Os10g0517400

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Revision as of 08:45, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0517400| Description = Aldo/keto reductase family protein| Version = NM_001071603.1 GI:115482949 GeneID:4349122| Length = 3383 bp| Definit...")
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Gene Name

Os10g0517400

Description

Aldo/keto reductase family protein

Version

NM_001071603.1 GI:115482949 GeneID:4349122

Length

3383 bp

Definition

Oryza sativa Japonica Group Os10g0517400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:20453075..20456457

Sequence Coding Region

20453162..20453308,20454423..20454651,20454760..20454853,20455037..20455160,20455361..20455462
,20455542..20455693,20455792..20455885,20456081..20456266

Expression

GEO Profiles:Os10g0517400

Genome Context

<gbrowseImage1> name=NC_008403:20453075..20456457 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:20453075..20456457 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctgccggtgaccaccagggcggcgccggcgatgcccttcgcgccgcagccgcgcaccgccggcggcggcctcctccggcgaccgtcgccgcctgccgccgcgctgcgcatcgcgccgcccctcttctggccgtggcagaaggtgaaagtcggtcccctttctgtttcgcctatgggatttggaacatgggcttgggggaaccagctactttggggatatcaagaaagcatggatactgaacttcaggagtgtttcaatttggctctgaagaatggcataaacctttttgacactgctgactcttatggaactggaaggttgaatggtcagagcgaaaggctcctcggtaaatttatccgcgagtatgaagggccgatgaagtcccctgatgatgtgatcattgcaaccaagtttgcagcatatccttggcggctaacatcaggccaatttgtcagcgcctgcaagtcttctttggaaagattgcagcttgatcggctcgggataggacagctgcattggtctactgctaactatgcacctctgcaggagcgtgctctttgggatggtctagttgagatgtatgaaaagggtttggttcgtgctgtcggcgtcagcaattatgggcccaagcagcttctgaagatccacagccatctatcatctagaggtgttccattgagctcagctcaggttcagttctcactactgagcatgggggatgagcagatggagctgaaaactgtgtgtgattctttgggcattcgtctgattgcttatagtccacttggattaggaatgctgacaggaaagtatactacttctaaccttccaagtggaccaaggtctgtgttgttccggcaaattcttcctgggttggaatctctgctgacttgtctgaaaagaattgcagaaaggaaggggaagaccatgtctcaagtggccataaattggtgcatctgcaagggcacaattcctattccaggtgtcaaaacagtcaggcacgtcgaggataacttgggagcactgggctggaggcttagccctgctgaagtttcagagctcgaagctgcagcaatggagtctccgaagagaatggtccagaacatattccaaactgcatga</cdnaseq>

Protein Sequence

<aaseq>MALPVTTRAAPAMPFAPQPRTAGGGLLRRPSPPAAALRIAPPLF WPWQKVKVGPLSVSPMGFGTWAWGNQLLWGYQESMDTELQECFNLALKNGINLFDTAD SYGTGRLNGQSERLLGKFIREYEGPMKSPDDVIIATKFAAYPWRLTSGQFVSACKSSL ERLQLDRLGIGQLHWSTANYAPLQERALWDGLVEMYEKGLVRAVGVSNYGPKQLLKIH SHLSSRGVPLSSAQVQFSLLSMGDEQMELKTVCDSLGIRLIAYSPLGLGMLTGKYTTS NLPSGPRSVLFRQILPGLESLLTCLKRIAERKGKTMSQVAINWCICKGTIPIPGVKTV RHVEDNLGALGWRLSPAEVSELEAAAMESPKRMVQNIFQTA</aaseq>

