Os01g0842500

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0842500| Description = Similar to Laccase (EC 1.10.3.2)| Version = NM_001051308.1 GI:115440986 GeneID:4327501| Length = 2836 bp| Definitio...")
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Gene Name

Os01g0842500

Description

Similar to Laccase (EC 1.10.3.2)

Version

NM_001051308.1 GI:115440986 GeneID:4327501

Length

2836 bp

Definition

Oryza sativa Japonica Group Os01g0842500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37933139..37935974

Sequence Coding Region

37933535..37933665,37933815..37934786,37934873..37935001,37935123..37935367,37935492..37935643
,37935790..37935894

Expression

GEO Profiles:Os01g0842500

Genome Context

<gbrowseImage1> name=NC_008394:37933139..37935974 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37933139..37935974 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctatctcctaccttctccgttcctccatcctcgccgtcgccgcgctactgctcttctccgtcaacctggccaagggcgacattagggaataccaattcgatgtgaaaacgacgaacgtgacacggctgtgcagcagcaagagcatcgtgacggtgaacgggcagttcccggggccgactgtgttcgcgagggaaggcgacctcgtcgtcatccgggtcatcaaccactccccctacaacatgagcatccactggcacggcatccggcagctgcggagcgggtgggcggacgggccggcgtacatcacgcagtgcccgatccagccgggcggcagctacgtgtacaagtacaccatcaccgggcagcgcggcacgctgtggtggcacgcgcacatctcctggctccgcgccaccgtgtacggccccatcatcatcctccccaaggccggcgtcccctacccgttcccggcgccggacaaggaggtccccgtcgtcttcggcgagtggtggaaggcggacacggaggcggtgataagccaggcgacgcagaccggcggaggcccgaacgtctccgacgcgttcaccatcaatggcctccctgggccgctctacaactgctctgccaaagatacgttcaagctgaaggtggaggccgggaagacgtacatgctgcggctcatcaacgctgcgctcaatgacgagctcttcttctccatcgccgggcacacgctcaccgtggtcgacgtcgacgcggtctacgtcaagccattcaccgtggacaccctcctcatcaccccgggccagaccaccaacgtgctcctcaccaccaagccgtcgtaccccggtgcgacgttctacatgctggcggcgccatactccacggcgatgtccggcacgttcgacaacaccaccgtcgcgggaatcctcgagtacgaggaccccagctcccactccaccgcggcgttcaacaagaacctcccggtgctcaggcccaccctgccgcagatcaacgacaccagcttcgtctccaactacaccgcaaagctccgcagcttcgccacggcggagtacccggcgaacgtgccgcagcaggtggacacgcggttcttcttcaccgtcggcctgggcacgcacccctgcgccgtgaacgggacgtgccagggtcccaacgggagccggttcgcggcggccgtgaacaacgtctccttcgtgctcccctccacggcgctgctgcagtcgcactacaccggcaggtccaacggggtgtacgcctccaacttcccggccatgccgctgtcgccgttcaactacaccgggacgccgccgaacaacaccaacgtgtccaacgggacgaggctggtcgtgctcccgtacggcgcgtcggtcgagctggtgatgcagggcaccagcgtccttggcgccgagagccacccgttccacctgcacggcttcaacttcttcgtcgtcggccaagggttcggcaacttcgaccccgtgaacgacccggccaagtacaacctcgtcgaccccgtcgagcgcaacaccgtcggcgtgccggcggccggctgggttgccattcgcttcctcgtggacaatccaggggtatggttcatgcattgccacttggaggtgcacgtcagctggggcctgaagatggcatgggtggtgcaggacgggagcctacccaaccagaagatcctccctccgccgtccgatctccccaaatgctaa</cdnaseq>

Protein Sequence

<aaseq>MAISYLLRSSILAVAALLLFSVNLAKGDIREYQFDVKTTNVTRL CSSKSIVTVNGQFPGPTVFAREGDLVVIRVINHSPYNMSIHWHGIRQLRSGWADGPAY ITQCPIQPGGSYVYKYTITGQRGTLWWHAHISWLRATVYGPIIILPKAGVPYPFPAPD KEVPVVFGEWWKADTEAVISQATQTGGGPNVSDAFTINGLPGPLYNCSAKDTFKLKVE AGKTYMLRLINAALNDELFFSIAGHTLTVVDVDAVYVKPFTVDTLLITPGQTTNVLLT TKPSYPGATFYMLAAPYSTAMSGTFDNTTVAGILEYEDPSSHSTAAFNKNLPVLRPTL PQINDTSFVSNYTAKLRSFATAEYPANVPQQVDTRFFFTVGLGTHPCAVNGTCQGPNG SRFAAAVNNVSFVLPSTALLQSHYTGRSNGVYASNFPAMPLSPFNYTGTPPNNTNVSN GTRLVVLPYGASVELVMQGTSVLGAESHPFHLHGFNFFVVGQGFGNFDPVNDPAKYNL VDPVERNTVGVPAAGWVAIRFLVDNPGVWFMHCHLEVHVSWGLKMAWVVQDGSLPNQK ILPPPSDLPKC</aaseq>

