Os01g0839300

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Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0839300| Description = Similar to 50S ribosomal protein L17| Version = NM_001051287.1 GI:115440944 GeneID:4327382| Length = 2494 bp| Defin...")
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Gene Name

Os01g0839300

Description

Similar to 50S ribosomal protein L17

Version

NM_001051287.1 GI:115440944 GeneID:4327382

Length

2494 bp

Definition

Oryza sativa Japonica Group Os01g0839300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37763249..37765742

Sequence Coding Region

37763329..37763384,37763473..37763527,37763624..37763674,37764550..37764641,37764889..37764966
,37765366..37765519

Expression

GEO Profiles:Os01g0839300

Genome Context

<gbrowseImage1> name=NC_008394:37763249..37765742 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37763249..37765742 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcaggacgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaaggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcgggaaagagggcacattggatgcagcaagacgtgcttctgcttttgttcggggagatgatgttgttcataagctatttacagagctagcctaccgttacaagaaccgagctggtgggtacaccagactattgcgaactaggatacgagttggtgatgctgcaccgatggcatacattgagttcgttgatagggaaaatgaacttcgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccctgggccaagtctcgtgctagccaacagtgggcgggacctaaaatcagcgagggctctagaaaagaaggcttatga</cdnaseq>

Protein Sequence

<aaseq>MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRK ADQMVQLGKEGTLDAARRASAFVRGDDVVHKLFTELAYRYKNRAGGYTRLLRTRIRVG DAAPMAYIEFVDRENELREAKPATPQPPQRSPLDPWAKSRASQQWAGPKISEGSRKEG L</aaseq>

Gene Sequence

<dnaseqindica>81..136#225..279#376..426#1302..1393#1641..1718#2118..2271#accgagttccacctcccaaacccctcaaccctcgccgccgccgccgccgccgccgctcgtcgctctgctccgccgcagccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcaggtaccatttggcctcgatccttctctctcgagcgcgagatccgcatctctctgtgtgtgtcggagtcatggacatgtctgttcggcaggacgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaaggtacgtactctctcctttccgcctaggatctggtcgaacaccttgtagagtgggggcgcctcggatttatgtgctgggagtcgtggttgattccaggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcgggaaagaggtaaaaactgctacctgtgaaacattctcctgttgccatagaactataacctgaaaaaaattactgtttagtgccatccatgaacctatgtagagctttggattgccgcatttttttttgcacaaccgcgcacacagttctgtagtacgagtaactagtaagcatggatgagtacttgattagttccatgagcgtgacattttgtttactgttaaatttcgtacaagagatgaattgactattgagggatgtagggatgtgtcttcacaagaatggcagtatggaaacaatttactctctccatcttgaaatataagcatttctgattttgtcctaactcaaactatcctaagtttgaccttatagaaagaaagcaacaatatccacgatatcaaatgagtatcattagatccattatgaaatatattttcatactttacctattagacatggtagtagatgttaatattcttctctatacacttgatcaagaacaaaattagaaatgcttatattttgggacggtgtgagtaatgttttacatcgtggttttaatcagattcaaatgagttttctacttttgtattttattttctctcttcgttatgagatggttgaaatgttcaggtcatatagctaatcaatgattggttgtctgataaattgtctcaagtttctgttacatactaggcgatccatctgaatgatgtcttcttgttttggagtcgatgctacataagccttcctgtgattgtgccattctgcatgttaccttaaacgtcttttgatctggctggaatgttgcattgatttatttaagtctattcttaaaggtattcgtccagaaacttatcttttatttgcataaattatagggcacattggatgcagcaagacgtgcttctgcttttgttcggggagatgatgttgttcataagctatttacagagctagcctaccgttacaagtaaaactccttcatgtgttgtgtatcaatttgatttgtttctaccactgtttaaaaatatgtcatgttagcatctcacataaggaataaagtaaaatgcctaccatggtctttgtacaatgcatctaaaaggtgtaggattttatgcatcacaaaattgtaatactagaacgctatgtactggtagcatagggtcataatatttttaggtcgatcctaatgattcttttgtcccttttgaatttaggaaccgagctggtgggtacaccagactattgcgaactaggatacgagttggtgatgctgcaccgatggcatacattgagtaagcttctcttatgatttttaaaatggaaaattgatcagtgacctttccattgggttattagtcagttttttttttgcggggaattagtcagttttgttattcgcttacttttactttgtgtttgctattaaaaaattactaccatgccaccgacttgtttttgcccctgcttcacgtggaacaatcaactggttgagtataaaattcagcatcatgcagtgttttttaaatgaaagaagctagcgtgctaaaagcatcttcaaaccatgcaaagttttttttttctaaaatgctgagttttagctggctgtgccagaaatatatcatcatatcaaattcccagaaatcataacttgctgttttgcagcccaagtcactcgctgtcttcatctgcaggttcgttgatagggaaaatgaacttcgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccctgggccaagtctcgtgctagccaacagtgggcgggacctaaaatcagcgagggctctagaaaagaaggcttatgaaaataatattcatgtgttgagttccttgagactgtattcaattttctgtactaggctatgaggcaccagcttgtcattttggaggagttttgtcacgagatatattgtcaatagaataatttgaacttggctgcttacttttaacaaagcctgatgccctcatgagatgtgtatcatgtatgactgcaaatcattcattgagatatgaaatgcagaattatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0839300, RefSeq:Os01g0839300