Os01g0840100

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Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0840100| Description = Heat shock protein Hsp70 family protein| Version = NM_001051292.2 GI:297597935 GeneID:4327388| Length = 3566 bp| De...")
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Gene Name

Os01g0840100

Description

Heat shock protein Hsp70 family protein

Version

NM_001051292.2 GI:297597935 GeneID:4327388

Length

3566 bp

Definition

Oryza sativa Japonica Group Os01g0840100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37795553..37799118

Sequence Coding Region

37795692..37795902,37797082..37798817

Expression

GEO Profiles:Os01g0840100

Genome Context

<gbrowseImage1> name=NC_008394:37795553..37799118 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37795553..37799118 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaagggagagggcccggcgatcggcatcgacctcggcaccacctactcgtgcgtcggcgtgtggcagcacgaccgggtggagatcatcgccaacgaccaggggaaccgcaccacgccgtcgtatgtcgcgttcaccgactccgagcggctcatcggcgacgccgccaagaaccaggtcgccatgaaccccatcaacaccgtcttcgatgccaagcgactgataggtaggcggttctccgacccgtccgtgcagagtgacatgaagctgtggccgttcaaggtcatccctggccccggcgataagcctatgattgtggtgcagtacaagggcgaggagaagcagttctccgccgaggagatctcctccatggtgctcatcaagatgagggagatcgctgaagcctacctcggctccaacatcaagaacgccgtggtgactgtgccggcctacttcaacgactcgcagaggcaggccaccaaggacgccggtgtcattgccggcctcaacgtgatgcgcatcatcaacgagcccaccgccgcggccatcgcctacggtcttgacaagaaggccaccagctccggcgagaagaacgtgctcatcttcgatcttggcggtggcacgttcgatgtgtcgctgctcaccattgaggagggcattttcgaggtgaaggccactgctggtgacactcaccttggtggtgaggacttcgacaaccgcatggtgaaccatttcgtcctggagttcaagcgcaagaacaagaaggacatcagcggcaacccgcgtgctctgcgccggctgcgcacggcctgcgagcgcgccaagcgcacgctgtcgtcgaccgcacagaccaccattgagatcgactccctgtacgagggcatcgacttctactcgaccatcaccagggctcgcttcgaggagctcaacatggacctgttccgcaagtgcatggagccggtggagaagtgcctgcgcgacgccaagatggacaagagcagcgtgcacgacgtcgtgctcgtcggcggctccacccgcatccccaaggtgcagcagctgcttcaggacttcttcaacggcaaggagctgtgcaagagcatcaaccccgacgaggccgtggcatacggcgccgctgtccaggccgccatcctcagcggcgagggcaacgagaaggtgcaggacctgcttctgctcgacgtcacgccgctgtcgctggggctcgagacagcaggaggtgtcatgaccgtgctcatcccgaggaacaccaccatccccaccaagaaggagcaggtgttctcgacctactccgacaatcagcctggcgtcctgatccaggtgtacgagggtgagcgtgcccggaccaaggacaacaacctgctgggcaagttcgagctctccggcatccctccagctccccgcggcgtgccccagatcaccgtctgctttgacatcgacgccaatggcatcctcaacgtctctgccgaggacaagaccaccgggcagaagaacaagatcaccatcaccaacgacaagggcaggctgagcaaggaggagatcgagaagatggtgcaggaggcggagaagtacaaggcggaggacgaggagcacaagaagaaggtggacgccaagaacgcgctcgagaactacgcctacaacatgaggaacaccatcaaggacgacaagatcgcctccaagctctcggcggacgacaagaagaagatcgaggacgccatcgacggcgccatcaactggctcgacagcaaccagctcgcggaggcggacgagttcgaggacaagatgaaggagctggagagcatctgcaaccccatcatcgcgaagatgtaccagggcgccggcgcggacatgggcggcgccgctggcatggacgaggacgcgccggcgggtggcagcggtgcaggccccaagatcgaggaggtcgattaa</cdnaseq>

Protein Sequence

<aaseq>MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV AFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGD KPMIVVQYKGEEKQFSAEEISSMVLIKMREIAEAYLGSNIKNAVVTVPAYFNDSQRQA TKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIE EGIFEVKATAGDTHLGGEDFDNRMVNHFVLEFKRKNKKDISGNPRALRRLRTACERAK RTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKS SVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEK VQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEG ERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITI TNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDDKIASK LSADDKKKIEDAIDGAINWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGAGADMG GAAGMDEDAPAGGSGAGPKIEEVD</aaseq>

