Os01g0833500

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Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0833500| Description = Similar to Serine carboxypeptidase II-1 precursor (EC 3.4.16.6) (CP-MII.1) (Fragment)| Version = NM_001051248.1 GI:11...")
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Gene Name

Os01g0833500

Description

Similar to Serine carboxypeptidase II-1 precursor (EC 3.4.16.6) (CP-MII.1) (Fragment)

Version

NM_001051248.1 GI:115440866 GeneID:4327407

Length

3363 bp

Definition

Oryza sativa Japonica Group Os01g0833500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37443909..37447271

Sequence Coding Region

37444157..37444300,37444387..37444492,37444642..37444737,37444822..37444949,37445588..37445848
,37445931..37446016,37446112..37446204,37446308..37446403,37446534..37446888

Expression

GEO Profiles:Os01g0833500

Genome Context

<gbrowseImage1> name=NC_008394:37443909..37447271 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37443909..37447271 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcacaaggccgcggctctggtgctgctgctagtgtcagtgtcagtggcggccgcggcgtcgggcgaccaggagagcgaccggatccgggagctccccgggcagccggcgaaggtgaggttctcgcagtactccggctacgtgacggtcaaccaggcgcacggccgcgcgctcttctactggctggtggaggcggtgccggcggccgggcccatcgcgccgctcgtcctgtggctcaacggcgggccggggtgctcgtcggtcgggtacggcgcgtcggaggaggtcggcccgttccggatcaggcccgacgggaagacgctgtacctgaaccccaattcttggaacaaggcggcgaatttgctgttcttggagtcgccggccggcgtggggttctcgtactcgaacaagacgttggatctgtacgtcgcaggagatgctaagacagcatcggatgcttatgcatttctggtgaactggttggagagattcccacaatacaagtacagggagttctacattgctggggagagctatgcagggcattacgttccccagttagcccagctcatctatgaacagaacaagggcattcagaatccaataattaatctcaaaggattcatggtgggtaatgcggttactgatgactaccacgactatcttggtacctttgagtattggtggactcatggcctcatctctgacaacacttatcacaacctgaagaagacatgcttgcttgagtcctctgagcacccttctcctgaatgtctaaagaacctgaacctagccagttcagaagaaggcaatatcgatccttacagcctgtatacaaagccctgcaataatacagcctctctcaaacttggcttgggaggacgctacccttggttatccagagcatatgatccctgcacagaaagatactcaagtatttactacaaccggccagaagtgcagatagcgatgcatgctaacaccactgggattcaatattcatggaaaacttgcagcgatattgtcggatcatactgggcagattccccgaaatctatgcttcctatctaccaagaattgattgcagctggtatcaggatatgggttttcagtggggatacagatgctgtagttcctgttactgcaacaaggtactcaatagatgctcttaagcttccaactatggtcaattggtacccttggtatgaccacggaaaggttggaggttggagtcaagtgtataaaggattaactctcgtcactatagcaggcgcaggccatgaggtaccactacaccggcctcgagaagcacttatattattcagacacttcttgcagaatacacccatgccaactcaatag</cdnaseq>

Protein Sequence

<aaseq>MAHKAAALVLLLVSVSVAAAASGDQESDRIRELPGQPAKVRFSQ YSGYVTVNQAHGRALFYWLVEAVPAAGPIAPLVLWLNGGPGCSSVGYGASEEVGPFRI RPDGKTLYLNPNSWNKAANLLFLESPAGVGFSYSNKTLDLYVAGDAKTASDAYAFLVN WLERFPQYKYREFYIAGESYAGHYVPQLAQLIYEQNKGIQNPIINLKGFMVGNAVTDD YHDYLGTFEYWWTHGLISDNTYHNLKKTCLLESSEHPSPECLKNLNLASSEEGNIDPY SLYTKPCNNTASLKLGLGGRYPWLSRAYDPCTERYSSIYYNRPEVQIAMHANTTGIQY SWKTCSDIVGSYWADSPKSMLPIYQELIAAGIRIWVFSGDTDAVVPVTATRYSIDALK LPTMVNWYPWYDHGKVGGWSQVYKGLTLVTIAGAGHEVPLHRPREALILFRHFLQNTP MPTQ</aaseq>

