Os01g0840200

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Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0840200| Description = HSP20-like chaperone domain containing protein| Version = NM_001051293.1 GI:115440956 GeneID:4327389| Length = 2339 ...")
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Gene Name

Os01g0840200

Description

HSP20-like chaperone domain containing protein

Version

NM_001051293.1 GI:115440956 GeneID:4327389

Length

2339 bp

Definition

Oryza sativa Japonica Group Os01g0840200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37800029..37802367

Sequence Coding Region

37800329..37801894

Expression

GEO Profiles:Os01g0840200

Genome Context

<gbrowseImage1> name=NC_008394:37800029..37802367 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37800029..37802367 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggaagacctcgtcaccaccctgtccatggagaacggcggcggtggcggtggcggtggccaccacagcctctgcacccttctctccatggatcccgccggccacctcgacgaccgcgccgtcggggtcatggtgcagccccgcatcggggacggcgccgggcgcgcccacgccgtgtcgctctccggcgcgcatccgccggacatcaaccagccgtggcagactgacctctgcgacatgctcgacgtcagcctcggcccgcagattcaggtgtacgacgccgaggcgctcgccgtgctgagcagtgccccgaaggctgggaaccgcaaggccgccaagcgcggggacagcatctggggcgcctggttcttcttcacgttctacttcaagcccctgctcgcggacaagtgcaaaggcaaggtcacccgggatgccaacggtgtgtcagggtttgacaagacggatctccggctcgacatgttcatggtgcagcacgacatggagaacatgtacatgtgggtcttcaaggagcggccggagaatgcccttggcaagatgcagctgaggagctacatgaacgggcactcccgccctggtgagccgcaattcccgttcagcgttgacaggggatttgtgcgatcacaccggatgcagcgcaagcactaccgtggactctcaaacccacagtgtattcatggaattgaggtggtgagatcaccaaatcttgcaagcataactgaggtagacaggaggaggtgggtggagcttacagggagggagctcaatttcgcaatcccgcaggaggcctgtgattttgggacatggaggactatgccaaacacagagattgagcttgacaggccacatcctgtcatgaagggcaacgttcatcaacacccaaagaagctgcttaatggatctggcttgaatttgtcatcaccctccaatcactcaggagaagatggcatggatctctccccagttagcagcaagcgcaggaaggaggtgtttccgcatgccatggatgaggaatgcttcttgccactcaactcttgcggcgagaggacacaacaagatgtggagatgcattcagtagtgcagccttcatggcagcacgaattttctggggtgatgaaaaaggctcgcgggcctgtgactgccgccaagtcgatttatgaagatgaccaaggctacttgataatggtcagcttaccatttgttgatcagcagaaggtgaaagtttcatggaggaacagtcttactcatggtatagtaaagatcctttgtgttagtacagcccagacgccatacatcagaaggcatgacagggtattcaagcttgctgatcctatgcctgagcactgccctcatggggaatttgtccgtgaaatacctctagcaactcgcatccctgaagacgctaagctagaagcatactttgatgaggccgctgcagtgcttgagatcatggttcccaaacgtggaaatgagccagaagaacatgaagtaagagtctctatgcgcccccctcaccttgcagctaacgatctactcctgacataa</cdnaseq>

Protein Sequence

<aaseq>MGEDLVTTLSMENGGGGGGGGHHSLCTLLSMDPAGHLDDRAVGV MVQPRIGDGAGRAHAVSLSGAHPPDINQPWQTDLCDMLDVSLGPQIQVYDAEALAVLS SAPKAGNRKAAKRGDSIWGAWFFFTFYFKPLLADKCKGKVTRDANGVSGFDKTDLRLD MFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRPGEPQFPFSVDRGFVRSHRM QRKHYRGLSNPQCIHGIEVVRSPNLASITEVDRRRWVELTGRELNFAIPQEACDFGTW RTMPNTEIELDRPHPVMKGNVHQHPKKLLNGSGLNLSSPSNHSGEDGMDLSPVSSKRR KEVFPHAMDEECFLPLNSCGERTQQDVEMHSVVQPSWQHEFSGVMKKARGPVTAAKSI YEDDQGYLIMVSLPFVDQQKVKVSWRNSLTHGIVKILCVSTAQTPYIRRHDRVFKLAD PMPEHCPHGEFVREIPLATRIPEDAKLEAYFDEAAAVLEIMVPKRGNEPEEHEVRVSM RPPHLAANDLLLT</aaseq>