Gene Sequence

<dnaseqindica>140..350#1530..3265#aactctttgcaaaagaattccgagctcgcaaggcgaagaaatctcgcaacaatctcatcagatctcgagatctcatcaggtttggtttgttcccgtcggatttttcttttccactgttcgatcttcctgttcgtgcgagatggcgaagggagagggcccggcgatcggcatcgacctcggcaccacctactcgtgcgtcggcgtgtggcagcacgaccgggtggagatcatcgccaacgaccaggggaaccgcaccacgccgtcgtatgtcgcgttcaccgactccgagcggctcatcggcgacgccgccaagaaccaggtcgccatgaaccccatcaacaccgtcttcggtacgtgctcctgctatttcttccttttttttttgagctatcgttgttactagtccttttgcacgctctagttcgaatctagattgaactgtcatctggatggctggatgcattcgttattaagatgttcctgggttgcgctgatgttgatttcactccgaaacgaagacaaacattgtatctgtgctctgtttgggtgtgctaaattgctaatctcataaaaccaaagaataatgattatattaaacaagtatcatgcatttactacaactctcagggtctgtacttgaatggttgaacattgaaattgataggagttgctagttgtcaagaaattgataggagctgctaattgtcaagagattgaactgaacaatttaaacattgtatctatgctctgtttgggtgtgctaaattgctaatctcataaaaccaaagaataaggattatattaaacaagtatcatgcatttactgcaactctcagggtctgtacttgaatggttgaacattgaaattgataggagttgctagttgtcaagagattgaattgaacagtttgctagttgtacatgttacattttgttgcagtggtgcattttgttctatggaattttcgtctggaaattctgcttgttggctagttagtaatgcggtggtaaatcacagggagtaggcaactcatattctcgtggaatttgctttgagcgaaatatatacccacaatttgtttcgagtacattgcttactgattataaattaagctggctttactgcttgtgtgcctgctgtactctgctttagttataagctgaattttcatatgaattcaattgaacaatctgactcataatctcgttcgtcttgaaattctgcttgttggctagttagtaatgcggtggtaaatcacagggagtaggcaactcatattctcgtggaatttgctttgagcgaaatatatacccacaatttgtattagtacattgcttactgattgataaattaagctagctttactgcttgtcatgcctgctgtactctgctttacctgtaagatgaatttttaagctggctttactgcttgtcatgcctgctgtgctctgctttacctgtaagctgaattttcatatgaattcaattgaacaatctgactcataatctcgttcaattttgaatgcagatgccaagcgactgataggtaggcggttctccgacccgtccgtgcagagtgacatgaagctgtggccgttcaaggtcatccctggccccggcgataagcctatgattgtggtgcagtacaagggcgaggagaagcagttctccgccgaggagatctcctccatggtgctcatcaagatgagggagatcgctgaagcctacctcggctccaacatcaagaacgccgtggtgactgtgccggcctacttcaacgactcgcagaggcaggccaccaaggacgccggtgtcattgccggcctcaacgtgatgcgcatcatcaacgagcccaccgccgcggccatcgcctacggtcttgacaagaaggccaccagctccggcgagaagaacgtgctcatcttcgatcttggcggtggcacgttcgatgtgtcgctgctcaccattgaggagggcattttcgaggtgaaggccactgctggtgacactcaccttggtggtgaggacttcgacaaccgcatggtgaaccatttcgtcctggagttcaagcgcaagaacaagaaggacatcagcggcaacccgcgtgctctgcgccggctgcgcacggcctgcgagcgcgccaagcgcacgctgtcgtcgaccgcacagaccaccattgagatcgactccctgtacgagggcatcgacttctactcgaccatcaccagggctcgcttcgaggagctcaacatggacctgttccgcaagtgcatggagccggtggagaagtgcctgcgcgacgccaagatggacaagagcagcgtgcacgacgtcgtgctcgtcggcggctccacccgcatccccaaggtgcagcagctgcttcaggacttcttcaacggcaaggagctgtgcaagagcatcaaccccgacgaggccgtggcatacggcgccgctgtccaggccgccatcctcagcggcgagggcaacgagaaggtgcaggacctgcttctgctcgacgtcacgccgctgtcgctggggctcgagacagcaggaggtgtcatgaccgtgctcatcccgaggaacaccaccatccccaccaagaaggagcaggtgttctcgacctactccgacaatcagcctggcgtcctgatccaggtgtacgagggtgagcgtgcccggaccaaggacaacaacctgctgggcaagttcgagctctccggcatccctccagctccccgcggcgtgccccagatcaccgtctgctttgacatcgacgccaatggcatcctcaacgtctctgccgaggacaagaccaccgggcagaagaacaagatcaccatcaccaacgacaagggcaggctgagcaaggaggagatcgagaagatggtgcaggaggcggagaagtacaaggcggaggacgaggagcacaagaagaaggtggacgccaagaacgcgctcgagaactacgcctacaacatgaggaacaccatcaaggacgacaagatcgcctccaagctctcggcggacgacaagaagaagatcgaggacgccatcgacggcgccatcaactggctcgacagcaaccagctcgcggaggcggacgagttcgaggacaagatgaaggagctggagagcatctgcaaccccatcatcgcgaagatgtaccagggcgccggcgcggacatgggcggcgccgctggcatggacgaggacgcgccggcgggtggcagcggtgcaggccccaagatcgaggaggtcgattaagctggtggtggtcctacgtgattccggctggaagggagtctgaaccgtgtgatgtggctggcgtcgtgtgatcccctgtgttttttagccgtcgagagtttcgtgcgatgaagcttttgtaagtgtgtatcgccgtatggttttacctgaacttgctctgaaatagtttaagctttgacctaaatcgctctgtctctctctttttgtgcggcttgcggcttgcctgcttcacgagttcgttcggtcgcagtttcagacagaggattagccgcaagtttgttctattgcccttatcttttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0840100, RefSeq:Os01g0840100