Os01g0850000

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0850000| Description = Conserved hypothetical protein| Version = NM_001051346.1 GI:115441062 GeneID:4324862| Length = 1800 bp| Definition ...")
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Gene Name

Os01g0850000

Description

Conserved hypothetical protein

Version

NM_001051346.1 GI:115441062 GeneID:4324862

Length

1800 bp

Definition

Oryza sativa Japonica Group Os01g0850000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38283889..38285688

Sequence Coding Region

38283950..38284153,38284247..38284597,38284690..38284981,38285079..38285186,38285273..38285409

Expression

GEO Profiles:Os01g0850000

Genome Context

<gbrowseImage1> name=NC_008394:38283889..38285688 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38283889..38285688 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggtgtgcacccctggcgccgccgaggcggagttgtggctccccgacgagttcttggacgatgatttcttcaccgtggaggagaaggcggcggttgcggccaagagcgagagcgacgaggaggacgggttggatggcctcgcgcgacgcatggccgacctcctcgccggcgagggtggaaagggaacgggttccaaggtggaggtgatggcggggtcgccgcagtcgacgctgtgcgggttggcggcttccggggaggatagccccaacggcggtgcgtcgcagttcagctcgccgccgtcgtcgccgctggagcagccgccgacggacccttgggacgttctctccgaggctgccgggcaggttgctcgcctgcgcatgaacagcatcccggtgccccagaagccccatgcgcatgccggccatggccgcttcgtcccacctgcgagaaacccgtctccgccggtgcaagcccagaagaccgccggtgccttccagttcgcgcccaacaacaacatgctcacccaacgccaggttcaagtcgctcatttccacctcctgaagcagaggcagctgttgaagcagcaacgggagcagcagctcgccgcggcagcagcggcggcgtggggaacgcaccgcgccggcgtcggcgtcggcgcgccgcttggtctgaactcctccggctggccaccgctgcagaaggcccaccagcaggcgtcgtccgcggccggcatgcgcgccgtgttcctcagccctcccggcggcaaaacggaacgcacgggcaccggcgtgttcatcccccgccaggccggcgcccccgccgagcccaagaaaaagccaagctgctccaccgtgcttctgcccgcgcgcgtcgtgcaggccctcaacctcaacgtcgacgatcttggtgcccgtccttgctttcccggcggtttcgttctcgaccacgacgctctggtcagtcggagcaatgcaatgctcaccacccagaagcgggtgcagcaccacctccacgcggccaccgcggcgccgcctacgcttgccgctgcgcgcgaggtgaatcttccccaggaatggacatactga</cdnaseq>

Protein Sequence

<aaseq>MAEVCTPGAAEAELWLPDEFLDDDFFTVEEKAAVAAKSESDEED GLDGLARRMADLLAGEGGKGTGSKVEVMAGSPQSTLCGLAASGEDSPNGGASQFSSPP SSPLEQPPTDPWDVLSEAAGQVARLRMNSIPVPQKPHAHAGHGRFVPPARNPSPPVQA QKTAGAFQFAPNNNMLTQRQVQVAHFHLLKQRQLLKQQREQQLAAAAAAAWGTHRAGV GVGAPLGLNSSGWPPLQKAHQQASSAAGMRAVFLSPPGGKTERTGTGVFIPRQAGAPA EPKKKPSCSTVLLPARVVQALNLNVDDLGARPCFPGGFVLDHDALVSRSNAMLTTQKR VQHHLHAATAAPPTLAAAREVNLPQEWTY</aaseq>

Gene Sequence

<dnaseqindica>62..265#359..709#802..1093#1191..1298#1385..1521#gtgttccgtccacgcttgcagcagccgcgcggacggaaggggttgtgttttcgtgggccaaatggcggaggtgtgcacccctggcgccgccgaggcggagttgtggctccccgacgagttcttggacgatgatttcttcaccgtggaggagaaggcggcggttgcggccaagagcgagagcgacgaggaggacgggttggatggcctcgcgcgacgcatggccgacctcctcgccggcgagggtggaaagggaacgggttccaaggttggttggtgtctcgtttggccttgttcgacatgctttgtgtttgcgccttcgttgtagcgaaatctgatcgtgttcttttgtttgtgacaggtggaggtgatggcggggtcgccgcagtcgacgctgtgcgggttggcggcttccggggaggatagccccaacggcggtgcgtcgcagttcagctcgccgccgtcgtcgccgctggagcagccgccgacggacccttgggacgttctctccgaggctgccgggcaggttgctcgcctgcgcatgaacagcatcccggtgccccagaagccccatgcgcatgccggccatggccgcttcgtcccacctgcgagaaacccgtctccgccggtgcaagcccagaagaccgccggtgccttccagttcgcgcccaacaacaacatgctcacccaacgccaggttcaagtcgctcatgtaagttctttcgccataaatcaactgttccatgcctttctgtttgattttgtgactgttctgatgttctgttcgtctccgcctgtttccagttccacctcctgaagcagaggcagctgttgaagcagcaacgggagcagcagctcgccgcggcagcagcggcggcgtggggaacgcaccgcgccggcgtcggcgtcggcgcgccgcttggtctgaactcctccggctggccaccgctgcagaaggcccaccagcaggcgtcgtccgcggccggcatgcgcgccgtgttcctcagccctcccggcggcaaaacggaacgcacgggcaccggcgtgttcatcccccgccaggccggcgcccccgccgagcccaagaaaaagccaagtgcgcacctcctccgaacctcttcctttacctgcccttttttgcgtgagtcgcgccgtattttgggctaaaattctgcggctctgcttgccttcaggctgctccaccgtgcttctgcccgcgcgcgtcgtgcaggccctcaacctcaacgtcgacgatcttggtgcccgtccttgctttcccggcggtttcgttctcgaccacggtaagttcactccacgcctacaatttttatgttacggttcaccaatgagtagtactcctgacagtttcctgattcatttctcacagacgctctggtcagtcggagcaatgcaatgctcaccacccagaagcgggtgcagcaccacctccacgcggccaccgcggcgccgcctacgcttgccgctgcgcgcgaggtgaatcttccccaggaatggacatactgaggcgcagatttgcttcgttcgtctgttctaatcccagtttaatggatcatatttaagaattattactgctactattattagtgctaggtaggtgttaggctagaattaggaatggcattggcagtagcatcagtgttaggtgttcttttgtatggtgatatattggttattttggaaggtgggtgatggatgcagatcaacagatgagaaatacatggcttccgtaggttgttcagggtattgacggtgatatatccaataataagtgttcttttggag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0850000, RefSeq:Os01g0850000