagcaccgcgtgatcgtgaacgccgaggaggagcgcatctcgctcgcactcttctacaacccgagaggcgacgtcccggtggcgccggcgccggagctggtgacgccggagcggccgtcgctctactaccgtccgatgaccttcgacgagtacagggtgtacgtcaggaagaatggccccaagggcaaggcacagcttgaggctctcaagggccagtcaatcacccaaaacaacgaataa</cdnaseq>

Protein Sequence

<aaseq>MADCMQEWPEPVVRVQALADSGLEAIPRCYVKPPCDRPAPEADD ASSGASIPVVDLGNGGDDEGGQLAEAVAAACRGWGFFQVVNHGVRPELMRAAREAWHG FFRLPLQEKQKYANSPRTYEGYGSRLGVEKGAILDWGDYYFLVLSPDAAKSPAKYWPA NPGICKEVSEEYGREVIKLCERLMRLLSASLGLDETRFQEAFGGADCGAGLRANYYPR CPQPDLTLGLSAHSDPGILTVLLADDHVRGLQVRRRDGHWVTVQPLPDAFIVNVGDQI EILSNSMYKSVEHRVIVNAEEERISLALFYNPRGDVPVAPAPELVTPERPSLYYRPMT FDEYRVYVRKNGPKGKAQLEALKGQSITQNNE</aaseq>