Gene Sequence

<dnaseqindica>2972..3115#2780..2885#2535..2630#2323..2450#1424..1684#1256..1341#1068..1160#869..964#384..738#aatcatccccggcgcggggaaagcaagagaaaatctccgcacactacctctctgtcccgcgcgccgctggtcagagcgaatgagctcaaccgccgtcctcccgccgcctccatttctttagcggttgccaagggttcttgagctgtccttggtcaatgagagtgcaggaaggtggtggcgtaaggatcaaagctcacgaccccgcctcactgaaatccatgcaagcaacctggcctcctttggtggctagtagctctggatttcttatagctcatcttgttcagtagcagcagcagtgttgcgtacttgagcaagtgcaaggcttcttgcttggcacgctcaggtgtcccgtggtccggccattggagattttggagctcgtaatggctcacaaggccgcggctctggtgctgctgctagtgtcagtgtcagtggcggccgcggcgtcgggcgaccaggagagcgaccggatccgggagctccccgggcagccggcgaaggtgaggttctcgcagtactccggctacgtgacggtcaaccaggcgcacggccgcgcgctcttctactggctggtggaggcggtgccggcggccgggcccatcgcgccgctcgtcctgtggctcaacggcgggccggggtgctcgtcggtcgggtacggcgcgtcggaggaggtcggcccgttccggatcaggcccgacgggaagacgctgtacctgaaccccaattcttggaacaagggtgcgtagcttttgcaattgttgttcttgagctccattgttacagcaagtgatgctgctaacaatggcagtgctgggagtggctctggctgttgattaatttcgtttttaatttctgttggtgattgcagcggcgaatttgctgttcttggagtcgccggccggcgtggggttctcgtactcgaacaagacgttggatctgtacgtcgcaggagatgctaagacaggtaaacaaattcgaggccatttgtttctgtgagctatccactaagccctgatttaccatgattcagttactgattacttgtcacttgttttttaatcttgtagcatcggatgcttatgcatttctggtgaactggttggagagattcccacaatacaagtacagggagttctacattgctggggagagctatgcaggtaagtttgcatgagataagtttttattttattttctgttcttgctatttggtggatgaaagacttacagggatgtatttccttggtgctttcagggcattacgttccccagttagcccagctcatctatgaacagaacaagggcattcagaatccaataattaatctcaaaggattcatggtagatctctgaaatccatgttctgcctgttctagtttgagtatgtgtatgttctgaatttttttggtttctgaaaaattaggtgggtaatgcggttactgatgactaccacgactatcttggtacctttgagtattggtggactcatggcctcatctctgacaacacttatcacaacctgaagaagacatgcttgcttgagtcctctgagcacccttctcctgaatgtctaaagaacctgaacctagccagttcagaagaaggcaatatcgatccttacagcctgtatacaaagccctgcaataatacagcctctctcaaacttggcttgggaggacgctacgtaagtgttctttttttctcattgacttttgataacttagatcaccctcttgactttgttgcacagatctagttccactacttagatcatttaaacccattataacagatctatttagatggtcatgaaacagtgaatttactactcgaaacacattgaactgtgctgattaagaataagaaagtagctgcattgcaacacataaaagaggaaaattaccttttggaaatccattatataatgtggtaaaagatgcaataataaacttattgtttagtaaatataccttttggctagaactaatttcttttttaagaagttattactgatttcagttagattattttgttatatatttagataatggattgcgtttatttcctattgtggcatttggtacttcttgaatacagaaaaggttatatcaccctatctagatcagatagagtgcatgggttgatgtttctgcaatattatactgtactttgcagaaccttagaatttgctgttttattttcctgttctcattcctctgcctagcatgtcttttttcagcttgatttgatgcctatatatgtatatcggtagataattgttggccatactatttgtacctaacatcatgttgccatccacagccttggttatccagagcatatgatccctgcacagaaagatactcaagtatttactacaaccggccagaagtgcagatagcgatgcatgctaacaccactgggattcaatattcatggaaaacttgcaggttttaataaatatagatgttaattgtgccttaaaatttctgctcttcttacacacacatatactcatttggtctgttctacagcgatattgtcggatcatactgggcagattccccgaaatctatgcttcctatctaccaagaattgattgcagctggtatcaggatatgggttttcaggtcagtccagtacttcaactcattgtttgattcaatactacgatctaatgagttactactgctacaaagttaatccattatattgtgctggctaacatttagtgagatgacttaacttgctatgtgattttctttactccttttcacagtggggatacagatgctgtagttcctgttactgcaacaaggtactcaatagatgctcttaagcttccaactatggtcaattggtacccttggtatgaccacggaaaggtcagtatactaaaaactatttgcagttctaagcaaattctgggtcagaatgaatcatttgaatacatgatatattcctcttgcaggttggaggttggagtcaagtgtataaaggattaactctcgtcactatagcaggcgcaggccatgaggtaccactacaccggcctcgagaagcacttatattattcagacacttcttgcagaatacacccatgccaactcaatagccacttgaagcagaatgatagagtaaactacgacaatcatataaagtgctaaagtgtttttacattattttttaatttgatttgattattacaacatgatatcaactatctctactaaatgtatgtatgtttcttactagctagtagggaaacctgacaattgtactgctccagctaaagagctcctttgtatatgatactgatagtgattctttgagcagtaaaatttacaattttacatctttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0833500, RefSeq:Os01g0833500