Os01g0848700

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0848700| Description = Similar to Ras-related protein Rab11C| Version = NM_001051340.1 GI:115441050 GeneID:4324856| Length = 2523 bp| Defi...")
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Gene Name

Os01g0848700

Description

Similar to Ras-related protein Rab11C

Version

NM_001051340.1 GI:115441050 GeneID:4324856

Length

2523 bp

Definition

Oryza sativa Japonica Group Os01g0848700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38223766..38226288

Sequence Coding Region

38224064..38224549,38225943..38226107

Expression

GEO Profiles:Os01g0848700

Genome Context

<gbrowseImage1> name=NC_008394:38223766..38226288 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38223766..38226288 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcaccgggtggacaacgagtacgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaagtccaacatcctctcccgcttcacccgcaacgagttcttcctcgagtccaagtccaccatcggcgtcgagttcgccacccgcaccctgcagatagaagggaagactatcaaggctcagatatgggacacggcaggtcaagagagataccgtgcaatcacgagtgcttattacaggggtgcagttggagcacttcttgtattcgacataacaaagaggcaaaccttcgacaatgttcagaggtggctgcgggagctccgggaccatgcagacgccaacattgttgtcatgatggtcggaaacaagtctgacttaaaccatctacgatcagtccccgaggaagatggccatgcgttctctgagaaagaaggtctctccttccttgagacgtctgctctggaagcgattaatgtggagaaagcattccatactgtattgagtgaaattcaccagattgtaagcaagaaagcacttgcagctcaggaatccgcgtctacaaatgggcgttccatgcaaggaactacgatcaacgttgctgaagctccagccgccacaaaaggttcttgctgttctagttaa</cdnaseq>

Protein Sequence

<aaseq>MAHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKST IGVEFATRTLQIEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDN VQRWLRELRDHADANIVVMMVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAI NVEKAFHTVLSEIHQIVSKKALAAQESASTNGRSMQGTTINVAEAPAATKGSCCSS</aaseq>

Gene Sequence

<dnaseqindica>1740..2225#182..346#ctcgtccccccccccctctctctctctcctccccctcggatctgcctgccctctgcccccaccgtttcaaacctccattcccccaggcgcacgaaccgagagggtcaggaggcgaggatcggaggggagattttcgttcgttccagattcgggacgtgaggggaggcgggagggggagatcatggcgcaccgggtggacaacgagtacgactacctgttcaagatcgtcctcatcggcgattccggcgtcggcaagtccaacatcctctcccgcttcacccgcaacgagttcttcctcgagtccaagtccaccatcggcgtcgagttcgccacccgcaccctgcaggtacccgcgtacgcgacgcccacccgccccccccccccccctgatccccttgcttgcttgtacaattttgcgattggcgcgcgtcgtgatgtcgcgtcgggttcttgtgcgttaggaattgagatcccggatccatgactgcagactcggacacccacaggatttttatggtcgcgtgattgggctgacaatggcaatacggcactttgtttgtttgcatgatatcgcggtgatggtaccggtggtaatgccgcgcatatttcttttatgttttcgcgagttccttgtgttggagatgatagagattagagaacggatatacgtgtcatttctaggttaacactagattgtcaattctttcgagcaatcctattcatgcaggcattttgttccctcttggtccttcctagcaatgcaaatacgagagtagattatatgccaaaagtacattatgttaagaaatgccaaaaatacgagtagattcatcatacttttatactacattggaggaaaaatgctaccgcaccaatatgctggccttccaacgtcaatttcgtcaaagaggttatgtcaatccctgccggattcataatcctaatgcataatagctgttgtgggcaacatagattgactagtatgaccatcttctccgtttggttggcatagcactgatcattgtattgtctctgaattaattgcattcagatgacttcatcacttccataccatttatgtgcagttattataaggctggaaatgtcttttttgttttttttttctcagtccttacattccttgagcacaaccatgtcattatgctctgttttgtccttcctgatcctcttctgagagtatcaataattagacaaagaaggttatatctattactttttgtttgatcaaacattttaagtgatttttttttgtttctagcacgccatcactttctttttgcagcatttcagcttttaatacatatacatcagtaaatggaaaagaataacatgggttaaactttaacccaaatttttaaagaatcttgtaagcctgtgacacaattcttcaatcagcattcagtaattgggattgcagtgcagtttgtagttgccaccaatgttagtgtggtataactatatttgttgattaatcaattgatatatacccttcaaccatagatcttcccatgtccaatcaaagaaaaaaatatattgttcttagtactgatttgtttgtatattgtcatgaagacattttcatcatgttaaagtcaccataattgttattgccaatcatagatctggaatgctatccatttttctctgtttatgattatgctgaagccatacgtgtctacagttcatctcagtaaaagtctactattgtcttgagacagatagaagggaagactatcaaggctcagatatgggacacggcaggtcaagagagataccgtgcaatcacgagtgcttattacaggggtgcagttggagcacttcttgtattcgacataacaaagaggcaaaccttcgacaatgttcagaggtggctgcgggagctccgggaccatgcagacgccaacattgttgtcatgatggtcggaaacaagtctgacttaaaccatctacgatcagtccccgaggaagatggccatgcgttctctgagaaagaaggtctctccttccttgagacgtctgctctggaagcgattaatgtggagaaagcattccatactgtattgagtgaaattcaccagattgtaagcaagaaagcacttgcagctcaggaatccgcgtctacaaatgggcgttccatgcaaggaactacgatcaacgttgctgaagctccagccgccacaaaaggttcttgctgttctagttaaaaaagacttttctaaaggaaaagatctttcgaagcgtttgtttttgcagaactgcagaaccaaataggctaatactggtttcacataatctgtcttctcataccgaagcccatgactggtactccttatcacaaggaacatttctaccgtacactataacctgcctgaatcaaaacatttccattttgtatttatgaattaacttaccatggcatccgcttgtatactttgggggaattgaagagcattgtactatgtaacactgattctttcctagtaacaaaatattctttccagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0848700, RefSeq:Os01g0848700