Gene Sequence

<dnaseqindica>585..1081#3056..3389#4079..4348#aactccaacaaggcaaggaggaagagctgaggcatactccgaacccagccagagagctagctcagtgagcagtacacagtacactccccgggttatctctcccagcacgtatgtttatgtttaattcatttcctccatttatactctgtgcgcgctgcaaacgtagtacgtgtatgttctagctatagctcttgtcttgtgcgtgcgtgctgctcgtgttctcgtacgtgcgcccgcgtggttcaatagcgcctaattgatgggtgaacactggtatagtacgtacactagcgtggggcgtgacggcgtgtgccgatgtgcgcgcgcgtccatgcttggacgagtcgtcgtactctgccattaatcccgcccggccatctcgtgctagatctccgcgttcccgatcgatttcacgttcccgtgtttttgaggcgcggagcgcaccggagcgcgcgcgtcgtgcatgcatgtgcatgtgtacgcgcggcggccggcagggccggccgccttcttcgtagtaagcacacgtttgcttatcttgtgttctctttactgttgcataggccagctagcttttgcttgcaatggcggactgcatgcaggagtggccggagcccgtggtccgcgtgcaggcgctcgccgatagcggcctggaggccatcccgcgctgctacgtcaaaccaccgtgcgaccgccccgcccccgaggcggacgacgcgtcctccggcgccagcattccggtggtcgacctcggcaacggcggcgacgacgagggcggccagctcgcggaggccgtggcggcggcgtgccggggctggggcttcttccaggtggtaaaccacggggtgcggccggagctgatgcgcgcggcgcgggaggcgtggcacggcttcttccgcctgccgctccaggagaagcagaagtacgccaactcgccgcggacgtacgaggggtacggcagccggcttggcgtcgagaagggcgccatcctcgactggggagactactacttcctcgtcctctcgccggacgccgccaagagcccggccaaatactggccggccaatcccggcatctgcaagtaagcactagcttagatcacctcgatctctttgcaagtactgtacctgcatattcgccttttttccttcgagagatatttctcatttagctttgcccatgtgcatgcatgttttacctgcagaggttcttgtgcgttcttggtacgtcgaatttctttttcaaaagggtgggagtactgatcaaatcgtgcatatatatttgactgttacactgaatttataaatttccataatgtgcatctcagaattatttaaattagtgtacggcctgccgtaatttaaattgtttggtaaggcgagaacgttcattttgctccatatatatatgttctgtgtatacgttcattatacactgattctaacaaaatttagggcacatttattttttgctaataaatcttaccagatcaaccctatcaactttttataccggtgtggtcgtgatgatatatatatatatatatataggagcttgtttggccaaaattccgtcacttttttttcgacaaaccaaacatacctttagtttcattagggtttagatattattcatttatttatctattagaacattaataatggcatctttgattagtgatgtactaataataagtactactccacacgccaaaattaattagaagcatggcattcattaattaaaaatatgacaaaattgaacagttcacacgctaaaaaactaacggtacagtacatatttaatttactatcgtactgcatacataaatcaacatccattcggtcagcttttacctgagaacagtgtactgattgtcatgaacagagtaacttaactgcctggagcatccgttgatttccttttcgttctatgattgttgtacctttttctctacttgcactgtagtagaagatgcagtacttgctatttatataggtgtgtcttgactgtgtttggcatgggtagacgtaatacatacatataggtagagtaggccgatctaaaacttattagcagcatgaaaattgttgtagaaaagggacaggggtacgttcatctgactcaccttaatttctcagttcatgaaatccaacacgtgcatgcaacgaaaagtaggtgaagggtgctttcatgcaaaagttccatccagctagcaagagtgtgatgcatactagtccaaagcatgcaagacacaagaatgcatccactgtacatatgtaaaatgtcctagtcctcactcttgaccggcccagtctcacttcaccgctaaaacaaaatttcccagcttactagggcgggcactgtaaaatttctagtactatagtcactttccattttgtgtggtttagagatagttcaattaatagggtgacgactttcttttattttctccacaacatatattatcagctaaacgttcacaatcacaattattattttatacatttcttctcaacatatccactaccaccttttctttcttccttgtagtttatggatatgttcaatatcgctaatttgcagcccactgatacagtaaaaatataaagaagatctatattgatggcagctgcagctgctatggttgtacaaccacaatatagaaccgtcgcacaaccattatgtagatgttgcctcatatttttttattatcttctcaacttactacctccgttcataaatataatggataatatttttttaaagaaaaaacacataaacgagtaacgaaagaacaaactatagtataaaatgtgatatgaataaataaactagtgcaaaagttcataggggaaaaataaactaagtagctatatatgtcttaggatgataaaacttttatatttatggacaaactaaaagattatattatattggtagtcgtgtctactgagtacgtagtacgtgccatattaggtttagcgcattataagtatgccaactgaaattaacctaagcagcttattaatcaactaattattactgcgtgcagggaggtgtccgaggagtacgggagagaggtgatcaagctgtgcgagcggctgatgaggttgctgtcagcgagcctggggctggacgagacgcggttccaggaggcgttcggtggggcggactgcggcgcgggcctgcgcgccaactactacccgcggtgcccgcagccggacctcacgctgggcctctccgcccactccgatcccggcatcctcaccgtcctcctcgccgacgaccacgttcgcggcctccaggtacgccgccgtgacggccactgggtcaccgtgcagcccctccccgacgccttcatcgtcaacgtcggcgaccagattgaggtacacatatatgtaggacttatataattaattaatcaaagagcaataatcactatcgtggcttttccatgacctgggattaagaattactcatgattaattagttaagttcgagtcaaatgatgatcaggaataaattagagttgactagctagtggcggccggctagctcgatcgatctatgcggcgatctttcgcgcaggttacgcggcatgagagcacacatgcatggacggtgatgagccccaaccatgcagaaaatgcgcggattgtgatcgatcgctagctccataaatgcatacgagttttctgtgcgtcggtttgaagcttactactctctacctcggacagacatgtgcatgttacggcgaatcataccacgaaccgcccaagtacccaactgcactcaatgcatggccaacgaatccatatacgagtatatatcaatattccatgatgcatgtgcattgatatatgagcataagcatgaatatggtcgtatgtatctggctagctagctagctacgtacaaaatacacacatatatacagcttgcgttgctatagtactctagctagctagctagttgcatcaataatgtttcaagctgttcttctattttaatttctcaggaactaatatcttcttgtactgtgcatggatggaattcatggacggacgacgtacagatcttgagcaactcgatgtacaagagcgtggagcaccgcgtgatcgtgaacgccgaggaggagcgcatctcgctcgcactcttctacaacccgagaggcgacgtcccggtggcgccggcgccggagctggtgacgccggagcggccgtcgctctactaccgtccgatgaccttcgacgagtacagggtgtacgtcaggaagaatggccccaagggcaaggcacagcttgaggctctcaagggccagtcaatcacccaaaacaacgaataataaataattagtaattaattaactaattaagctacaccgatcgatccaacagcgacggcatgctaatccatggatcgaactagcaagctagctagctagcagtcagcattaattatcccatgtatgatctgaatcggaataacacatgcatgagtgtgtgtacatggcctacttaatttacgcaacatatatagttataggccttaattataataagcacatatatattgcacgcatgcgtgctcactatctgaagtatatatgcattatatgtaattcaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0832600, RefSeq:Os01g0832600