Os01g0842400

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0842400| Description = Similar to Laccase (EC 1.10.3.2)| Version = NM_001051307.1 GI:115440984 GeneID:4327500| Length = 3008 bp| Definitio...")
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Gene Name

Os01g0842400

Description

Similar to Laccase (EC 1.10.3.2)

Version

NM_001051307.1 GI:115440984 GeneID:4327500

Length

3008 bp

Definition

Oryza sativa Japonica Group Os01g0842400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37921779..37924786

Sequence Coding Region

37921994..37922124,37922230..37923204,37923705..37923833,37923991..37924235,37924318..37924469
,37924570..37924677

Expression

GEO Profiles:Os01g0842400

Genome Context

<gbrowseImage1> name=NC_008394:37921779..37924786 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37921779..37924786 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccatggctatctcctctgctcttcctagccctctactcttggcggcttccctactgcttctcatcgtccaagctcagggcatcactaggcactacgaattcaatgtgcaaatggcgaacgcgacgaggctgtgcaacaccaagagcatggtgacggtgaacgggcagtgccccgggccggagctggtggcgagggaaggcgaccgcgtcgtcatccgcgtcaccaacaacgtcgcgcacaacatctcgttgcactggcacggcgtccggcaggtgcggaccgggtgggcggacgggccggcgtacatcacgcagtgcccgatccagacggggcagagctacgtgtacaacttcacggtggccgggcagcgcggcaccctgtggtggcacgcccacatctcctggctccgcgccaccgtctacggcgccctcgtcatcctccccaagctcggcgtcccctaccccttccccgccccgcacaaggaggtccccgtcatcttcggcgagtggtggaacgcggacacggaggaggtggtcaaccaggcggtccagaccggcggaggcccgaacgtctccgacgccttcaccatcaacggcctccccggccctctctacaactgctctgcccaagacacgttcaagctgaaggtgaaacccgggaaaacgtacatgctgcgcctcatcaacgccgcgctcaacgaggagctcttcttcgccgtcgccaaccacacgctcaccgtcgtcgaggtcgacgccgtctacgtcaagccgttcaccgtcgacaccctggtgatctcgccggggcagaccaccaacgtgctcctcaccgccaagccgtactaccccggcgccaacttctacatgtccgccgcgccctactccaccgccaggcctgggaccttcggcaacacgaccgtcgccggcatcctcgagtacgagaaccccgccatgtcgccctccgcggcgagcttcgtcaagggcttgccgctgttcaagccgacgctgccgcagctcaacgacaccgacttcgtcaccaacttcaccgacaagctccgtagcctcgcgacgccggagtacccggcggccgtgccgcagtcggttgacaagcgattcttcttcacggtcgggctgggcacgctgccgtgcccggcgaacatgacctgccagggccccaacaacacgcagatggcggcgtccatgaacaacgtctccttcgtgctcccggcgagggcgctgctgcagtcccacttcaccggactctccagcggcgtgtacgcgccggacttccccgtcgcgccgctgtcgccgttcaactacacggggacgccgccgaacaacaccaacgtgaagaccgggaccaagctgctggtgctgcggtacaacacgtcggtggagctggtgatgcaggacaccagcatcctgggcatcgagagccacccgctgcacctgcacggcttcaacttcttcgtgatcggccaagggttcggcaactacgacgccgtgaacgacccggccaagttcaacctcgtcgaccccgtcgagcgcaacaccgtcggcgtgccggccggcggatgggtggccatccgtttcctcgctgacaacccaggtgtatggttcatgcactgtcatttggaggcgcacacgacgtggggcctgaggatggcatggctagtgttggatgggagccatccgaaccagaagctgcttcctccgccgtccgatctgcccaaatgctag</cdnaseq>

Protein Sequence

<aaseq>MTMAISSALPSPLLLAASLLLLIVQAQGITRHYEFNVQMANATR LCNTKSMVTVNGQCPGPELVAREGDRVVIRVTNNVAHNISLHWHGVRQVRTGWADGPA YITQCPIQTGQSYVYNFTVAGQRGTLWWHAHISWLRATVYGALVILPKLGVPYPFPAP HKEVPVIFGEWWNADTEEVVNQAVQTGGGPNVSDAFTINGLPGPLYNCSAQDTFKLKV KPGKTYMLRLINAALNEELFFAVANHTLTVVEVDAVYVKPFTVDTLVISPGQTTNVLL TAKPYYPGANFYMSAAPYSTARPGTFGNTTVAGILEYENPAMSPSAASFVKGLPLFKP TLPQLNDTDFVTNFTDKLRSLATPEYPAAVPQSVDKRFFFTVGLGTLPCPANMTCQGP NNTQMAASMNNVSFVLPARALLQSHFTGLSSGVYAPDFPVAPLSPFNYTGTPPNNTNV KTGTKLLVLRYNTSVELVMQDTSILGIESHPLHLHGFNFFVIGQGFGNYDAVNDPAKF NLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGSHPN QKLLPPPSDLPKC</aaseq>