Gene Sequence

<dnaseqindica>88..234#1349..1577#1686..1779#1963..2086#2287..2388#2468..2619#2718..2811#3007..3192#gaggggatttttatcaagagatttaacggacgagaacgcgccgcccaaattccgcgcctcgtcgacctcggctccggccaccgatcgatggctctgccggtgaccaccagggcggcgccggcgatgcccttcgcgccgcagccgcgcaccgccggcggcggcctcctccggcgaccgtcgccgcctgccgccgcgctgcgcatcgcgccgcccctcttctggccgtggcagaaggtcccattcgcaacaaacccctcttgatacctgcatgattacactagttaaattagtctagttcaaattctgctgcacttcttggagatttgcacggccagttcgtgtgctgtgaaagcttaactctaccgtgttgtcttcttaattaaggaggcaaactgttttggtgagcttgtagccatgtacagtagaactcaagctgcagttttttttttttcttcttcaagacagtactgctactacattcaaggctggaacagagccacagtagcttttgctcgggaggccctgcagtaggtttactgattttgtgacatgacatgagctaaatgtactacaactttgccattaaacaagaacgcaaagtaaatgaggcaccagtacaagcctcatgttctgtctgaatgtgcacaacttttactgaccgtagatttcgtgcctccttgagcacaaaccacaagaaggatccgatgaccatgctctctctcccctaccatggagctatctctagcaaagaaccaggaatgtgattagattagtagcactgacagtctgctcctttttggtaaccagctatggatcaaacgaaaattatttgttaatgtttatcactgatgctttcgttcctctttatcgaagtcgagcacggaaacccaaaagttccacgctgtgtgatttctgttggaaataacgagctagatgcatggcacaagtttgctgttgttgccatgcatgggctgtgcttattttactcaagatgactggaaagctactgacattgtgttcgtagactagaattagttgatgctatctgacaagaggaaaaatcaagagcaggatattggcccaacaagctttgtattcgcccctaaccaaattctgtcgaacaactgacacattgaaattcagactttctgaaagtttcaagtaggatcggcatgctaagccaaattgtcaaatgtgcatcttgttgtgctcatgtttcagtctgaagtatgaaccataacatgttacagtttctgaagaattagatgttatcactagtacatgaagttttcattcataattgatcagtgaaatcctttgaaggttatatttttgttgataaatataggtgaaagtcggtcccctttctgtttcgcctatgggatttggaacatgggcttgggggaaccagctactttggggatatcaagaaagcatggatactgaacttcaggagtgtttcaatttggctctgaagaatggcataaacctttttgacactgctgactcttatggaactggaaggttgaatggtcagagcgaaaggctcctcggtaaatttatccgcgagtatgaaggttagcctagctagtaattcagaataatttcttaaattatgggatagtgtttctttggggggagtttgtctagttgaaatgacttcattttccctttttgtatgacagggccgatgaagtcccctgatgatgtgatcattgcaaccaagtttgcagcatatccttggcggctaacatcaggccaatttgtcagcgcctgcaagtattcttccaatttgtttgcttaatgtacatgaaccatatttcagcttgttccgtgaaatttttactccatccaccaaccacgaatgtgctgaaaaacatagagctaactgaatattgaacatataactgatacctataggcctctagcgtttaggtgacttacatcagtgccaattttcaggtcttctttggaaagattgcagcttgatcggctcgggataggacagctgcattggtctactgctaactatgcacctctgcaggagcgtgctctttgggatggtctagttgagatgtatgaaaaggtcaccaaacttccgattgtattgtcattgttcaatgttctgaatcccaactgtatattcagctctacaaaccatatatatctcagttaggcaaatcatatctcagttaggtacacggacagattctttggatgaagatattgtcctcctttacgttcttgatttcttagaaatttgactgcaaaatggatttcttgtagggtttggttcgtgctgtcggcgtcagcaattatgggcccaagcagcttctgaagatccacagccatctatcatctagaggtgttccattgagctcagctcaggtaccttcagaatgcccatacatcttgtacagttgtactcattcagtatagctgtaactgaaattgtcatggaatgcaggttcagttctcactactgagcatgggggatgagcagatggagctgaaaactgtgtgtgattctttgggcattcgtctgattgcttatagtccacttggattaggaatgctgacaggaaagtatactacttctaaccttccaagtggaccaaggtaacgactaatgaccaaaggaagcagacaaatatttctctctgaattttatgacaattgatgacggaaattcagttcatttgttctctggtctgcaggtctgtgttgttccggcaaattcttcctgggttggaatctctgctgacttgtctgaaaagaattgcagaaaggaaggggaagaccatgtctcaagtaagtattgctttccaagagcaaaatgacctgcataacaagtgattcatgcatagatcttgccaatctggcttcaaattatcggaacatttcatcgtatgagtgataagtttatttagctcgttgcaatacctgaatgcttcagagatgcaacacatgaagaaaactgacggtgacactgtgatctgaactcaggtggccataaattggtgcatctgcaagggcacaattcctattccaggtgtcaaaacagtcaggcacgtcgaggataacttgggagcactgggctggaggcttagccctgctgaagtttcagagctcgaagctgcagcaatggagtctccgaagagaatggtccagaacatattccaaactgcatgagcacacatatatataaggatcgctccaaccatcagtaattcagtgagagagaattagaagtgtgcatttctcctaattgagaattcatcactgtaaatacatattccagccaagtgtttcagtctgaagaatatatatagactgtgacacgcacgaagtgccataatcttactgagaaagaaggttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0517400, RefSeq:Os10g0517400