Gene Sequence

<dnaseqindica>474..2039#cttccccttttctcccacctcgccgcgcacccctcccctccccatgtcctcgccttcctccccgcgctcttgctcccgcagcttcacgcttcccccgcactagtacagactcctgatggtggtggaggtaaacctcggcggctaacccatcgtccaccgcgcgcggcggctctgtttttggtttgggcggcattttggtctccttgggggtgtggatttgggttgggggggaggagagctgggtgaagatttgtggcggaaactgttgggggggaattgatggtgggattcatggagtgcgtgcacgattggttgctgtgggacgccgtcctggaatgcggagggatccggaggccaccgattagatagcggccgggggaggagggagaggagaggagagaggagcaggcggtggcagaggcggaggccgtcgccattagcaccagtcaccccgaggcgcgagtcaccaagccatgggggaagacctcgtcaccaccctgtccatggagaacggcggcggtggcggtggcggtggccaccacagcctctgcacccttctctccatggatcccgccggccacctcgacgaccgcgccgtcggggtcatggtgcagccccgcatcggggacggcgccgggcgcgcccacgccgtgtcgctctccggcgcgcatccgccggacatcaaccagccgtggcagactgacctctgcgacatgctcgacgtcagcctcggcccgcagattcaggtgtacgacgccgaggcgctcgccgtgctgagcagtgccccgaaggctgggaaccgcaaggccgccaagcgcggggacagcatctggggcgcctggttcttcttcacgttctacttcaagcccctgctcgcggacaagtgcaaaggcaaggtcacccgggatgccaacggtgtgtcagggtttgacaagacggatctccggctcgacatgttcatggtgcagcacgacatggagaacatgtacatgtgggtcttcaaggagcggccggagaatgcccttggcaagatgcagctgaggagctacatgaacgggcactcccgccctggtgagccgcaattcccgttcagcgttgacaggggatttgtgcgatcacaccggatgcagcgcaagcactaccgtggactctcaaacccacagtgtattcatggaattgaggtggtgagatcaccaaatcttgcaagcataactgaggtagacaggaggaggtgggtggagcttacagggagggagctcaatttcgcaatcccgcaggaggcctgtgattttgggacatggaggactatgccaaacacagagattgagcttgacaggccacatcctgtcatgaagggcaacgttcatcaacacccaaagaagctgcttaatggatctggcttgaatttgtcatcaccctccaatcactcaggagaagatggcatggatctctccccagttagcagcaagcgcaggaaggaggtgtttccgcatgccatggatgaggaatgcttcttgccactcaactcttgcggcgagaggacacaacaagatgtggagatgcattcagtagtgcagccttcatggcagcacgaattttctggggtgatgaaaaaggctcgcgggcctgtgactgccgccaagtcgatttatgaagatgaccaaggctacttgataatggtcagcttaccatttgttgatcagcagaaggtgaaagtttcatggaggaacagtcttactcatggtatagtaaagatcctttgtgttagtacagcccagacgccatacatcagaaggcatgacagggtattcaagcttgctgatcctatgcctgagcactgccctcatggggaatttgtccgtgaaatacctctagcaactcgcatccctgaagacgctaagctagaagcatactttgatgaggccgctgcagtgcttgagatcatggttcccaaacgtggaaatgagccagaagaacatgaagtaagagtctctatgcgcccccctcaccttgcagctaacgatctactcctgacataaccagtggaaggtctatcaaccatatagtcttgtttctgaccaccagatcaatgcccaaacatggctgagaaggtatgagcatgactgtgttgggagttttgctttctgagtatttgtcgtactgcactaggcctcttcagcgaagtctgctgaaggctactcagtttgttctagtatgttatgatgggtgtctttttagccctcatgctcttctcctttgtagaatatggctagattgctttttctagaatttgtactgtgttgaattaaccagaaataaattgtctgaattactattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0840200, RefSeq:Os01g0840200