Gene Sequence

<dnaseqindica>2663..2793#1583..2557#954..1082#552..796#318..469#110..217#aacattcattccatccttgccaggccatctcccactcaaagtctcacagagctagctgatcaagagccattacagattgtggctcaaagcttaggctacacaaattaagatgaccatggctatctcctctgctcttcctagccctctactcttggcggcttccctactgcttctcatcgtccaagctcagggcatcactaggcactacgaattcaatgtatgcctgcacacgcatagccaatgcaaagtgatctcgccttgatgaaaaacttaattgattgattgattgattgatcgatcgatcgatctgcatgcaggtgcaaatggcgaacgcgacgaggctgtgcaacaccaagagcatggtgacggtgaacgggcagtgccccgggccggagctggtggcgagggaaggcgaccgcgtcgtcatccgcgtcaccaacaacgtcgcgcacaacatctcgttgcactggtaagccaccgtaccgatcgatacgattcctcacgctttagttttttgatccgatcgatggtgcattcgtgcgtacgtgcaggcacggcgtccggcaggtgcggaccgggtgggcggacgggccggcgtacatcacgcagtgcccgatccagacggggcagagctacgtgtacaacttcacggtggccgggcagcgcggcaccctgtggtggcacgcccacatctcctggctccgcgccaccgtctacggcgccctcgtcatcctccccaagctcggcgtcccctaccccttccccgccccgcacaaggaggtccccgtcatcttcggtacgtacgtacgcacgctgcacgcattacgtcgtcgtacgacgtcgcgcatcgcgtcggtttgcacgcaacgtcgcgacatatatgcatacttactgatcattgcatgatcaggggctcgctaccttttaatttgattgttgcgtttgtcgcgtaggcgagtggtggaacgcggacacggaggaggtggtcaaccaggcggtccagaccggcggaggcccgaacgtctccgacgccttcaccatcaacggcctccccggccctctctacaactgctctgcccaaggtacgtgcatttcgcccggttaaccacaaattaataaccttttttttttgtttccaagaaaaaaaacagagacaaacgttaccgtgcacgagtactgtgcttcctcctgcatcttttttggcgcgtgagagaattcggctccggaggttggtaacagatcaaatcaccaaaggtggacggagaagattccgtgttcctttctcgtaacggagatgcatgggattgtgcatttgttgctccgaattaatgcggtgtgtcactgtcgtgggatctgagcgtggtactcgacctaacatttttggtccattggaaaagcaaactctgttattgggtccggctggtgtcacgtaaacaaaatcttagttgcgacatagctaggggagctaggtgcgctttccattcatgcacgtcgccgtcgaagaatttagctggtgattagtgaatattgaaacgtgctgactctggttaccgttggcatgcgtgcgtgcgcgtggatgcagacacgttcaagctgaaggtgaaacccgggaaaacgtacatgctgcgcctcatcaacgccgcgctcaacgaggagctcttcttcgccgtcgccaaccacacgctcaccgtcgtcgaggtcgacgccgtctacgtcaagccgttcaccgtcgacaccctggtgatctcgccggggcagaccaccaacgtgctcctcaccgccaagccgtactaccccggcgccaacttctacatgtccgccgcgccctactccaccgccaggcctgggaccttcggcaacacgaccgtcgccggcatcctcgagtacgagaaccccgccatgtcgccctccgcggcgagcttcgtcaagggcttgccgctgttcaagccgacgctgccgcagctcaacgacaccgacttcgtcaccaacttcaccgacaagctccgtagcctcgcgacgccggagtacccggcggccgtgccgcagtcggttgacaagcgattcttcttcacggtcgggctgggcacgctgccgtgcccggcgaacatgacctgccagggccccaacaacacgcagatggcggcgtccatgaacaacgtctccttcgtgctcccggcgagggcgctgctgcagtcccacttcaccggactctccagcggcgtgtacgcgccggacttccccgtcgcgccgctgtcgccgttcaactacacggggacgccgccgaacaacaccaacgtgaagaccgggaccaagctgctggtgctgcggtacaacacgtcggtggagctggtgatgcaggacaccagcatcctgggcatcgagagccacccgctgcacctgcacggcttcaacttcttcgtgatcggccaagggttcggcaactacgacgccgtgaacgacccggccaagttcaacctcgtcgaccccgtcgagcgcaacaccgtcggcgtgccggccggcggatgggtggccatccgtttcctcgctgacaacccaggtgagttagttagttagttatctctgcaattagtgtacgtgaaattcgtcttagatatagtactaccctgctaataatttttgttgtgcaattatgtgcgtgcaggtgtatggttcatgcactgtcatttggaggcgcacacgacgtggggcctgaggatggcatggctagtgttggatgggagccatccgaaccagaagctgcttcctccgccgtccgatctgcccaaatgctagtcgggaccttaccacagatgccgttgattcttctttcctcatttcatttgttcgccaatttgcgattgctttctcctgaaggagattttagtgtgttagcccgttcttagctaacttttgtgacattattttgttcttttttcttttatttgtgtacaactatacaatgacactgttttgatgcttctttgaataaaaaaatgggcattaattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0842400, RefSeq:Os01g0842400