Os01g0846300

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0846300| Description = Similar to Protein phosphatase 2C| Version = NM_001051323.1 GI:115441016 GeneID:4327465| Length = 2062 bp| Definiti...")
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Gene Name

Os01g0846300

Description

Similar to Protein phosphatase 2C

Version

NM_001051323.1 GI:115441016 GeneID:4327465

Length

2062 bp

Definition

Oryza sativa Japonica Group Os01g0846300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38099795..38101856

Sequence Coding Region

38100139..38100564,38100656..38100985,38101111..38101216,38101310..38101692

Expression

GEO Profiles:Os01g0846300

Genome Context

<gbrowseImage1> name=NC_008394:38099795..38101856 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38099795..38101856 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgagatctgctgcgaggaggccatgtcgccgccggccactgccacggctgctgtcgcggcagcggtctccgcctcggccgccgcagccgtctcctcggcgatagacaggcggcgccgcaggatggagatgaggcgcatccgcatcgcaagtgatctcgagctgcaggccggagaggatgggcgccctggaaagcggcagaggctggcgcgcacggcgtctggcgccccgcgtcctgacgaggattcggcgtctgagcggccgagttgtggccgtacggaggagttcccgaggtatggggtcaccgctgtgtgcggccgccgtcgcgagatggaagacgccgtgtccatcagaccggacttcttgccggcatccggcaagttccatttttacggcgtcttcgacggccatggctgctcccatgttgcgacgacgtgccaggacaggatgcacgagattgtcgccgaggagcacaacaagggggcctccggcgaagtggcgccttggagggatgtgatggagaagagcttcgcgcggatggatggggaggtcggtaaccgggcgtccacccgcagcgacgacgagcccgcctgcccgtgcgagcagcagacgccttcgcgtcgcgaccacgcgggttccaccgccgtcgtcgccgtcgttagcccaacacaggtcgtcgtcgccaacgccggcgactcccgcgccgtcatctcccgtgccggcgtccccgtcgcactatccgttgaccacaaacccgatcggcccgacgagctggaacgaatcgaggcggcgggcggccgcgtcatttactgggacggcgcccgggtgctcggcgtcctcgccatgtctcgagccatcggggatgggtaccttaagccgtacgtgacgtcggagccggaggtgaccgtgacggagcgcaccgacgacgatgagtgcctgatcctggccagcgacgggctatgggacgtcgtgaccaacgagatggcgtgtgaggtcgtgagggcgtgcttccacaacaacggtccgccggcaccggccgcgcggccgagcggcgtgccctcctcggccgaggcggcggaaaccgagaacggaggagccgcatcggtgaaggggataagcaaggcggagtcctccgacaaggcgtgctccgacgcggccatgctgctgacgaagttggcgctggcgcggcggagcgcggacaatgtcagcgtcgtcgtcgtagatctccgccggggattgtga</cdnaseq>

Protein Sequence

<aaseq>MAEICCEEAMSPPATATAAVAAAVSASAAAAVSSAIDRRRRRME MRRIRIASDLELQAGEDGRPGKRQRLARTASGAPRPDEDSASERPSCGRTEEFPRYGV TAVCGRRREMEDAVSIRPDFLPASGKFHFYGVFDGHGCSHVATTCQDRMHEIVAEEHN KGASGEVAPWRDVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAGSTAVV AVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGAR VLGVLAMSRAIGDGYLKPYVTSEPEVTVTERTDDDECLILASDGLWDVVTNEMACEVV RACFHNNGPPAPAARPSGVPSSAEAAETENGGAASVKGISKAESSDKACSDAAMLLTK LALARRSADNVSVVVVDLRRGL</aaseq>

Gene Sequence

<dnaseqindica>345..770#862..1191#1317..1422#1516..1898#ccttctcttctactccccccaccacccccgccttcgtgcttgcgtgtcgtcgcctcacctcgcgcctccgctactactgcttgtctgctgctgcagctgctgttattaccataccgcgggagaaggggggccgaacccgaaggcgtgcgagagggaggtgaggtgaggtggagccgtggaggcgcttgtttcgcgtgcgagacggtgcttcgtttcgcctcacgttttccgagggctacggcgacttggtgggagcgcggagaaaatctagcgagccgtcggagttgggtggcgcgcggccggctgtgcttctgaaggaggagtaattggagtagttgcttgccatggccgagatctgctgcgaggaggccatgtcgccgccggccactgccacggctgctgtcgcggcagcggtctccgcctcggccgccgcagccgtctcctcggcgatagacaggcggcgccgcaggatggagatgaggcgcatccgcatcgcaagtgatctcgagctgcaggccggagaggatgggcgccctggaaagcggcagaggctggcgcgcacggcgtctggcgccccgcgtcctgacgaggattcggcgtctgagcggccgagttgtggccgtacggaggagttcccgaggtatggggtcaccgctgtgtgcggccgccgtcgcgagatggaagacgccgtgtccatcagaccggacttcttgccggcatccggcaagttccatttttacggcgtcttcgacggccatggctgctcccatgtaagtgtttgctgatgtctaaatgtgcgaaccggatagtgatctgtgcacatgtaattcagcgtgctaattcgagttctatgaatattaggttgcgacgacgtgccaggacaggatgcacgagattgtcgccgaggagcacaacaagggggcctccggcgaagtggcgccttggagggatgtgatggagaagagcttcgcgcggatggatggggaggtcggtaaccgggcgtccacccgcagcgacgacgagcccgcctgcccgtgcgagcagcagacgccttcgcgtcgcgaccacgcgggttccaccgccgtcgtcgccgtcgttagcccaacacaggtcgtcgtcgccaacgccggcgactcccgcgccgtcatctcccgtgccggcgtccccgtcgcactatccgttgaccacaaagtacgtatatgctcgcatcacagggccggctgagcctttcccgtccatctgcaaaaaatcgttagtttcttgtccatgagcgtgtgcctgacatggttgctacttgctacctcggaacggttcagcccgatcggcccgacgagctggaacgaatcgaggcggcgggcggccgcgtcatttactgggacggcgcccgggtgctcggcgtcctcgccatgtctcgagccatcggtgagctgatctagttttaccttcttctctcgtcgtctcaagaattttgatttggcacccggatccgaaactcacctgcgtatgggcgcgcaggggatgggtaccttaagccgtacgtgacgtcggagccggaggtgaccgtgacggagcgcaccgacgacgatgagtgcctgatcctggccagcgacgggctatgggacgtcgtgaccaacgagatggcgtgtgaggtcgtgagggcgtgcttccacaacaacggtccgccggcaccggccgcgcggccgagcggcgtgccctcctcggccgaggcggcggaaaccgagaacggaggagccgcatcggtgaaggggataagcaaggcggagtcctccgacaaggcgtgctccgacgcggccatgctgctgacgaagttggcgctggcgcggcggagcgcggacaatgtcagcgtcgtcgtcgtagatctccgccggggattgtgattcttggcgcaatattctatgctccatgattgctttctttcttcttcttttttttattctaagttaatttttcccttcaaatttcttccttatttctctgtttagttttagttttactactagctcctaccaagataaatgaatataatagccttttttttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0846300, RefSeq:Os01g0846300