Os01g0837800

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Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0837800| Description = Similar to Cation diffusion facilitator 8| Version = NM_001051276.1 GI:115440922 GeneID:4327371| Length = 4535 bp| ...")
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Gene Name

Os01g0837800

Description

Similar to Cation diffusion facilitator 8

Version

NM_001051276.1 GI:115440922 GeneID:4327371

Length

4535 bp

Definition

Oryza sativa Japonica Group Os01g0837800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37673282..37677816

Sequence Coding Region

37673580..37673930,37674745..37674978,37675161..37675241,37675750..37675995,37676090..37676205
,37677401..37677620

Expression

GEO Profiles:Os01g0837800

Genome Context

<gbrowseImage1> name=NC_008394:37673282..37677816 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37673282..37677816 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggtcgcgggcggtggggaggagggggaggagctgctcctgctctccgccgtcgaggccggttccttcggcggcggtggcgacggtggcggcgcgggcgcagcggcggagaagtcgtggcgcctcaacttcgacggcttccgaccgccggaggtgcagcaggagaggcggccgccccgcgggctccaccaccactgcctcggcgtcctatctcaaggtcctgaggacgtagttgctgaatactaccaacagcaagtggaaatgctagagggctttaatgaaatggatacacttactgatcgtggttttcttccaggaatgtccaaggaagagcgtgagaaggttgctaggagtgagactttagccatccggctatcgaacatagcaaacatggttctttttgctgcgaaagtgtatgcttctgtgagaagtggttcacttgctattattgcttcgactttggattctcttcttgacttgttgtcaggatttatcttgtggtttactgccttctctatgcaaacaccaaatccctacagataccctattggtaaaaagcgtatgcagccactgggaatacttgtctttgcctctgttatggcgacacttggccttcagatcatcctagaatcagtacgctcgttgttgtctgatggggatgagttcagcttgacaaaagagcaagaaaagtgggttgtggacatcatgcttgcagtgacattagtgaaacttgcccttgttttatattgccggacattcacaaatgaaatagtgaaggcttatgcacaggatcatttttttgatgtcatcacaaatatgattggtcttgttgctgcactactagcgacttatatcgaaggttggatcgacccagttggtgcaatcatcctagcaatctacacgatcagaacatggtcgatgacggtgctcgagaacgtccactccctggtcgggcagtcagcctcgccggaataccttcagaagctgacctacctatgctggaaccaccacaaggccgtgaggcacatagacacggtgcgggcgtacacgtttggctcccattacttcgtcgaggtggacatcgtgctgccgtcaagcatgccgctgcaagaggcgcacgacatcggcgaggccctgcaggagaaactggaacgcctgcctgagatcgagcgagcgttcgtgcacctcgactacgagttcacccatcggcccgagcacgctctgtcccatgaaaaatag</cdnaseq>

Protein Sequence

<aaseq>MAAAVAGGGEEGEELLLLSAVEAGSFGGGGDGGGAGAAAEKSWR LNFDGFRPPEVQQERRPPRGLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGFNEMDTLT DRGFLPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIASTLDSL LDLLSGFILWFTAFSMQTPNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESVRSL LSDGDEFSLTKEQEKWVVDIMLAVTLVKLALVLYCRTFTNEIVKAYAQDHFFDVITNM IGLVAALLATYIEGWIDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTY LCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEI ERAFVHLDYEFTHRPEHALSHEK</aaseq>