Gene Sequence

<dnaseqindica>2310..2440#1189..2160#974..1102#608..852#332..483#81..185#atcgatctcaaacacattcatagcccattagccgacgagagctctcagtgtacgtaagtcgagagctcgaggaggcatccatggctatctcctaccttctccgttcctccatcctcgccgtcgccgcgctactgctcttctccgtcaacctggccaagggcgacattagggaataccaattcgatgtgagtcgctgtcctctgtttcttctttgttttctttacgttcgatgcatgcatgatcgagagaaccaacttgcatgcatgcgtggcaatagtgtaatggtacgttaattgcgatgtgtttgtgcgtatggtgtgtacgtgtgcaggtgaaaacgacgaacgtgacacggctgtgcagcagcaagagcatcgtgacggtgaacgggcagttcccggggccgactgtgttcgcgagggaaggcgacctcgtcgtcatccgggtcatcaaccactccccctacaacatgagcatccactggtacgcacacacccgcgcgcacgcacgcttcaccgtttgatcgatcagttttccggtgcaaaattttaccgatcgagctcatcactgcgcattgtgacgatcgatcgatcgatcgatgatgcaggcacggcatccggcagctgcggagcgggtgggcggacgggccggcgtacatcacgcagtgcccgatccagccgggcggcagctacgtgtacaagtacaccatcaccgggcagcgcggcacgctgtggtggcacgcgcacatctcctggctccgcgccaccgtgtacggccccatcatcatcctccccaaggccggcgtcccctacccgttcccggcgccggacaaggaggtccccgtcgtcttcggtatgtaatgatcgacgacagacgtactgtcgcgtggcgtgggtctgtacgtaagcgtaacaaacatggcgactgatcagtgatcaggggttaaattgcgtttgttttgtttgggtggtaggcgagtggtggaaggcggacacggaggcggtgataagccaggcgacgcagaccggcggaggcccgaacgtctccgacgcgttcaccatcaatggcctccctgggccgctctacaactgctctgccaaaggtggtgcactgtgctgtacacttgcagctataagctagctagctagtacattttgattatacgcatacgcattgtgtggcatgcagatacgttcaagctgaaggtggaggccgggaagacgtacatgctgcggctcatcaacgctgcgctcaatgacgagctcttcttctccatcgccgggcacacgctcaccgtggtcgacgtcgacgcggtctacgtcaagccattcaccgtggacaccctcctcatcaccccgggccagaccaccaacgtgctcctcaccaccaagccgtcgtaccccggtgcgacgttctacatgctggcggcgccatactccacggcgatgtccggcacgttcgacaacaccaccgtcgcgggaatcctcgagtacgaggaccccagctcccactccaccgcggcgttcaacaagaacctcccggtgctcaggcccaccctgccgcagatcaacgacaccagcttcgtctccaactacaccgcaaagctccgcagcttcgccacggcggagtacccggcgaacgtgccgcagcaggtggacacgcggttcttcttcaccgtcggcctgggcacgcacccctgcgccgtgaacgggacgtgccagggtcccaacgggagccggttcgcggcggccgtgaacaacgtctccttcgtgctcccctccacggcgctgctgcagtcgcactacaccggcaggtccaacggggtgtacgcctccaacttcccggccatgccgctgtcgccgttcaactacaccgggacgccgccgaacaacaccaacgtgtccaacgggacgaggctggtcgtgctcccgtacggcgcgtcggtcgagctggtgatgcagggcaccagcgtccttggcgccgagagccacccgttccacctgcacggcttcaacttcttcgtcgtcggccaagggttcggcaacttcgaccccgtgaacgacccggccaagtacaacctcgtcgaccccgtcgagcgcaacaccgtcggcgtgccggcggccggctgggttgccattcgcttcctcgtggacaatccaggtgagaatcattgcattattgcaacattttattgattttttttattcttacattgcatttctgatcaataagcgagaaaacagatttggctgcgcacacatgagttgaaatttgcaactaattcgctacttttgcttggacgtgtgcaggggtatggttcatgcattgccacttggaggtgcacgtcagctggggcctgaagatggcatgggtggtgcaggacgggagcctacccaaccagaagatcctccctccgccgtccgatctccccaaatgctaaccgatcgacaccggccgaccagagacagagattgcgtcttgctcatcagcttccctgtaggatactcggatactcctctgcttttgctagcttgcttctgttgattgctcgcggttggtgctatggaatgcttttcttgtagtggtgtgcctttccgaagttgtgtcgtcatctggttagctgatgtacgaatgatcatgggcaagtttcttgatcagacgcaaggcctttaattttgggcttctcattattatttgtcaccttttgtaacatatgagggagctggatcataaatccacgttcatcccaataatttgtaccatcatttgatgtacggcaaaggatttttttatgtactatttcatattaatcaatgtttgttatattgttttggag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0842500, RefSeq:Os01g0842500