Gene Sequence

<dnaseqindica>3887..4237#2839..3072#2576..2656#1822..2067#1612..1727#197..416#aatcacgagacccgcactctttttttgcgtcgctcgagcgcccgcgttccccgcttcgccgaaactaccaaccgcctcgccgttctcctctccccgtggcgccgccgcgccgcacggcgggagggcaactgaccgagggagactgcccaccagcgtgccgcgcgccgtcgcctccggctccctggttcgtggaataatggcggcggcggtcgcgggcggtggggaggagggggaggagctgctcctgctctccgccgtcgaggccggttccttcggcggcggtggcgacggtggcggcgcgggcgcagcggcggagaagtcgtggcgcctcaacttcgacggcttccgaccgccggaggtgcagcaggagaggcggccgccccgcgggctccaccaccactgcctcggcgtcctatgtacgatctctctccaactcgccgtcgcgcgcttgctacccttgtaccgtgtgatgtttatggtcttatggatatattgttgtgttcgtatgcttggttgcttgatctaggctttcattcgtttgccttttctcgtgtgttggcaacatggttcatttgtttcggtagttgccttttgcaatagatatctactaaagtaacttatttttatctgctttctataaaagcagttccgtttaggcctttataatataaaaaggcagtaactccttttatttttcgtttcagcaactagcaagagctcagctgtgctagtatagatggggattggattaggatgttgacggtagtggtaggctagattcttcgtgtgcaacctttggcagataagaataggaatggggaatgttatattggtggaatgaggaatttgttgtttctagctttctgatattgcctagttgcctatactatcgtgctcatctggggcagggcaggacggtcctcacgtgagctgctctgttcttggagtgcacgtgaacagagttctaagaaaacttttttttttatcagcgggggtggttagcactgagccgagttgtaaagactggggcactgggtgtgggtgactgacagcgtgagaagggcaccaggtgtcttagcgttcatgtattgtcacaattattttacccttttatgcaattttagaggttttgttctggttaacaaagttgcattgggcacaaaaagttgaattaataacccaatcatgtcatttggccgcactcaacatttggggtttggatatctagtagtcgtttctctcccgtattgtcaatcactgctttcccatggctatagaagtagggagtccttgtgggcttaaagtcgtggtctattggtggttgaattcaaggccccacaatcctagtactagtagtactatttaaatcagaattgacatttttatcctgtacatttcaatagctgtagcattttattcagtggttctacatgtgatataatcaatagatgaaatataattaattagatatcagagttatcaggttcactgagaagtggtataattcagtagaacatgtgaagcatacatgcctgcttgctccactaatgtcactatctttcttcatgctggacataattttctgtgattgatgtacgattctatcttcagctcaaggtcctgaggacgtagttgctgaatactaccaacagcaagtggaaatgctagagggctttaatgaaatggatacacttactgatcgtggttttcttccaggaatgtccaaggtatgtttgataagcttttctgttgtaacagtagggaagacaaattgtttaacaactgcattgcaacactgaacataaatttatttgcctgtaggaagagcgtgagaaggttgctaggagtgagactttagccatccggctatcgaacatagcaaacatggttctttttgctgcgaaagtgtatgcttctgtgagaagtggttcacttgctattattgcttcgactttggattctcttcttgacttgttgtcaggatttatcttgtggtttactgccttctctatgcaaacaccaaatccctacagataccctattggtaaaaagcgtatgcagccactggtgagtcctatcacaagattaccttcatgtttgccatgcttattcttcttactgtaatttatgcaattgattccaagggactcaactctcggctattcatgatgcatagccagttactccctgtgatgttcttttttccgcaaaatgaaaagaaaaagtggaaatgctccaggaatgaaaagaaactaaactattgcaaacattcctggcagatggaccatagtaacatgcggaattttgtgttttgaggattttcatagttactagaaatcacgttcccaatttcccccagatatctcttgctcttaggtcaatgctactgtatcaatatctttgctactccggcagcagacaatttatgcatggaaatatttatgataagtccttcagtctaatttcactaaatgatcgagtttatcgcttctcttttcacttagtattatcagtcatacacttttaagttccaaatttcaatatgttgactgttccatcacaatatcttcttcagggaatacttgtctttgcctctgttatggcgacacttggccttcagatcatcctagaatcagtacgctcgttgttgtctgatgtaagtctgctgatgttttgttggccttgaactcctactctcattttgcttttgaccagaaactttgcctgaggatttcttttctagaacgataagtgtctttgatgtttgttggctttgaaattctgttgtagcttgccatatacctttctgattgctgaacttattgtcttgttctccagggggatgagttcagcttgacaaaagagcaagaaaagtgggttgtggacatcatgcttgcagtgacattagtgaaacttgcccttgttttatattgccggacattcacaaatgaaatagtgaaggcttatgcacaggatcatttttttgatgtcatcacaaatatgattggtcttgttgctgcactactagcgacttatatcgaaggttggatcgacccagttggtgcaatcatcgtaagtaccaaaaagttttctcctgttccattgcagtagtgtaaaactagagttcaagtaaatgctatatttgatctaatcgttaatttggagctaggcacatcatcctgattgggaattgactgggaaaagtaactagtttctgccaattttccatgtatcatgatatattctttcaaaaaaggaaaacataccatgatgaaaagatcagctatgactttattgtaaccagagatgcaaatcctggcagtaccagttactgccatttatccacgagctggtttgttcgtactggccagaacaacttaaattttaatttggaatacacattttgtacaaccatgcatagtcatattcatatgttttatgaacaactacacattagctatatcaaaagtttgaatccaaagttttgaactaaaaaaccggctcgatttgttatggatgttacaggtttttgaattagtgtttgattttgctcttttgtccggtaaaaaccagtaactggcagttaccggtttcttaaagggaccaatatttttttttccttcaaaactggtgtccataaccttgacagtgacttggtttaaaagagagaatatttctagtctgcctgactaaattcctctactgaaagtctgatgaaatagcttccagtggtttccatcgtcctgggtgtgtagtcctttgcaacgtccaaacgtttcaaacatgagaattactcaagaatcttgtattccaaacgtttccttaggtttttgttaagaaaaacacgctgtatttcagagactactttctgttttctcgtttgcagctagcaatctacacgatcagaacatggtcgatgacggtgctcgagaacgtccactccctggtcgggcagtcagcctcgccggaataccttcagaagctgacctacctatgctggaaccaccacaaggccgtgaggcacatagacacggtgcgggcgtacacgtttggctcccattacttcgtcgaggtggacatcgtgctgccgtcaagcatgccgctgcaagaggcgcacgacatcggcgaggccctgcaggagaaactggaacgcctgcctgagatcgagcgagcgttcgtgcacctcgactacgagttcacccatcggcccgagcacgctctgtcccatgaaaaatagccagacgcaggttgcaagttcgcaaccactggtattaagtttagcagcagcaattagtttcagaatttctggtgctcgtcaggaaacctgcgggtgtatgagattttaattctgtatactggattggcgggtgtgacagtgccaaagccgtagattgtgatttgtaactacttgttgtagactataggattcttgactgttaaatccgtcatctcgatcatctcgtgtagtacaatttatactcaaagtctagagagacatatgcctggtaattacaggctcacagccactttacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0837800, RefSeq:Os01g0837800